Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CCDC50Q8IVM0 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC21■□□□□ 0.95
CCDC50Q8IVM0 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC21■□□□□ 0.95
CCDC50Q8IVM0 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC21■□□□□ 0.95
CCDC50Q8IVM0 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC21■□□□□ 0.95
CCDC50Q8IVM0 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC20.99■□□□□ 0.95
CCDC50Q8IVM0 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC50Q8IVM0 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC20.99■□□□□ 0.95
CCDC50Q8IVM0 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC50Q8IVM0 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC50Q8IVM0 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC20.99■□□□□ 0.95
CCDC50Q8IVM0 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC50Q8IVM0 AC016769.1-201ENST00000409132 1010 ntBASIC20.99■□□□□ 0.95
CCDC50Q8IVM0 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC50Q8IVM0 PBX1-209ENST00000485769 834 ntTSL 2 BASIC20.99■□□□□ 0.95
CCDC50Q8IVM0 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC20.99■□□□□ 0.95
CCDC50Q8IVM0 AC016405.3-201ENST00000607710 860 ntBASIC20.99■□□□□ 0.95
CCDC50Q8IVM0 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC20.99■□□□□ 0.95
CCDC50Q8IVM0 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC50Q8IVM0 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
CCDC50Q8IVM0 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC50Q8IVM0 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC50Q8IVM0 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
CCDC50Q8IVM0 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC50Q8IVM0 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC50Q8IVM0 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
CCDC50Q8IVM0 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC50Q8IVM0 AL691432.2-201ENST00000607222 2038 ntBASIC20.99■□□□□ 0.95
CCDC50Q8IVM0 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC50Q8IVM0 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC50Q8IVM0 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CCDC50Q8IVM0 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
CCDC50Q8IVM0 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC20.98■□□□□ 0.95
CCDC50Q8IVM0 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CCDC50Q8IVM0 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CCDC50Q8IVM0 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CCDC50Q8IVM0 BX119927.1-201ENST00000636596 1552 ntBASIC20.98■□□□□ 0.95
CCDC50Q8IVM0 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CCDC50Q8IVM0 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CCDC50Q8IVM0 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC20.98■□□□□ 0.95
CCDC50Q8IVM0 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CCDC50Q8IVM0 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC20.98■□□□□ 0.95
CCDC50Q8IVM0 KRT18P5-201ENST00000436075 1291 ntBASIC20.98■□□□□ 0.95
CCDC50Q8IVM0 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC20.98■□□□□ 0.95
CCDC50Q8IVM0 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CCDC50Q8IVM0 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CCDC50Q8IVM0 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC20.98■□□□□ 0.95
CCDC50Q8IVM0 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC20.98■□□□□ 0.95
CCDC50Q8IVM0 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC20.98■□□□□ 0.95
CCDC50Q8IVM0 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC20.98■□□□□ 0.95
CCDC50Q8IVM0 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CCDC50Q8IVM0 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
CCDC50Q8IVM0 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
CCDC50Q8IVM0 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CCDC50Q8IVM0 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
CCDC50Q8IVM0 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
CCDC50Q8IVM0 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CCDC50Q8IVM0 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC20.98■□□□□ 0.95
CCDC50Q8IVM0 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CCDC50Q8IVM0 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC20.98■□□□□ 0.95
CCDC50Q8IVM0 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC20.97■□□□□ 0.95
CCDC50Q8IVM0 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC20.97■□□□□ 0.95
CCDC50Q8IVM0 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC50Q8IVM0 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC20.97■□□□□ 0.95
CCDC50Q8IVM0 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
CCDC50Q8IVM0 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC50Q8IVM0 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC50Q8IVM0 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC50Q8IVM0 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC50Q8IVM0 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
CCDC50Q8IVM0 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC50Q8IVM0 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
CCDC50Q8IVM0 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC50Q8IVM0 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC50Q8IVM0 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC20.97■□□□□ 0.95
CCDC50Q8IVM0 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
CCDC50Q8IVM0 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC50Q8IVM0 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC50Q8IVM0 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC50Q8IVM0 H19-201ENST00000411754 1788 ntTSL 5 BASIC20.97■□□□□ 0.95
CCDC50Q8IVM0 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC50Q8IVM0 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC50Q8IVM0 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC50Q8IVM0 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC50Q8IVM0 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
CCDC50Q8IVM0 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC50Q8IVM0 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC50Q8IVM0 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC50Q8IVM0 HSCB-202ENST00000398941 955 ntTSL 2 BASIC20.96■□□□□ 0.95
CCDC50Q8IVM0 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
CCDC50Q8IVM0 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC20.96■□□□□ 0.95
CCDC50Q8IVM0 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC20.96■□□□□ 0.95
CCDC50Q8IVM0 AC007322.4-201ENST00000509611 723 ntBASIC20.96■□□□□ 0.95
CCDC50Q8IVM0 MFSD11-216ENST00000590393 1141 ntBASIC20.96■□□□□ 0.95
CCDC50Q8IVM0 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
CCDC50Q8IVM0 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC50Q8IVM0 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC50Q8IVM0 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC50Q8IVM0 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC20.96■□□□□ 0.95
CCDC50Q8IVM0 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 12.8 ms