Protein–RNA interactions for Protein: Q6ICC9

RTL6, Retrotransposon Gag-like protein 6, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL6Q6ICC9 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC18■□□□□ 0.47
RTL6Q6ICC9 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
RTL6Q6ICC9 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
RTL6Q6ICC9 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
RTL6Q6ICC9 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
RTL6Q6ICC9 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
RTL6Q6ICC9 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RTL6Q6ICC9 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RTL6Q6ICC9 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
RTL6Q6ICC9 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
RTL6Q6ICC9 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RTL6Q6ICC9 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
RTL6Q6ICC9 MDFI-202ENST00000373050 809 ntTSL 2 BASIC17.99■□□□□ 0.47
RTL6Q6ICC9 KRASP1-201ENST00000407852 552 ntBASIC17.99■□□□□ 0.47
RTL6Q6ICC9 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
RTL6Q6ICC9 REXO2-216ENST00000544196 452 ntTSL 3 BASIC17.99■□□□□ 0.47
RTL6Q6ICC9 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
RTL6Q6ICC9 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC17.99■□□□□ 0.47
RTL6Q6ICC9 AC110285.5-201ENST00000611501 352 ntBASIC17.99■□□□□ 0.47
RTL6Q6ICC9 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RTL6Q6ICC9 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
RTL6Q6ICC9 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
RTL6Q6ICC9 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC17.99■□□□□ 0.47
RTL6Q6ICC9 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC17.99■□□□□ 0.47
RTL6Q6ICC9 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC17.99■□□□□ 0.47
RTL6Q6ICC9 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RTL6Q6ICC9 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
RTL6Q6ICC9 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RTL6Q6ICC9 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RTL6Q6ICC9 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
RTL6Q6ICC9 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RTL6Q6ICC9 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC17.98■□□□□ 0.47
RTL6Q6ICC9 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
RTL6Q6ICC9 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RTL6Q6ICC9 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RTL6Q6ICC9 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC17.98■□□□□ 0.47
RTL6Q6ICC9 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC17.98■□□□□ 0.47
RTL6Q6ICC9 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RTL6Q6ICC9 RPS2P55-201ENST00000397318 883 ntBASIC17.98■□□□□ 0.47
RTL6Q6ICC9 AC012618.2-201ENST00000428058 849 ntBASIC17.98■□□□□ 0.47
RTL6Q6ICC9 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC17.98■□□□□ 0.47
RTL6Q6ICC9 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
RTL6Q6ICC9 AC107956.1-201ENST00000494359 873 ntBASIC17.98■□□□□ 0.47
RTL6Q6ICC9 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
RTL6Q6ICC9 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC17.98■□□□□ 0.47
RTL6Q6ICC9 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC17.98■□□□□ 0.47
RTL6Q6ICC9 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC17.98■□□□□ 0.47
RTL6Q6ICC9 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC17.98■□□□□ 0.47
RTL6Q6ICC9 AC233702.5-201ENST00000584107 538 ntBASIC17.98■□□□□ 0.47
RTL6Q6ICC9 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
RTL6Q6ICC9 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC17.98■□□□□ 0.47
RTL6Q6ICC9 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RTL6Q6ICC9 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
RTL6Q6ICC9 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RTL6Q6ICC9 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
RTL6Q6ICC9 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RTL6Q6ICC9 AC121338.2-201ENST00000622535 1744 ntBASIC17.98■□□□□ 0.47
RTL6Q6ICC9 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RTL6Q6ICC9 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RTL6Q6ICC9 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RTL6Q6ICC9 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC17.97■□□□□ 0.47
RTL6Q6ICC9 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
RTL6Q6ICC9 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RTL6Q6ICC9 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
RTL6Q6ICC9 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RTL6Q6ICC9 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
RTL6Q6ICC9 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
RTL6Q6ICC9 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC17.97■□□□□ 0.47
RTL6Q6ICC9 AC023632.3-201ENST00000521633 145 ntBASIC17.97■□□□□ 0.47
RTL6Q6ICC9 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC17.97■□□□□ 0.47
RTL6Q6ICC9 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC17.97■□□□□ 0.47
RTL6Q6ICC9 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC17.97■□□□□ 0.47
RTL6Q6ICC9 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC17.97■□□□□ 0.47
RTL6Q6ICC9 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
RTL6Q6ICC9 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC17.97■□□□□ 0.47
RTL6Q6ICC9 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC17.97■□□□□ 0.47
RTL6Q6ICC9 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC17.97■□□□□ 0.47
RTL6Q6ICC9 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
RTL6Q6ICC9 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RTL6Q6ICC9 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
RTL6Q6ICC9 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
RTL6Q6ICC9 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
RTL6Q6ICC9 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC17.96■□□□□ 0.47
RTL6Q6ICC9 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC17.96■□□□□ 0.47
RTL6Q6ICC9 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RTL6Q6ICC9 AC073130.3-201ENST00000624389 2278 ntBASIC17.96■□□□□ 0.47
RTL6Q6ICC9 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RTL6Q6ICC9 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RTL6Q6ICC9 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RTL6Q6ICC9 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
RTL6Q6ICC9 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
RTL6Q6ICC9 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC17.96■□□□□ 0.47
RTL6Q6ICC9 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC17.96■□□□□ 0.47
RTL6Q6ICC9 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC17.96■□□□□ 0.47
RTL6Q6ICC9 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
RTL6Q6ICC9 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC17.96■□□□□ 0.47
RTL6Q6ICC9 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC17.96■□□□□ 0.47
RTL6Q6ICC9 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RTL6Q6ICC9 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RTL6Q6ICC9 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC17.96■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms