Protein–RNA interactions for Protein: Q12697

YPK9, Vacuolar cation-transporting ATPase YPK9, yeastyeast

Predictions only

Length 1,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
YPK9Q12697 tM(CAU)Q2tM(CAU)Q2 78 nt-1.93□□□□□ -2.72
YPK9Q12697 snR39BsnR39B 96 nt-1.94□□□□□ -2.72
YPK9Q12697 snR78snR78 87 nt-1.96□□□□□ -2.72
YPK9Q12697 YDR183C-AYDR183C-A 258 nt-1.96□□□□□ -2.72
YPK9Q12697 YGR035CYGR035C 351 nt-1.97□□□□□ -2.72
YPK9Q12697 YEL014CYEL014C 306 nt-1.98□□□□□ -2.73
YPK9Q12697 YAL063C-AYAL063C-A 291 nt-1.98□□□□□ -2.73
YPK9Q12697 YAL068W-AYAL068W-A 255 nt-2□□□□□ -2.73
YPK9Q12697 YDL159C-BYDL159C-B 177 nt-2.01□□□□□ -2.73
YPK9Q12697 YOL166W-AYOL166W-A 156 nt-2.01□□□□□ -2.73
YPK9Q12697 YOR293C-AYOR293C-A 150 nt-2.02□□□□□ -2.73
YPK9Q12697 YDR543CYDR543C 300 nt-2.04□□□□□ -2.74
YPK9Q12697 YBR182C-AYBR182C-A 195 nt-2.04□□□□□ -2.74
YPK9Q12697 YOR329W-AYOR329W-A 210 nt-2.05□□□□□ -2.74
YPK9Q12697 YJR157WYJR157W 363 nt-2.06□□□□□ -2.74
YPK9Q12697 YAL016C-BYAL016C-B 186 nt-2.07□□□□□ -2.74
YPK9Q12697 tF(GAA)QtF(GAA)Q 75 nt-2.07□□□□□ -2.74
YPK9Q12697 YBR178WYBR178W 375 nt-2.07□□□□□ -2.74
YPK9Q12697 YMR315W-AYMR315W-A 108 nt-2.08□□□□□ -2.74
YPK9Q12697 YBR131C-AYBR131C-A 90 nt-2.14□□□□□ -2.75
YPK9Q12697 YOR376W-AYOR376W-A 156 nt-2.15□□□□□ -2.75
YPK9Q12697 YDR413CYDR413C 576 nt-2.17□□□□□ -2.76
YPK9Q12697 YER181CYER181C 324 nt-2.17□□□□□ -2.76
YPK9Q12697 YPR197CYPR197C 564 nt-2.2□□□□□ -2.76
YPK9Q12697 YLR222C-AYLR222C-A 231 nt-2.21□□□□□ -2.76
YPK9Q12697 YEL050W-AYEL050W-A 192 nt-2.26□□□□□ -2.77
YPK9Q12697 YLR299C-AYLR299C-A 93 nt-2.26□□□□□ -2.77
YPK9Q12697 YBR196C-AYBR196C-A 150 nt-2.26□□□□□ -2.77
YPK9Q12697 YNL097C-BYNL097C-B 123 nt-2.27□□□□□ -2.77
YPK9Q12697 YPL038W-AYPL038W-A 192 nt-2.27□□□□□ -2.77
YPK9Q12697 Q0142Q0142 177 nt-2.28□□□□□ -2.77
YPK9Q12697 YOR309CYOR309C 381 nt-2.29□□□□□ -2.78
YPK9Q12697 snR48snR48 113 nt-2.3□□□□□ -2.78
YPK9Q12697 YLR342W-AYLR342W-A 174 nt-2.35□□□□□ -2.79
YPK9Q12697 YOR316C-AYOR316C-A 210 nt-2.35□□□□□ -2.79
YPK9Q12697 YOR102WYOR102W 351 nt-2.37□□□□□ -2.79
YPK9Q12697 YKL118WYKL118W 312 nt-2.39□□□□□ -2.79
YPK9Q12697 YHR180C-BYHR180C-B 105 nt-2.41□□□□□ -2.8
YPK9Q12697 RPL39YJL189W 156 nt-2.41□□□□□ -2.8
YPK9Q12697 snR55snR55 98 nt-2.42□□□□□ -2.8
YPK9Q12697 tL(UAA)QtL(UAA)Q 85 nt-2.42□□□□□ -2.8
YPK9Q12697 YNL277W-AYNL277W-A 189 nt-2.42□□□□□ -2.8
YPK9Q12697 YGL188C-AYGL188C-A 141 nt-2.44□□□□□ -2.8
YPK9Q12697 YPR012WYPR012W 255 nt-2.49□□□□□ -2.81
YPK9Q12697 YOR302WYOR302W 78 nt-2.52□□□□□ -2.81
YPK9Q12697 YDL240C-AYDL240C-A 138 nt-2.56□□□□□ -2.82
YPK9Q12697 YDR157WYDR157W 402 nt-2.57□□□□□ -2.82
YPK9Q12697 YKL106C-AYKL106C-A 120 nt-2.58□□□□□ -2.82
YPK9Q12697 YOL155W-AYOL155W-A 135 nt-2.64□□□□□ -2.83
YPK9Q12697 YOL083C-AYOL083C-A 141 nt-2.65□□□□□ -2.83
YPK9Q12697 YDR118W-AYDR118W-A 117 nt-2.66□□□□□ -2.84
YPK9Q12697 snR6snR6 112 nt-2.67□□□□□ -2.84
YPK9Q12697 YJL150WYJL150W 303 nt-2.68□□□□□ -2.84
YPK9Q12697 YNL198CYNL198C 303 nt-2.68□□□□□ -2.84
YPK9Q12697 YBR109W-AYBR109W-A 225 nt-2.69□□□□□ -2.84
YPK9Q12697 YDR524W-CYDR524W-C 90 nt-2.71□□□□□ -2.84
YPK9Q12697 snR52snR52 92 nt-2.71□□□□□ -2.84
YPK9Q12697 GIM4YEL003W 336 nt-2.73□□□□□ -2.85
YPK9Q12697 snR56snR56 88 nt-2.75□□□□□ -2.85
YPK9Q12697 Q0017Q0017 162 nt-2.77□□□□□ -2.85
YPK9Q12697 YHL015W-AYHL015W-A 84 nt-2.8□□□□□ -2.86
YPK9Q12697 snR38snR38 95 nt-2.82□□□□□ -2.86
YPK9Q12697 YBR296C-AYBR296C-A 120 nt-2.84□□□□□ -2.86
YPK9Q12697 RPL41AYDL184C 78 nt-2.85□□□□□ -2.87
YPK9Q12697 YPL152W-AYPL152W-A 99 nt-2.85□□□□□ -2.87
YPK9Q12697 snR73snR73 106 nt-2.93□□□□□ -2.88
YPK9Q12697 snR80snR80 171 nt-2.95□□□□□ -2.88
YPK9Q12697 SOM1YEL059C-A 225 nt-2.95□□□□□ -2.88
YPK9Q12697 snR65snR65 100 nt-2.96□□□□□ -2.88
YPK9Q12697 YOR335W-AYOR335W-A 81 nt-2.96□□□□□ -2.88
YPK9Q12697 YCR095W-AYCR095W-A 159 nt-3.01□□□□□ -2.89
YPK9Q12697 YJR162CYJR162C 351 nt-3.03□□□□□ -2.9
YPK9Q12697 YNL337WYNL337W 255 nt-3.03□□□□□ -2.9
YPK9Q12697 VAR1Q0140 1197 nt-3.04□□□□□ -2.9
YPK9Q12697 YBL071C-BYBL071C-B 99 nt-3.09□□□□□ -2.9
YPK9Q12697 RPL41BYDL133C-A 78 nt-3.11□□□□□ -2.91
YPK9Q12697 YBL053WYBL053W 375 nt-3.11□□□□□ -2.91
YPK9Q12697 YOL164W-AYOL164W-A 183 nt-3.12□□□□□ -2.91
YPK9Q12697 YGR151CYGR151C 336 nt-3.16□□□□□ -2.92
YPK9Q12697 YDR406W-AYDR406W-A 246 nt-3.22□□□□□ -2.92
YPK9Q12697 tV(UAC)QtV(UAC)Q 76 nt-3.22□□□□□ -2.93
YPK9Q12697 snR47snR47 99 nt-3.27□□□□□ -2.93
YPK9Q12697 YDR524C-AYDR524C-A 120 nt-3.3□□□□□ -2.94
YPK9Q12697 YOR231C-AYOR231C-A 201 nt-3.34□□□□□ -2.94
YPK9Q12697 YAL037C-AYAL037C-A 93 nt-3.36□□□□□ -2.95
YPK9Q12697 YDL114W-AYDL114W-A 114 nt-3.38□□□□□ -2.95
YPK9Q12697 snR85snR85 171 nt-3.41□□□□□ -2.95
YPK9Q12697 YKL225WYKL225W 348 nt-3.46□□□□□ -2.96
YPK9Q12697 YBL100W-CYBL100W-C 120 nt-3.54□□□□□ -2.98
YPK9Q12697 tS(GCU)Q1tS(GCU)Q1 86 nt-3.55□□□□□ -2.98
YPK9Q12697 snR87snR87 109 nt-3.6□□□□□ -2.99
YPK9Q12697 SPG3YDR504C 384 nt-3.61□□□□□ -2.99
YPK9Q12697 YHR175W-AYHR175W-A 150 nt-3.63□□□□□ -2.99
YPK9Q12697 YCL001W-BYCL001W-B 255 nt-3.67□□□□□ -3
YPK9Q12697 tR(ACG)Q2tR(ACG)Q2 74 nt-3.73□□□□□ -3.01
YPK9Q12697 YMR046W-AYMR046W-A 129 nt-3.78□□□□□ -3.01
YPK9Q12697 YDL159W-AYDL159W-A 132 nt-3.79□□□□□ -3.02
YPK9Q12697 YKL096C-BYKL096C-B 150 nt-3.87□□□□□ -3.03
YPK9Q12697 YGR122C-AYGR122C-A 129 nt-3.89□□□□□ -3.03
YPK9Q12697 Q0144Q0144 330 nt-3.92□□□□□ -3.04
Retrieved 100 of 7,029 protein–RNA pairs in 14.7 ms