Protein–RNA interactions for Protein: Q8IYR6

TMEFF1, Tomoregulin-1, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1Q8IYR6 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TMEFF1Q8IYR6 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC19.87■□□□□ 0.77
TMEFF1Q8IYR6 KRT18P22-201ENST00000402024 1347 ntBASIC19.87■□□□□ 0.77
TMEFF1Q8IYR6 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC19.87■□□□□ 0.77
TMEFF1Q8IYR6 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC19.87■□□□□ 0.77
TMEFF1Q8IYR6 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC19.87■□□□□ 0.77
TMEFF1Q8IYR6 AL137013.1-201ENST00000432946 1228 ntBASIC19.87■□□□□ 0.77
TMEFF1Q8IYR6 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC19.87■□□□□ 0.77
TMEFF1Q8IYR6 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC19.87■□□□□ 0.77
TMEFF1Q8IYR6 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC19.87■□□□□ 0.77
TMEFF1Q8IYR6 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
TMEFF1Q8IYR6 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC19.86■□□□□ 0.77
TMEFF1Q8IYR6 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
TMEFF1Q8IYR6 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC19.86■□□□□ 0.77
TMEFF1Q8IYR6 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC19.86■□□□□ 0.77
TMEFF1Q8IYR6 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
TMEFF1Q8IYR6 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TMEFF1Q8IYR6 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC19.86■□□□□ 0.77
TMEFF1Q8IYR6 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
TMEFF1Q8IYR6 KSR1P1-201ENST00000446298 240 ntBASIC19.86■□□□□ 0.77
TMEFF1Q8IYR6 AC116562.2-201ENST00000507042 360 ntBASIC19.86■□□□□ 0.77
TMEFF1Q8IYR6 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC19.86■□□□□ 0.77
TMEFF1Q8IYR6 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC19.86■□□□□ 0.77
TMEFF1Q8IYR6 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
TMEFF1Q8IYR6 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC19.86■□□□□ 0.77
TMEFF1Q8IYR6 FITM1-202ENST00000559294 800 ntBASIC19.86■□□□□ 0.77
TMEFF1Q8IYR6 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC19.86■□□□□ 0.77
TMEFF1Q8IYR6 AC010947.1-201ENST00000623454 693 ntBASIC19.86■□□□□ 0.77
TMEFF1Q8IYR6 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TMEFF1Q8IYR6 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
TMEFF1Q8IYR6 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
TMEFF1Q8IYR6 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TMEFF1Q8IYR6 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC19.85■□□□□ 0.77
TMEFF1Q8IYR6 TERF1P1-201ENST00000311003 1181 ntBASIC19.85■□□□□ 0.77
TMEFF1Q8IYR6 NIFKP9-201ENST00000419265 221 ntBASIC19.85■□□□□ 0.77
TMEFF1Q8IYR6 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC19.85■□□□□ 0.77
TMEFF1Q8IYR6 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC19.85■□□□□ 0.77
TMEFF1Q8IYR6 TPM1-226ENST00000560959 925 ntTSL 2 BASIC19.85■□□□□ 0.77
TMEFF1Q8IYR6 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC19.85■□□□□ 0.77
TMEFF1Q8IYR6 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
TMEFF1Q8IYR6 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
TMEFF1Q8IYR6 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
TMEFF1Q8IYR6 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
TMEFF1Q8IYR6 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TMEFF1Q8IYR6 KRT16P1-201ENST00000399124 1418 ntBASIC19.85■□□□□ 0.77
TMEFF1Q8IYR6 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC19.84■□□□□ 0.77
TMEFF1Q8IYR6 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC19.84■□□□□ 0.77
TMEFF1Q8IYR6 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
TMEFF1Q8IYR6 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TMEFF1Q8IYR6 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC19.84■□□□□ 0.77
TMEFF1Q8IYR6 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.84■□□□□ 0.77
TMEFF1Q8IYR6 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TMEFF1Q8IYR6 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
TMEFF1Q8IYR6 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TMEFF1Q8IYR6 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TMEFF1Q8IYR6 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.84■□□□□ 0.77
TMEFF1Q8IYR6 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC19.84■□□□□ 0.77
TMEFF1Q8IYR6 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TMEFF1Q8IYR6 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.84■□□□□ 0.77
TMEFF1Q8IYR6 RNF146-204ENST00000476956 884 ntTSL 2 BASIC19.84■□□□□ 0.77
TMEFF1Q8IYR6 TMA16-209ENST00000513272 803 ntTSL 2 BASIC19.84■□□□□ 0.77
TMEFF1Q8IYR6 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC19.84■□□□□ 0.77
TMEFF1Q8IYR6 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC19.84■□□□□ 0.77
TMEFF1Q8IYR6 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC19.84■□□□□ 0.77
TMEFF1Q8IYR6 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC19.84■□□□□ 0.77
TMEFF1Q8IYR6 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
TMEFF1Q8IYR6 NME3-204ENST00000563498 920 ntTSL 2 BASIC19.84■□□□□ 0.77
TMEFF1Q8IYR6 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC19.84■□□□□ 0.77
TMEFF1Q8IYR6 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC19.84■□□□□ 0.77
TMEFF1Q8IYR6 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
TMEFF1Q8IYR6 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TMEFF1Q8IYR6 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TMEFF1Q8IYR6 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
TMEFF1Q8IYR6 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC19.84■□□□□ 0.77
TMEFF1Q8IYR6 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC19.84■□□□□ 0.77
TMEFF1Q8IYR6 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC19.83■□□□□ 0.77
TMEFF1Q8IYR6 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
TMEFF1Q8IYR6 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
TMEFF1Q8IYR6 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC19.83■□□□□ 0.77
TMEFF1Q8IYR6 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
TMEFF1Q8IYR6 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC19.83■□□□□ 0.77
TMEFF1Q8IYR6 CFL2-205ENST00000555765 632 ntTSL 2 BASIC19.83■□□□□ 0.77
TMEFF1Q8IYR6 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC19.83■□□□□ 0.77
TMEFF1Q8IYR6 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
TMEFF1Q8IYR6 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
TMEFF1Q8IYR6 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
TMEFF1Q8IYR6 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC19.83■□□□□ 0.76
TMEFF1Q8IYR6 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
TMEFF1Q8IYR6 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
TMEFF1Q8IYR6 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TMEFF1Q8IYR6 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC19.82■□□□□ 0.76
TMEFF1Q8IYR6 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
TMEFF1Q8IYR6 CRAT-202ENST00000393384 973 ntTSL 2 BASIC19.82■□□□□ 0.76
TMEFF1Q8IYR6 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC19.82■□□□□ 0.76
TMEFF1Q8IYR6 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC19.82■□□□□ 0.76
TMEFF1Q8IYR6 SLC25A3P1-201ENST00000443844 931 ntBASIC19.82■□□□□ 0.76
TMEFF1Q8IYR6 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
TMEFF1Q8IYR6 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC19.82■□□□□ 0.76
TMEFF1Q8IYR6 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TMEFF1Q8IYR6 PTBP1P-201ENST00000554374 1601 ntBASIC19.82■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 68.4 ms