Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
ZNF549Q6P9A3 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
ZNF549Q6P9A3 KRT8P20-201ENST00000423953 1409 ntBASIC19.78■□□□□ 0.76
ZNF549Q6P9A3 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
ZNF549Q6P9A3 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC19.78■□□□□ 0.76
ZNF549Q6P9A3 AC083906.2-201ENST00000511578 360 ntBASIC19.78■□□□□ 0.76
ZNF549Q6P9A3 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC19.78■□□□□ 0.76
ZNF549Q6P9A3 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
ZNF549Q6P9A3 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
ZNF549Q6P9A3 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
ZNF549Q6P9A3 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
ZNF549Q6P9A3 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
ZNF549Q6P9A3 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
ZNF549Q6P9A3 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC19.78■□□□□ 0.76
ZNF549Q6P9A3 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
ZNF549Q6P9A3 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC19.78■□□□□ 0.76
ZNF549Q6P9A3 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
ZNF549Q6P9A3 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC19.78■□□□□ 0.76
ZNF549Q6P9A3 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
ZNF549Q6P9A3 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
ZNF549Q6P9A3 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
ZNF549Q6P9A3 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
ZNF549Q6P9A3 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
ZNF549Q6P9A3 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
ZNF549Q6P9A3 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
ZNF549Q6P9A3 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
ZNF549Q6P9A3 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
ZNF549Q6P9A3 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC19.77■□□□□ 0.76
ZNF549Q6P9A3 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
ZNF549Q6P9A3 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
ZNF549Q6P9A3 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
ZNF549Q6P9A3 PPP1R14BP3-201ENST00000509033 445 ntBASIC19.77■□□□□ 0.76
ZNF549Q6P9A3 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC19.77■□□□□ 0.76
ZNF549Q6P9A3 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
ZNF549Q6P9A3 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
ZNF549Q6P9A3 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
ZNF549Q6P9A3 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
ZNF549Q6P9A3 AL158211.5-201ENST00000623583 2518 ntBASIC19.77■□□□□ 0.76
ZNF549Q6P9A3 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
ZNF549Q6P9A3 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC19.77■□□□□ 0.75
ZNF549Q6P9A3 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
ZNF549Q6P9A3 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
ZNF549Q6P9A3 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
ZNF549Q6P9A3 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.75
ZNF549Q6P9A3 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC19.77■□□□□ 0.75
ZNF549Q6P9A3 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
ZNF549Q6P9A3 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
ZNF549Q6P9A3 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
ZNF549Q6P9A3 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC19.76■□□□□ 0.75
ZNF549Q6P9A3 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
ZNF549Q6P9A3 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC19.76■□□□□ 0.75
ZNF549Q6P9A3 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC19.76■□□□□ 0.75
ZNF549Q6P9A3 GUSBP6-202ENST00000438529 1198 ntBASIC19.76■□□□□ 0.75
ZNF549Q6P9A3 AC006970.2-201ENST00000450065 779 ntBASIC19.76■□□□□ 0.75
ZNF549Q6P9A3 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC19.76■□□□□ 0.75
ZNF549Q6P9A3 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC19.76■□□□□ 0.75
ZNF549Q6P9A3 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC19.76■□□□□ 0.75
ZNF549Q6P9A3 AL121832.2-201ENST00000610979 668 ntBASIC19.76■□□□□ 0.75
ZNF549Q6P9A3 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC19.76■□□□□ 0.75
ZNF549Q6P9A3 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
ZNF549Q6P9A3 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC19.76■□□□□ 0.75
ZNF549Q6P9A3 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
ZNF549Q6P9A3 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
ZNF549Q6P9A3 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
ZNF549Q6P9A3 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC19.75■□□□□ 0.75
ZNF549Q6P9A3 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC19.75■□□□□ 0.75
ZNF549Q6P9A3 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ZNF549Q6P9A3 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
ZNF549Q6P9A3 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ZNF549Q6P9A3 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
ZNF549Q6P9A3 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ZNF549Q6P9A3 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
ZNF549Q6P9A3 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
ZNF549Q6P9A3 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
ZNF549Q6P9A3 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
ZNF549Q6P9A3 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ZNF549Q6P9A3 GPX1P1-201ENST00000388829 606 ntBASIC19.75■□□□□ 0.75
ZNF549Q6P9A3 MIPEPP3-201ENST00000412105 444 ntBASIC19.75■□□□□ 0.75
ZNF549Q6P9A3 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC19.75■□□□□ 0.75
ZNF549Q6P9A3 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ZNF549Q6P9A3 AC023632.3-201ENST00000521633 145 ntBASIC19.75■□□□□ 0.75
ZNF549Q6P9A3 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
ZNF549Q6P9A3 WT1-AS_3.1-201ENST00000613262 234 ntBASIC19.75■□□□□ 0.75
ZNF549Q6P9A3 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ZNF549Q6P9A3 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ZNF549Q6P9A3 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ZNF549Q6P9A3 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
ZNF549Q6P9A3 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ZNF549Q6P9A3 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ZNF549Q6P9A3 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ZNF549Q6P9A3 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
ZNF549Q6P9A3 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC19.74■□□□□ 0.75
ZNF549Q6P9A3 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
ZNF549Q6P9A3 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC19.74■□□□□ 0.75
ZNF549Q6P9A3 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC19.74■□□□□ 0.75
ZNF549Q6P9A3 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
ZNF549Q6P9A3 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
ZNF549Q6P9A3 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC19.74■□□□□ 0.75
ZNF549Q6P9A3 NCF1B-203ENST00000435988 1254 ntBASIC19.74■□□□□ 0.75
ZNF549Q6P9A3 MAP2K4P1-201ENST00000438453 1195 ntBASIC19.74■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms