Protein–RNA interactions for Protein: Q5M7Z0

RNFT1, E3 ubiquitin-protein ligase RNFT1, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1Q5M7Z0 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC18.01■□□□□ 0.47
RNFT1Q5M7Z0 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC18.01■□□□□ 0.47
RNFT1Q5M7Z0 AP003071.4-201ENST00000562276 1284 ntBASIC18.01■□□□□ 0.47
RNFT1Q5M7Z0 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC18.01■□□□□ 0.47
RNFT1Q5M7Z0 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC18.01■□□□□ 0.47
RNFT1Q5M7Z0 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC18.01■□□□□ 0.47
RNFT1Q5M7Z0 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC18.01■□□□□ 0.47
RNFT1Q5M7Z0 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
RNFT1Q5M7Z0 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
RNFT1Q5M7Z0 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RNFT1Q5M7Z0 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RNFT1Q5M7Z0 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RNFT1Q5M7Z0 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC18.01■□□□□ 0.47
RNFT1Q5M7Z0 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RNFT1Q5M7Z0 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC18.01■□□□□ 0.47
RNFT1Q5M7Z0 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC18■□□□□ 0.47
RNFT1Q5M7Z0 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RNFT1Q5M7Z0 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC18■□□□□ 0.47
RNFT1Q5M7Z0 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
RNFT1Q5M7Z0 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC18■□□□□ 0.47
RNFT1Q5M7Z0 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RNFT1Q5M7Z0 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC18■□□□□ 0.47
RNFT1Q5M7Z0 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC18■□□□□ 0.47
RNFT1Q5M7Z0 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RNFT1Q5M7Z0 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC18■□□□□ 0.47
RNFT1Q5M7Z0 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC18■□□□□ 0.47
RNFT1Q5M7Z0 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC18■□□□□ 0.47
RNFT1Q5M7Z0 AC087499.1-201ENST00000418141 1075 ntBASIC18■□□□□ 0.47
RNFT1Q5M7Z0 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC18■□□□□ 0.47
RNFT1Q5M7Z0 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC18■□□□□ 0.47
RNFT1Q5M7Z0 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC18■□□□□ 0.47
RNFT1Q5M7Z0 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC18■□□□□ 0.47
RNFT1Q5M7Z0 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC18■□□□□ 0.47
RNFT1Q5M7Z0 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC18■□□□□ 0.47
RNFT1Q5M7Z0 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC18■□□□□ 0.47
RNFT1Q5M7Z0 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC18■□□□□ 0.47
RNFT1Q5M7Z0 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
RNFT1Q5M7Z0 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RNFT1Q5M7Z0 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
RNFT1Q5M7Z0 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC18■□□□□ 0.47
RNFT1Q5M7Z0 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
RNFT1Q5M7Z0 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
RNFT1Q5M7Z0 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
RNFT1Q5M7Z0 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC17.99■□□□□ 0.47
RNFT1Q5M7Z0 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC17.99■□□□□ 0.47
RNFT1Q5M7Z0 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
RNFT1Q5M7Z0 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RNFT1Q5M7Z0 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.99■□□□□ 0.47
RNFT1Q5M7Z0 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
RNFT1Q5M7Z0 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
RNFT1Q5M7Z0 CALM3-202ENST00000391918 702 ntTSL 2 BASIC17.99■□□□□ 0.47
RNFT1Q5M7Z0 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC17.99■□□□□ 0.47
RNFT1Q5M7Z0 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC17.99■□□□□ 0.47
RNFT1Q5M7Z0 LINC01023-201ENST00000606054 436 ntBASIC17.99■□□□□ 0.47
RNFT1Q5M7Z0 AC004264.1-201ENST00000608354 794 ntBASIC17.99■□□□□ 0.47
RNFT1Q5M7Z0 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
RNFT1Q5M7Z0 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RNFT1Q5M7Z0 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC17.99■□□□□ 0.47
RNFT1Q5M7Z0 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RNFT1Q5M7Z0 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RNFT1Q5M7Z0 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC17.99■□□□□ 0.47
RNFT1Q5M7Z0 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
RNFT1Q5M7Z0 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RNFT1Q5M7Z0 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC17.98■□□□□ 0.47
RNFT1Q5M7Z0 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC17.98■□□□□ 0.47
RNFT1Q5M7Z0 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RNFT1Q5M7Z0 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RNFT1Q5M7Z0 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RNFT1Q5M7Z0 AL353807.1-201ENST00000427475 662 ntBASIC17.98■□□□□ 0.47
RNFT1Q5M7Z0 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC17.98■□□□□ 0.47
RNFT1Q5M7Z0 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC17.98■□□□□ 0.47
RNFT1Q5M7Z0 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC17.98■□□□□ 0.47
RNFT1Q5M7Z0 AC073195.1-201ENST00000607241 877 ntBASIC17.98■□□□□ 0.47
RNFT1Q5M7Z0 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
RNFT1Q5M7Z0 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RNFT1Q5M7Z0 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
RNFT1Q5M7Z0 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
RNFT1Q5M7Z0 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
RNFT1Q5M7Z0 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RNFT1Q5M7Z0 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RNFT1Q5M7Z0 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC17.98■□□□□ 0.47
RNFT1Q5M7Z0 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RNFT1Q5M7Z0 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RNFT1Q5M7Z0 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
RNFT1Q5M7Z0 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC17.97■□□□□ 0.47
RNFT1Q5M7Z0 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC17.97■□□□□ 0.47
RNFT1Q5M7Z0 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RNFT1Q5M7Z0 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RNFT1Q5M7Z0 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
RNFT1Q5M7Z0 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
RNFT1Q5M7Z0 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
RNFT1Q5M7Z0 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
RNFT1Q5M7Z0 AL355355.2-201ENST00000442321 338 ntBASIC17.97■□□□□ 0.47
RNFT1Q5M7Z0 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
RNFT1Q5M7Z0 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RNFT1Q5M7Z0 AL353708.3-201ENST00000610272 989 ntBASIC17.97■□□□□ 0.47
RNFT1Q5M7Z0 AC133561.5-201ENST00000635547 218 ntBASIC17.97■□□□□ 0.47
RNFT1Q5M7Z0 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC17.97■□□□□ 0.47
RNFT1Q5M7Z0 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RNFT1Q5M7Z0 SRI-203ENST00000419179 1307 ntTSL 2 BASIC17.97■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms