Protein–RNA interactions for Protein: Q5T4S7

UBR4, E3 ubiquitin-protein ligase UBR4, humanhuman

Predictions only

Length 5,183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4Q5T4S7 DFFB-203ENST00000341385 572 ntTSL 5 BASIC11.02□□□□□ -0.65
UBR4Q5T4S7 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
UBR4Q5T4S7 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
UBR4Q5T4S7 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC11.02□□□□□ -0.65
UBR4Q5T4S7 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC11.02□□□□□ -0.65
UBR4Q5T4S7 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
UBR4Q5T4S7 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC11.02□□□□□ -0.65
UBR4Q5T4S7 AC116562.4-202ENST00000641738 218 ntBASIC11.02□□□□□ -0.65
UBR4Q5T4S7 AC092053.2-201ENST00000640557 1818 ntBASIC11.02□□□□□ -0.65
UBR4Q5T4S7 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC11.02□□□□□ -0.65
UBR4Q5T4S7 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
UBR4Q5T4S7 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC11.02□□□□□ -0.65
UBR4Q5T4S7 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
UBR4Q5T4S7 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
UBR4Q5T4S7 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
UBR4Q5T4S7 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC11.02□□□□□ -0.65
UBR4Q5T4S7 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
UBR4Q5T4S7 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC11.02□□□□□ -0.65
UBR4Q5T4S7 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC11.02□□□□□ -0.65
UBR4Q5T4S7 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC11.01□□□□□ -0.65
UBR4Q5T4S7 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
UBR4Q5T4S7 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
UBR4Q5T4S7 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC11.01□□□□□ -0.65
UBR4Q5T4S7 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC11.01□□□□□ -0.65
UBR4Q5T4S7 GCSHP2-201ENST00000560971 527 ntBASIC11.01□□□□□ -0.65
UBR4Q5T4S7 PIN1-206ENST00000587625 878 ntTSL 2 BASIC11.01□□□□□ -0.65
UBR4Q5T4S7 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
UBR4Q5T4S7 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
UBR4Q5T4S7 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
UBR4Q5T4S7 TLE1-202ENST00000376484 666 ntTSL 3 BASIC11.01□□□□□ -0.65
UBR4Q5T4S7 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC11.01□□□□□ -0.65
UBR4Q5T4S7 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC11.01□□□□□ -0.65
UBR4Q5T4S7 AC005034.1-201ENST00000426657 489 ntBASIC11.01□□□□□ -0.65
UBR4Q5T4S7 AC112907.2-201ENST00000448639 330 ntBASIC11.01□□□□□ -0.65
UBR4Q5T4S7 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC11.01□□□□□ -0.65
UBR4Q5T4S7 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC11.01□□□□□ -0.65
UBR4Q5T4S7 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC11.01□□□□□ -0.65
UBR4Q5T4S7 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
UBR4Q5T4S7 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC11.01□□□□□ -0.65
UBR4Q5T4S7 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
UBR4Q5T4S7 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
UBR4Q5T4S7 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
UBR4Q5T4S7 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
UBR4Q5T4S7 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
UBR4Q5T4S7 KLK8-202ENST00000320838 456 ntTSL 5 BASIC11.01□□□□□ -0.65
UBR4Q5T4S7 HLA-G-202ENST00000376815 851 ntBASIC11.01□□□□□ -0.65
UBR4Q5T4S7 CCR12P-201ENST00000446203 998 ntBASIC11.01□□□□□ -0.65
UBR4Q5T4S7 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
UBR4Q5T4S7 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
UBR4Q5T4S7 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
UBR4Q5T4S7 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC11.01□□□□□ -0.65
UBR4Q5T4S7 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
UBR4Q5T4S7 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC11.01□□□□□ -0.65
UBR4Q5T4S7 AC007322.3-201ENST00000426526 701 ntBASIC11.01□□□□□ -0.65
UBR4Q5T4S7 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC11.01□□□□□ -0.65
UBR4Q5T4S7 AL353719.1-201ENST00000566847 864 ntBASIC11.01□□□□□ -0.65
UBR4Q5T4S7 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC11.01□□□□□ -0.65
UBR4Q5T4S7 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC11□□□□□ -0.65
UBR4Q5T4S7 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
UBR4Q5T4S7 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC11□□□□□ -0.65
UBR4Q5T4S7 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
UBR4Q5T4S7 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
UBR4Q5T4S7 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
UBR4Q5T4S7 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
UBR4Q5T4S7 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC11□□□□□ -0.65
UBR4Q5T4S7 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC11□□□□□ -0.65
UBR4Q5T4S7 AC010653.2-201ENST00000623505 997 ntBASIC11□□□□□ -0.65
UBR4Q5T4S7 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC11□□□□□ -0.65
UBR4Q5T4S7 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC11□□□□□ -0.65
UBR4Q5T4S7 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
UBR4Q5T4S7 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC11□□□□□ -0.65
UBR4Q5T4S7 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
UBR4Q5T4S7 AL121912.1-201ENST00000603683 238 ntBASIC11□□□□□ -0.65
UBR4Q5T4S7 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC11□□□□□ -0.65
UBR4Q5T4S7 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
UBR4Q5T4S7 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
UBR4Q5T4S7 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
UBR4Q5T4S7 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
UBR4Q5T4S7 KSR1P1-201ENST00000446298 240 ntBASIC11□□□□□ -0.65
UBR4Q5T4S7 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
UBR4Q5T4S7 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC11□□□□□ -0.65
UBR4Q5T4S7 RBM7-207ENST00000544582 692 ntTSL 3 BASIC11□□□□□ -0.65
UBR4Q5T4S7 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC11□□□□□ -0.65
UBR4Q5T4S7 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC11□□□□□ -0.65
UBR4Q5T4S7 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC11□□□□□ -0.65
UBR4Q5T4S7 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
UBR4Q5T4S7 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC11□□□□□ -0.65
UBR4Q5T4S7 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC11□□□□□ -0.65
UBR4Q5T4S7 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC11□□□□□ -0.65
UBR4Q5T4S7 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC11□□□□□ -0.65
UBR4Q5T4S7 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
UBR4Q5T4S7 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC11□□□□□ -0.65
UBR4Q5T4S7 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC10.99□□□□□ -0.65
UBR4Q5T4S7 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC10.99□□□□□ -0.65
UBR4Q5T4S7 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC10.99□□□□□ -0.65
UBR4Q5T4S7 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC10.99□□□□□ -0.65
UBR4Q5T4S7 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC10.99□□□□□ -0.65
UBR4Q5T4S7 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC10.99□□□□□ -0.65
UBR4Q5T4S7 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
UBR4Q5T4S7 AC243591.1-201ENST00000452967 1364 ntBASIC10.99□□□□□ -0.65
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms