Protein–RNA interactions for Protein: Q08949

DDC1, DNA damage checkpoint protein 1, yeastyeast

Predictions only

Length 612 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
DDC1Q08949 YOL013W-AYOL013W-A 192 nt0.2□□□□□ -2.38
DDC1Q08949 snR39BsnR39B 96 nt0.2□□□□□ -2.38
DDC1Q08949 snR48snR48 113 nt0.2□□□□□ -2.38
DDC1Q08949 tL(UAA)QtL(UAA)Q 85 nt0.18□□□□□ -2.38
DDC1Q08949 tM(CAU)Q2tM(CAU)Q2 78 nt0.18□□□□□ -2.38
DDC1Q08949 YBR099CYBR099C 384 nt0.18□□□□□ -2.38
DDC1Q08949 YOR186C-AYOR186C-A 210 nt0.17□□□□□ -2.38
DDC1Q08949 YNL198CYNL198C 303 nt0.16□□□□□ -2.38
DDC1Q08949 YBL053WYBL053W 375 nt0.15□□□□□ -2.39
DDC1Q08949 YPL060C-AYPL060C-A 3315 nt0.14□□□□□ -2.39
DDC1Q08949 YHL015W-AYHL015W-A 84 nt0.14□□□□□ -2.39
DDC1Q08949 YLR466C-BYLR466C-B 117 nt0.14□□□□□ -2.39
DDC1Q08949 YOR102WYOR102W 351 nt0.14□□□□□ -2.39
DDC1Q08949 RPM2YML091C 3609 nt0.14□□□□□ -2.39
DDC1Q08949 SOV1YMR066W 2697 nt0.13□□□□□ -2.39
DDC1Q08949 YDL007C-AYDL007C-A 258 nt0.12□□□□□ -2.39
DDC1Q08949 EST1YLR233C 2100 nt0.12□□□□□ -2.39
DDC1Q08949 YGR146C-AYGR146C-A 162 nt0.1□□□□□ -2.39
DDC1Q08949 YGR151CYGR151C 336 nt0.08□□□□□ -2.4
DDC1Q08949 YNL067W-BYNL067W-B 141 nt0.08□□□□□ -2.4
DDC1Q08949 YNL337WYNL337W 255 nt0.06□□□□□ -2.4
DDC1Q08949 YNL338WYNL338W 159 nt0.04□□□□□ -2.4
DDC1Q08949 snR45snR45 172 nt0.03□□□□□ -2.4
DDC1Q08949 snR69snR69 101 nt0.02□□□□□ -2.41
DDC1Q08949 PMP2YEL017C-A 132 nt0.01□□□□□ -2.41
DDC1Q08949 YGR164WYGR164W 336 nt0□□□□□ -2.41
DDC1Q08949 YJL077W-AYJL077W-A 87 nt-0.01□□□□□ -2.41
DDC1Q08949 snR128snR128 126 nt-0.01□□□□□ -2.41
DDC1Q08949 YNL205CYNL205C 423 nt-0.02□□□□□ -2.41
DDC1Q08949 tQ(UUG)QtQ(UUG)Q 76 nt-0.03□□□□□ -2.41
DDC1Q08949 YGL007C-AYGL007C-A 87 nt-0.04□□□□□ -2.42
DDC1Q08949 Q0032Q0032 291 nt-0.06□□□□□ -2.42
DDC1Q08949 SEC10YLR166C 2616 nt-0.07□□□□□ -2.42
DDC1Q08949 RDS3YPR094W 324 nt-0.07□□□□□ -2.42
DDC1Q08949 tD(GUC)QtD(GUC)Q 75 nt-0.09□□□□□ -2.42
DDC1Q08949 YBR178WYBR178W 375 nt-0.1□□□□□ -2.43
DDC1Q08949 SOM1YEL059C-A 225 nt-0.12□□□□□ -2.43
DDC1Q08949 YIL071W-AYIL071W-A 477 nt-0.13□□□□□ -2.43
DDC1Q08949 YOR225WYOR225W 330 nt-0.13□□□□□ -2.43
DDC1Q08949 snR50snR50 90 nt-0.13□□□□□ -2.43
DDC1Q08949 YER090C-AYER090C-A 90 nt-0.14□□□□□ -2.43
DDC1Q08949 YNL266WYNL266W 420 nt-0.14□□□□□ -2.43
DDC1Q08949 YML100W-AYML100W-A 174 nt-0.15□□□□□ -2.43
DDC1Q08949 YCR095W-AYCR095W-A 159 nt-0.16□□□□□ -2.44
DDC1Q08949 YLR286W-AYLR286W-A 135 nt-0.16□□□□□ -2.44
DDC1Q08949 TFB5YDR079C-A 219 nt-0.18□□□□□ -2.44
DDC1Q08949 YDL159C-BYDL159C-B 177 nt-0.19□□□□□ -2.44
DDC1Q08949 YBR196C-AYBR196C-A 150 nt-0.2□□□□□ -2.44
DDC1Q08949 YCL001W-BYCL001W-B 255 nt-0.2□□□□□ -2.44
DDC1Q08949 YLR294CYLR294C 330 nt-0.21□□□□□ -2.44
DDC1Q08949 SBH2YER019C-A 267 nt-0.23□□□□□ -2.45
DDC1Q08949 YLR299C-AYLR299C-A 93 nt-0.27□□□□□ -2.45
DDC1Q08949 PAU9YBL108C-A 129 nt-0.3□□□□□ -2.46
DDC1Q08949 snR67snR67 82 nt-0.31□□□□□ -2.46
DDC1Q08949 tA(UGC)QtA(UGC)Q 76 nt-0.33□□□□□ -2.46
DDC1Q08949 YJL113WYJL113W 4647 nt-0.38□□□□□ -2.47
DDC1Q08949 YML054C-AYML054C-A 159 nt-0.39□□□□□ -2.47
DDC1Q08949 SKI7YOR076C 2244 nt-0.4□□□□□ -2.47
DDC1Q08949 YNL170WYNL170W 396 nt-0.44□□□□□ -2.48
DDC1Q08949 YOL083C-AYOL083C-A 141 nt-0.45□□□□□ -2.48
DDC1Q08949 YHR180C-BYHR180C-B 105 nt-0.46□□□□□ -2.48
DDC1Q08949 YBL071C-BYBL071C-B 99 nt-0.47□□□□□ -2.48
DDC1Q08949 URB1YKL014C 5295 nt-0.49□□□□□ -2.49
DDC1Q08949 ATP8Q0080 147 nt-0.51□□□□□ -2.49
DDC1Q08949 YAL037C-AYAL037C-A 93 nt-0.51□□□□□ -2.49
DDC1Q08949 snR81snR81 201 nt-0.52□□□□□ -2.49
DDC1Q08949 YNL103W-AYNL103W-A 90 nt-0.55□□□□□ -2.5
DDC1Q08949 YOL164W-AYOL164W-A 183 nt-0.55□□□□□ -2.5
DDC1Q08949 YBR109W-AYBR109W-A 225 nt-0.59□□□□□ -2.5
DDC1Q08949 snR161snR161 161 nt-0.61□□□□□ -2.51
DDC1Q08949 snR61snR61 90 nt-0.64□□□□□ -2.51
DDC1Q08949 RPL41AYDL184C 78 nt-0.64□□□□□ -2.51
DDC1Q08949 YGL041C-BYGL041C-B 183 nt-0.64□□□□□ -2.51
DDC1Q08949 snR33snR33 183 nt-0.64□□□□□ -2.51
DDC1Q08949 snR47snR47 99 nt-0.64□□□□□ -2.51
DDC1Q08949 YBR296C-AYBR296C-A 120 nt-0.65□□□□□ -2.51
DDC1Q08949 Q0092Q0092 141 nt-0.66□□□□□ -2.52
DDC1Q08949 YGR240C-AYGR240C-A 201 nt-0.67□□□□□ -2.52
DDC1Q08949 tT(UGU)G1tT(UGU)G1 72 nt-0.67□□□□□ -2.52
DDC1Q08949 tT(UGU)G2tT(UGU)G2 72 nt-0.67□□□□□ -2.52
DDC1Q08949 tT(UGU)PtT(UGU)P 72 nt-0.67□□□□□ -2.52
DDC1Q08949 snR38snR38 95 nt-0.67□□□□□ -2.52
DDC1Q08949 YBL100W-CYBL100W-C 120 nt-0.69□□□□□ -2.52
DDC1Q08949 YOR376W-AYOR376W-A 156 nt-0.7□□□□□ -2.52
DDC1Q08949 YHL009W-BYHL009W-B 5409 nt-0.71□□□□□ -2.52
DDC1Q08949 tS(GCU)Q1tS(GCU)Q1 86 nt-0.76□□□□□ -2.53
DDC1Q08949 YKL106C-AYKL106C-A 120 nt-0.76□□□□□ -2.53
DDC1Q08949 Q0143Q0143 153 nt-0.8□□□□□ -2.54
DDC1Q08949 YKL225WYKL225W 348 nt-0.86□□□□□ -2.55
DDC1Q08949 YOR316C-AYOR316C-A 210 nt-0.86□□□□□ -2.55
DDC1Q08949 YDR034C-AYDR034C-A 177 nt-0.87□□□□□ -2.55
DDC1Q08949 snR62snR62 100 nt-0.88□□□□□ -2.55
DDC1Q08949 snR77snR77 88 nt-0.88□□□□□ -2.55
DDC1Q08949 tP(UGG)QtP(UGG)Q 72 nt-0.9□□□□□ -2.55
DDC1Q08949 CDC65tQ(CUG)M 72 nt-0.94□□□□□ -2.56
DDC1Q08949 YNR077CYNR077C 255 nt-0.95□□□□□ -2.56
DDC1Q08949 YBR223W-AYBR223W-A 120 nt-0.97□□□□□ -2.56
DDC1Q08949 YMR326CYMR326C 309 nt-0.99□□□□□ -2.57
DDC1Q08949 YHR217CYHR217C 462 nt-1.02□□□□□ -2.57
DDC1Q08949 snR85snR85 171 nt-1.03□□□□□ -2.57
Retrieved 100 of 7,029 protein–RNA pairs in 45.1 ms