Protein–RNA interactions for Protein: Q5TDP6

LGSN, Lengsin, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LGSNQ5TDP6 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
LGSNQ5TDP6 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
LGSNQ5TDP6 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC20.06■□□□□ 0.8
LGSNQ5TDP6 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
LGSNQ5TDP6 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
LGSNQ5TDP6 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC20.06■□□□□ 0.8
LGSNQ5TDP6 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC20.06■□□□□ 0.8
LGSNQ5TDP6 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
LGSNQ5TDP6 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
LGSNQ5TDP6 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
LGSNQ5TDP6 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
LGSNQ5TDP6 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC20.06■□□□□ 0.8
LGSNQ5TDP6 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
LGSNQ5TDP6 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC20.06■□□□□ 0.8
LGSNQ5TDP6 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC20.06■□□□□ 0.8
LGSNQ5TDP6 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
LGSNQ5TDP6 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
LGSNQ5TDP6 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
LGSNQ5TDP6 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
LGSNQ5TDP6 AC093484.2-201ENST00000580996 2166 ntBASIC20.05■□□□□ 0.8
LGSNQ5TDP6 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC20.05■□□□□ 0.8
LGSNQ5TDP6 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
LGSNQ5TDP6 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
LGSNQ5TDP6 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
LGSNQ5TDP6 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
LGSNQ5TDP6 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
LGSNQ5TDP6 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
LGSNQ5TDP6 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC20.05■□□□□ 0.8
LGSNQ5TDP6 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC20.05■□□□□ 0.8
LGSNQ5TDP6 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC20.05■□□□□ 0.8
LGSNQ5TDP6 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
LGSNQ5TDP6 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
LGSNQ5TDP6 AL020996.1-203ENST00000536896 2307 ntBASIC20.05■□□□□ 0.8
LGSNQ5TDP6 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
LGSNQ5TDP6 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
LGSNQ5TDP6 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
LGSNQ5TDP6 MOK-225ENST00000522867 1883 ntTSL 5 BASIC20.05■□□□□ 0.8
LGSNQ5TDP6 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
LGSNQ5TDP6 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
LGSNQ5TDP6 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
LGSNQ5TDP6 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
LGSNQ5TDP6 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC20.04■□□□□ 0.8
LGSNQ5TDP6 AC087633.2-202ENST00000565166 1439 ntBASIC20.04■□□□□ 0.8
LGSNQ5TDP6 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
LGSNQ5TDP6 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
LGSNQ5TDP6 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
LGSNQ5TDP6 AP000974.1-201ENST00000623909 2387 ntBASIC20.04■□□□□ 0.8
LGSNQ5TDP6 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
LGSNQ5TDP6 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
LGSNQ5TDP6 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC20.04■□□□□ 0.8
LGSNQ5TDP6 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC20.04■□□□□ 0.8
LGSNQ5TDP6 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC20.04■□□□□ 0.8
LGSNQ5TDP6 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC20.04■□□□□ 0.8
LGSNQ5TDP6 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
LGSNQ5TDP6 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
LGSNQ5TDP6 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC20.04■□□□□ 0.8
LGSNQ5TDP6 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
LGSNQ5TDP6 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
LGSNQ5TDP6 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
LGSNQ5TDP6 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
LGSNQ5TDP6 AC009237.14-201ENST00000609975 1594 ntBASIC20.04■□□□□ 0.8
LGSNQ5TDP6 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
LGSNQ5TDP6 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
LGSNQ5TDP6 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
LGSNQ5TDP6 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC20.03■□□□□ 0.8
LGSNQ5TDP6 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
LGSNQ5TDP6 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
LGSNQ5TDP6 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
LGSNQ5TDP6 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
LGSNQ5TDP6 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
LGSNQ5TDP6 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC20.03■□□□□ 0.8
LGSNQ5TDP6 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
LGSNQ5TDP6 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC20.03■□□□□ 0.8
LGSNQ5TDP6 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC20.03■□□□□ 0.8
LGSNQ5TDP6 AC005837.3-201ENST00000612163 286 ntBASIC20.03■□□□□ 0.8
LGSNQ5TDP6 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC20.03■□□□□ 0.8
LGSNQ5TDP6 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
LGSNQ5TDP6 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
LGSNQ5TDP6 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
LGSNQ5TDP6 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
LGSNQ5TDP6 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC20.03■□□□□ 0.8
LGSNQ5TDP6 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
LGSNQ5TDP6 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC20.03■□□□□ 0.8
LGSNQ5TDP6 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC20.03■□□□□ 0.8
LGSNQ5TDP6 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
LGSNQ5TDP6 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
LGSNQ5TDP6 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC20.02■□□□□ 0.8
LGSNQ5TDP6 AC090340.1-201ENST00000620778 4980 ntBASIC20.02■□□□□ 0.8
LGSNQ5TDP6 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
LGSNQ5TDP6 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC20.02■□□□□ 0.8
LGSNQ5TDP6 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
LGSNQ5TDP6 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
LGSNQ5TDP6 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
LGSNQ5TDP6 KRT19P1-201ENST00000405746 1186 ntBASIC20.02■□□□□ 0.8
LGSNQ5TDP6 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
LGSNQ5TDP6 VMO1-204ENST00000441199 741 ntTSL 2 BASIC20.02■□□□□ 0.8
LGSNQ5TDP6 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
LGSNQ5TDP6 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC20.02■□□□□ 0.8
LGSNQ5TDP6 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
LGSNQ5TDP6 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC20.02■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms