Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC13.5□□□□□ -0.25
VPS13DQ5THJ4 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC13.5□□□□□ -0.25
VPS13DQ5THJ4 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
VPS13DQ5THJ4 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
VPS13DQ5THJ4 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
VPS13DQ5THJ4 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
VPS13DQ5THJ4 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
VPS13DQ5THJ4 UPK3BP1-201ENST00000428678 509 ntBASIC13.5□□□□□ -0.25
VPS13DQ5THJ4 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC13.5□□□□□ -0.25
VPS13DQ5THJ4 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC13.5□□□□□ -0.25
VPS13DQ5THJ4 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
VPS13DQ5THJ4 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
VPS13DQ5THJ4 PARN-205ENST00000539279 1557 ntTSL 2 BASIC13.5□□□□□ -0.25
VPS13DQ5THJ4 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
VPS13DQ5THJ4 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC13.5□□□□□ -0.25
VPS13DQ5THJ4 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC13.5□□□□□ -0.25
VPS13DQ5THJ4 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
VPS13DQ5THJ4 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC13.5□□□□□ -0.25
VPS13DQ5THJ4 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
VPS13DQ5THJ4 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC13.5□□□□□ -0.25
VPS13DQ5THJ4 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
VPS13DQ5THJ4 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC13.5□□□□□ -0.25
VPS13DQ5THJ4 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
VPS13DQ5THJ4 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC13.5□□□□□ -0.25
VPS13DQ5THJ4 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC13.5□□□□□ -0.25
VPS13DQ5THJ4 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC13.5□□□□□ -0.25
VPS13DQ5THJ4 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
VPS13DQ5THJ4 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
VPS13DQ5THJ4 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
VPS13DQ5THJ4 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
VPS13DQ5THJ4 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC13.49□□□□□ -0.25
VPS13DQ5THJ4 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC13.49□□□□□ -0.25
VPS13DQ5THJ4 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC13.49□□□□□ -0.25
VPS13DQ5THJ4 FSCN1P1-201ENST00000568912 1481 ntBASIC13.49□□□□□ -0.25
VPS13DQ5THJ4 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
VPS13DQ5THJ4 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
VPS13DQ5THJ4 AL024507.2-201ENST00000606070 2574 ntBASIC13.49□□□□□ -0.25
VPS13DQ5THJ4 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
VPS13DQ5THJ4 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
VPS13DQ5THJ4 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
VPS13DQ5THJ4 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
VPS13DQ5THJ4 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
VPS13DQ5THJ4 C1QL1P1-201ENST00000568105 661 ntBASIC13.49□□□□□ -0.25
VPS13DQ5THJ4 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
VPS13DQ5THJ4 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
VPS13DQ5THJ4 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
VPS13DQ5THJ4 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
VPS13DQ5THJ4 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
VPS13DQ5THJ4 MFAP1P1-201ENST00000442257 1255 ntBASIC13.49□□□□□ -0.25
VPS13DQ5THJ4 KSR1P1-201ENST00000446298 240 ntBASIC13.49□□□□□ -0.25
VPS13DQ5THJ4 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC13.49□□□□□ -0.25
VPS13DQ5THJ4 AC087388.1-201ENST00000571370 1112 ntBASIC13.49□□□□□ -0.25
VPS13DQ5THJ4 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
VPS13DQ5THJ4 AC130371.2-201ENST00000619443 611 ntBASIC13.49□□□□□ -0.25
VPS13DQ5THJ4 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
VPS13DQ5THJ4 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC13.49□□□□□ -0.25
VPS13DQ5THJ4 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
VPS13DQ5THJ4 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
VPS13DQ5THJ4 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
VPS13DQ5THJ4 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
VPS13DQ5THJ4 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
VPS13DQ5THJ4 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC13.48□□□□□ -0.25
VPS13DQ5THJ4 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
VPS13DQ5THJ4 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC13.48□□□□□ -0.25
VPS13DQ5THJ4 AC091390.4-202ENST00000476426 537 ntBASIC13.48□□□□□ -0.25
VPS13DQ5THJ4 NMU-205ENST00000511469 756 ntTSL 3 BASIC13.48□□□□□ -0.25
VPS13DQ5THJ4 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
VPS13DQ5THJ4 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC13.48□□□□□ -0.25
VPS13DQ5THJ4 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC13.48□□□□□ -0.25
VPS13DQ5THJ4 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
VPS13DQ5THJ4 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC13.48□□□□□ -0.25
VPS13DQ5THJ4 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
VPS13DQ5THJ4 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
VPS13DQ5THJ4 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
VPS13DQ5THJ4 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
VPS13DQ5THJ4 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC13.48□□□□□ -0.25
VPS13DQ5THJ4 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
VPS13DQ5THJ4 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
VPS13DQ5THJ4 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
VPS13DQ5THJ4 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC13.48□□□□□ -0.25
VPS13DQ5THJ4 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
VPS13DQ5THJ4 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC13.48□□□□□ -0.25
VPS13DQ5THJ4 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC13.48□□□□□ -0.25
VPS13DQ5THJ4 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
VPS13DQ5THJ4 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
VPS13DQ5THJ4 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC13.48□□□□□ -0.25
VPS13DQ5THJ4 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
VPS13DQ5THJ4 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
VPS13DQ5THJ4 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
VPS13DQ5THJ4 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
VPS13DQ5THJ4 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC13.47□□□□□ -0.25
VPS13DQ5THJ4 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
VPS13DQ5THJ4 KRT8P20-201ENST00000423953 1409 ntBASIC13.47□□□□□ -0.25
VPS13DQ5THJ4 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
VPS13DQ5THJ4 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
VPS13DQ5THJ4 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC13.47□□□□□ -0.25
VPS13DQ5THJ4 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
VPS13DQ5THJ4 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
VPS13DQ5THJ4 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC13.47□□□□□ -0.25
VPS13DQ5THJ4 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC13.47□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 16.7 ms