Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
PDS5AQ29RF7 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
PDS5AQ29RF7 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
PDS5AQ29RF7 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC24.01■■□□□ 1.43
PDS5AQ29RF7 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
PDS5AQ29RF7 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC24.01■■□□□ 1.43
PDS5AQ29RF7 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC24.01■■□□□ 1.43
PDS5AQ29RF7 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC24.01■■□□□ 1.43
PDS5AQ29RF7 AC073195.1-201ENST00000607241 877 ntBASIC24.01■■□□□ 1.43
PDS5AQ29RF7 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
PDS5AQ29RF7 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC24.01■■□□□ 1.43
PDS5AQ29RF7 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC24.01■■□□□ 1.43
PDS5AQ29RF7 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
PDS5AQ29RF7 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC24■■□□□ 1.43
PDS5AQ29RF7 STK25-204ENST00000405585 1643 ntTSL 2 BASIC24■■□□□ 1.43
PDS5AQ29RF7 PHGDH-210ENST00000641115 1638 ntBASIC24■■□□□ 1.43
PDS5AQ29RF7 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC24■■□□□ 1.43
PDS5AQ29RF7 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC24■■□□□ 1.43
PDS5AQ29RF7 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
PDS5AQ29RF7 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC24■■□□□ 1.43
PDS5AQ29RF7 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC24■■□□□ 1.43
PDS5AQ29RF7 YBX1P10-201ENST00000444752 975 ntBASIC24■■□□□ 1.43
PDS5AQ29RF7 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
PDS5AQ29RF7 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC24■■□□□ 1.43
PDS5AQ29RF7 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC24■■□□□ 1.43
PDS5AQ29RF7 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC24■■□□□ 1.43
PDS5AQ29RF7 SNX21-213ENST00000614929 587 ntTSL 5 BASIC24■■□□□ 1.43
PDS5AQ29RF7 AC073912.3-201ENST00000624414 853 ntBASIC24■■□□□ 1.43
PDS5AQ29RF7 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC24■■□□□ 1.43
PDS5AQ29RF7 AC018553.1-201ENST00000616682 1458 ntBASIC24■■□□□ 1.43
PDS5AQ29RF7 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC24■■□□□ 1.43
PDS5AQ29RF7 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
PDS5AQ29RF7 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
PDS5AQ29RF7 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC23.99■■□□□ 1.43
PDS5AQ29RF7 BX119927.1-201ENST00000636596 1552 ntBASIC23.99■■□□□ 1.43
PDS5AQ29RF7 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC23.99■■□□□ 1.43
PDS5AQ29RF7 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC23.99■■□□□ 1.43
PDS5AQ29RF7 AP006587.1-201ENST00000534129 1502 ntBASIC23.99■■□□□ 1.43
PDS5AQ29RF7 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC23.99■■□□□ 1.43
PDS5AQ29RF7 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC23.99■■□□□ 1.43
PDS5AQ29RF7 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC23.99■■□□□ 1.43
PDS5AQ29RF7 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC23.99■■□□□ 1.43
PDS5AQ29RF7 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC23.99■■□□□ 1.43
PDS5AQ29RF7 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC23.99■■□□□ 1.43
PDS5AQ29RF7 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC23.99■■□□□ 1.43
PDS5AQ29RF7 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC23.99■■□□□ 1.43
PDS5AQ29RF7 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC23.99■■□□□ 1.43
PDS5AQ29RF7 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC23.99■■□□□ 1.43
PDS5AQ29RF7 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC23.99■■□□□ 1.43
PDS5AQ29RF7 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC23.98■■□□□ 1.43
PDS5AQ29RF7 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC23.98■■□□□ 1.43
PDS5AQ29RF7 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
PDS5AQ29RF7 SRI-203ENST00000419179 1307 ntTSL 2 BASIC23.98■■□□□ 1.43
PDS5AQ29RF7 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
PDS5AQ29RF7 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
PDS5AQ29RF7 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
PDS5AQ29RF7 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
PDS5AQ29RF7 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
PDS5AQ29RF7 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
PDS5AQ29RF7 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
PDS5AQ29RF7 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC23.98■■□□□ 1.43
PDS5AQ29RF7 C1QL1P1-201ENST00000568105 661 ntBASIC23.98■■□□□ 1.43
PDS5AQ29RF7 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC23.98■■□□□ 1.43
PDS5AQ29RF7 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
PDS5AQ29RF7 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC23.98■■□□□ 1.43
PDS5AQ29RF7 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
PDS5AQ29RF7 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC23.98■■□□□ 1.43
PDS5AQ29RF7 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC23.98■■□□□ 1.43
PDS5AQ29RF7 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC23.97■■□□□ 1.43
PDS5AQ29RF7 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC23.97■■□□□ 1.43
PDS5AQ29RF7 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC23.97■■□□□ 1.43
PDS5AQ29RF7 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
PDS5AQ29RF7 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC23.97■■□□□ 1.43
PDS5AQ29RF7 NIFKP9-201ENST00000419265 221 ntBASIC23.97■■□□□ 1.43
PDS5AQ29RF7 GXYLT1P3-201ENST00000453058 1193 ntBASIC23.97■■□□□ 1.43
PDS5AQ29RF7 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC23.97■■□□□ 1.43
PDS5AQ29RF7 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC23.97■■□□□ 1.43
PDS5AQ29RF7 CD177P1-201ENST00000606252 935 ntBASIC23.97■■□□□ 1.43
PDS5AQ29RF7 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC23.97■■□□□ 1.43
PDS5AQ29RF7 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC23.97■■□□□ 1.43
PDS5AQ29RF7 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
PDS5AQ29RF7 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC23.97■■□□□ 1.43
PDS5AQ29RF7 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC23.97■■□□□ 1.43
PDS5AQ29RF7 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC23.97■■□□□ 1.43
PDS5AQ29RF7 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC23.97■■□□□ 1.43
PDS5AQ29RF7 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
PDS5AQ29RF7 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
PDS5AQ29RF7 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC23.96■■□□□ 1.43
PDS5AQ29RF7 AC020907.5-201ENST00000624372 1936 ntBASIC23.96■■□□□ 1.43
PDS5AQ29RF7 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC23.96■■□□□ 1.43
PDS5AQ29RF7 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
PDS5AQ29RF7 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
PDS5AQ29RF7 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
PDS5AQ29RF7 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC23.96■■□□□ 1.43
PDS5AQ29RF7 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC23.96■■□□□ 1.43
PDS5AQ29RF7 KRT18P16-201ENST00000510337 1294 ntBASIC23.96■■□□□ 1.43
PDS5AQ29RF7 BX088651.1-201ENST00000540551 451 ntBASIC23.96■■□□□ 1.43
PDS5AQ29RF7 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC23.96■■□□□ 1.43
PDS5AQ29RF7 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC23.96■■□□□ 1.43
PDS5AQ29RF7 AC026471.5-201ENST00000615068 467 ntBASIC23.96■■□□□ 1.43
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms