Protein–RNA interactions for Protein: Q08416

IRC23, Increased recombination centers protein 23, yeast

Predictions only

Length 157 aa.

Protein		RNA				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	UniProt Accession	Gene	Ensembl Transcript ID	Length	Transcript Status	Prediction Score	Prediction z-Score	Detected Interaction
IRC23	Q08416	tM(CAU)Q2	tM(CAU)Q2	78 nt		-0.94	□□□□□ -2.56
IRC23	Q08416	YKL118W	YKL118W	312 nt		-0.94	□□□□□ -2.56
IRC23	Q08416	YEL014C	YEL014C	306 nt		-0.95	□□□□□ -2.56
IRC23	Q08416	YER181C	YER181C	324 nt		-0.97	□□□□□ -2.56
IRC23	Q08416	YPR012W	YPR012W	255 nt		-0.97	□□□□□ -2.56
IRC23	Q08416	YNL277W-A	YNL277W-A	189 nt		-0.98	□□□□□ -2.57
IRC23	Q08416	RDS3	YPR094W	324 nt		-0.98	□□□□□ -2.57
IRC23	Q08416	YGR146C-A	YGR146C-A	162 nt		-0.99	□□□□□ -2.57
IRC23	Q08416	YNL266W	YNL266W	420 nt		-0.99	□□□□□ -2.57
IRC23	Q08416	YNR077C	YNR077C	255 nt		-0.99	□□□□□ -2.57
IRC23	Q08416	YBR131C-A	YBR131C-A	90 nt		-0.99	□□□□□ -2.57
IRC23	Q08416	snR50	snR50	90 nt		-1	□□□□□ -2.57
IRC23	Q08416	PMP2	YEL017C-A	132 nt		-1.01	□□□□□ -2.57
IRC23	Q08416	snR39B	snR39B	96 nt		-1.01	□□□□□ -2.57
IRC23	Q08416	tP(UGG)Q	tP(UGG)Q	72 nt		-1.02	□□□□□ -2.57
IRC23	Q08416	GIM4	YEL003W	336 nt		-1.03	□□□□□ -2.57
IRC23	Q08416	YFL019C	YFL019C	354 nt		-1.03	□□□□□ -2.57
IRC23	Q08416	snR55	snR55	98 nt		-1.05	□□□□□ -2.58
IRC23	Q08416	JLP2	YMR132C	627 nt		-1.07	□□□□□ -2.58
IRC23	Q08416	YOR329W-A	YOR329W-A	210 nt		-1.1	□□□□□ -2.59
IRC23	Q08416	Q0144	Q0144	330 nt		-1.11	□□□□□ -2.59
IRC23	Q08416	YNL097C-B	YNL097C-B	123 nt		-1.13	□□□□□ -2.59
IRC23	Q08416	snR67	snR67	82 nt		-1.14	□□□□□ -2.59
IRC23	Q08416	tD(GUC)Q	tD(GUC)Q	75 nt		-1.14	□□□□□ -2.59
IRC23	Q08416	SKI7	YOR076C	2244 nt		-1.14	□□□□□ -2.59
IRC23	Q08416	YLR286W-A	YLR286W-A	135 nt		-1.18	□□□□□ -2.6
IRC23	Q08416	YOL155W-A	YOL155W-A	135 nt		-1.19	□□□□□ -2.6
IRC23	Q08416	YNL205C	YNL205C	423 nt		-1.22	□□□□□ -2.6
IRC23	Q08416	YBR178W	YBR178W	375 nt		-1.23	□□□□□ -2.61
IRC23	Q08416	YDL159C-B	YDL159C-B	177 nt		-1.25	□□□□□ -2.61
IRC23	Q08416	YOR302W	YOR302W	78 nt		-1.25	□□□□□ -2.61
IRC23	Q08416	snR65	snR65	100 nt		-1.26	□□□□□ -2.61
IRC23	Q08416	snR48	snR48	113 nt		-1.26	□□□□□ -2.61
IRC23	Q08416	YPL152W-A	YPL152W-A	99 nt		-1.27	□□□□□ -2.61
IRC23	Q08416	CDC65	tQ(CUG)M	72 nt		-1.32	□□□□□ -2.62
IRC23	Q08416	tY(GUA)Q	tY(GUA)Q	84 nt		-1.32	□□□□□ -2.62
IRC23	Q08416	YOR102W	YOR102W	351 nt		-1.33	□□□□□ -2.62
IRC23	Q08416	snR77	snR77	88 nt		-1.35	□□□□□ -2.63
IRC23	Q08416	YGL188C-A	YGL188C-A	141 nt		-1.35	□□□□□ -2.63
IRC23	Q08416	tL(UAA)Q	tL(UAA)Q	85 nt		-1.36	□□□□□ -2.63
IRC23	Q08416	snR52	snR52	92 nt		-1.36	□□□□□ -2.63
IRC23	Q08416	YLR342W-A	YLR342W-A	174 nt		-1.37	□□□□□ -2.63
IRC23	Q08416	YML054C-A	YML054C-A	159 nt		-1.37	□□□□□ -2.63
IRC23	Q08416	YHR175W-A	YHR175W-A	150 nt		-1.38	□□□□□ -2.63
IRC23	Q08416	YLR299C-A	YLR299C-A	93 nt		-1.41	□□□□□ -2.64
IRC23	Q08416	YGR240C-A	YGR240C-A	201 nt		-1.43	□□□□□ -2.64
IRC23	Q08416	YHL015W-A	YHL015W-A	84 nt		-1.45	□□□□□ -2.64
IRC23	Q08416	YBR196C-A	YBR196C-A	150 nt		-1.46	□□□□□ -2.64
IRC23	Q08416	tR(ACG)Q2	tR(ACG)Q2	74 nt		-1.49	□□□□□ -2.65
IRC23	Q08416	snR81	snR81	201 nt		-1.5	□□□□□ -2.65
IRC23	Q08416	snR56	snR56	88 nt		-1.51	□□□□□ -2.65
IRC23	Q08416	YMR315W-A	YMR315W-A	108 nt		-1.51	□□□□□ -2.65
IRC23	Q08416	YOR231C-A	YOR231C-A	201 nt		-1.53	□□□□□ -2.65
IRC23	Q08416	snR80	snR80	171 nt		-1.54	□□□□□ -2.66
IRC23	Q08416	YOR376W-A	YOR376W-A	156 nt		-1.61	□□□□□ -2.67
IRC23	Q08416	YNL198C	YNL198C	303 nt		-1.63	□□□□□ -2.67
IRC23	Q08416	YHR180C-B	YHR180C-B	105 nt		-1.66	□□□□□ -2.68
IRC23	Q08416	YDR406W-A	YDR406W-A	246 nt		-1.68	□□□□□ -2.68
IRC23	Q08416	YDR524W-C	YDR524W-C	90 nt		-1.68	□□□□□ -2.68
IRC23	Q08416	YOR309C	YOR309C	381 nt		-1.71	□□□□□ -2.68
IRC23	Q08416	SOM1	YEL059C-A	225 nt		-1.74	□□□□□ -2.69
IRC23	Q08416	YJL150W	YJL150W	303 nt		-1.74	□□□□□ -2.69
IRC23	Q08416	YBR126W-B	YBR126W-B	144 nt		-1.78	□□□□□ -2.69
IRC23	Q08416	YBL053W	YBL053W	375 nt		-1.81	□□□□□ -2.7
IRC23	Q08416	YOR316C-A	YOR316C-A	210 nt		-1.81	□□□□□ -2.7
IRC23	Q08416	YCR095W-A	YCR095W-A	159 nt		-1.82	□□□□□ -2.7
IRC23	Q08416	YKL106C-A	YKL106C-A	120 nt		-1.83	□□□□□ -2.7
IRC23	Q08416	YBR109W-A	YBR109W-A	225 nt		-1.94	□□□□□ -2.72
IRC23	Q08416	YBR296C-A	YBR296C-A	120 nt		-1.94	□□□□□ -2.72
IRC23	Q08416	RPL41A	YDL184C	78 nt		-1.95	□□□□□ -2.72
IRC23	Q08416	YMR046W-A	YMR046W-A	129 nt		-2.01	□□□□□ -2.73
IRC23	Q08416	YGR151C	YGR151C	336 nt		-2.03	□□□□□ -2.73
IRC23	Q08416	snR6	snR6	112 nt		-2.04	□□□□□ -2.74
IRC23	Q08416	YOL083C-A	YOL083C-A	141 nt		-2.05	□□□□□ -2.74
IRC23	Q08416	YDR543C	YDR543C	300 nt		-2.09	□□□□□ -2.74
IRC23	Q08416	YBL071C-B	YBL071C-B	99 nt		-2.09	□□□□□ -2.74
IRC23	Q08416	snR38	snR38	95 nt		-2.09	□□□□□ -2.74
IRC23	Q08416	YOL164W-A	YOL164W-A	183 nt		-2.13	□□□□□ -2.75
IRC23	Q08416	SPG3	YDR504C	384 nt		-2.15	□□□□□ -2.75
IRC23	Q08416	YOR335W-A	YOR335W-A	81 nt		-2.16	□□□□□ -2.76
IRC23	Q08416	snR73	snR73	106 nt		-2.18	□□□□□ -2.76
IRC23	Q08416	YAL037C-A	YAL037C-A	93 nt		-2.21	□□□□□ -2.76
IRC23	Q08416	YCL001W-B	YCL001W-B	255 nt		-2.22	□□□□□ -2.76
IRC23	Q08416	YOL166W-A	YOL166W-A	156 nt		-2.23	□□□□□ -2.77
IRC23	Q08416	snR47	snR47	99 nt		-2.23	□□□□□ -2.77
IRC23	Q08416	YBL100W-C	YBL100W-C	120 nt		-2.27	□□□□□ -2.77
IRC23	Q08416	tM(CAU)Q1	tM(CAU)Q1	76 nt		-2.28	□□□□□ -2.77
IRC23	Q08416	YLR466C-B	YLR466C-B	117 nt		-2.34	□□□□□ -2.78
IRC23	Q08416	RPL41B	YDL133C-A	78 nt		-2.36	□□□□□ -2.79
IRC23	Q08416	Q0142	Q0142	177 nt		-2.37	□□□□□ -2.79
IRC23	Q08416	YNL338W	YNL338W	159 nt		-2.44	□□□□□ -2.8
IRC23	Q08416	YNL337W	YNL337W	255 nt		-2.45	□□□□□ -2.8
IRC23	Q08416	tV(UAC)Q	tV(UAC)Q	76 nt		-2.47	□□□□□ -2.8
IRC23	Q08416	YKL225W	YKL225W	348 nt		-2.47	□□□□□ -2.8
IRC23	Q08416	tS(GCU)Q1	tS(GCU)Q1	86 nt		-2.5	□□□□□ -2.81
IRC23	Q08416	YDR524C-A	YDR524C-A	120 nt		-2.53	□□□□□ -2.81
IRC23	Q08416	YDL114W-A	YDL114W-A	114 nt		-2.54	□□□□□ -2.82
IRC23	Q08416	snR85	snR85	171 nt		-2.6	□□□□□ -2.83
IRC23	Q08416	YGL041C-B	YGL041C-B	183 nt		-2.72	□□□□□ -2.84
IRC23	Q08416	YDR034C-A	YDR034C-A	177 nt		-2.75	□□□□□ -2.85

Retrieved 100 of 7,029 protein–RNA pairs in 32.2 ms