Protein–RNA interactions for Protein: Q07887

LDB18, Protein LDB18, yeastyeast

Predictions only

Length 179 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
LDB18Q07887 tD(GUC)QtD(GUC)Q 75 nt-1.71□□□□□ -2.68
LDB18Q07887 YLR286W-AYLR286W-A 135 nt-1.72□□□□□ -2.68
LDB18Q07887 CDC65tQ(CUG)M 72 nt-1.73□□□□□ -2.69
LDB18Q07887 YML054C-AYML054C-A 159 nt-1.73□□□□□ -2.69
LDB18Q07887 YNL205CYNL205C 423 nt-1.73□□□□□ -2.69
LDB18Q07887 YBR182C-AYBR182C-A 195 nt-1.74□□□□□ -2.69
LDB18Q07887 YBR178WYBR178W 375 nt-1.75□□□□□ -2.69
LDB18Q07887 snR77snR77 88 nt-1.77□□□□□ -2.69
LDB18Q07887 YDR183C-AYDR183C-A 258 nt-1.77□□□□□ -2.69
LDB18Q07887 YJR157WYJR157W 363 nt-1.78□□□□□ -2.69
LDB18Q07887 YOR329W-AYOR329W-A 210 nt-1.78□□□□□ -2.69
LDB18Q07887 YBR131C-AYBR131C-A 90 nt-1.78□□□□□ -2.69
LDB18Q07887 YDL159C-BYDL159C-B 177 nt-1.81□□□□□ -2.7
LDB18Q07887 YGR240C-AYGR240C-A 201 nt-1.81□□□□□ -2.7
LDB18Q07887 tF(GAA)QtF(GAA)Q 75 nt-1.87□□□□□ -2.71
LDB18Q07887 snR81snR81 201 nt-1.89□□□□□ -2.71
LDB18Q07887 YAL016C-BYAL016C-B 186 nt-1.89□□□□□ -2.71
LDB18Q07887 YMR315W-AYMR315W-A 108 nt-1.89□□□□□ -2.71
LDB18Q07887 YPL038W-AYPL038W-A 192 nt-1.94□□□□□ -2.72
LDB18Q07887 YPR197CYPR197C 564 nt-1.95□□□□□ -2.72
LDB18Q07887 YER181CYER181C 324 nt-1.96□□□□□ -2.72
LDB18Q07887 YLR222C-AYLR222C-A 231 nt-1.97□□□□□ -2.72
LDB18Q07887 YBR126W-BYBR126W-B 144 nt-2.02□□□□□ -2.73
LDB18Q07887 YLR299C-AYLR299C-A 93 nt-2.03□□□□□ -2.73
LDB18Q07887 YNL097C-BYNL097C-B 123 nt-2.03□□□□□ -2.73
LDB18Q07887 YOR376W-AYOR376W-A 156 nt-2.04□□□□□ -2.74
LDB18Q07887 YDR413CYDR413C 576 nt-2.06□□□□□ -2.74
LDB18Q07887 YNL277W-AYNL277W-A 189 nt-2.06□□□□□ -2.74
LDB18Q07887 YBR196C-AYBR196C-A 150 nt-2.08□□□□□ -2.74
LDB18Q07887 snR55snR55 98 nt-2.09□□□□□ -2.74
LDB18Q07887 RPL39YJL189W 156 nt-2.1□□□□□ -2.75
LDB18Q07887 tL(UAA)QtL(UAA)Q 85 nt-2.12□□□□□ -2.75
LDB18Q07887 YGL188C-AYGL188C-A 141 nt-2.12□□□□□ -2.75
LDB18Q07887 YDR157WYDR157W 402 nt-2.13□□□□□ -2.75
LDB18Q07887 YOR102WYOR102W 351 nt-2.13□□□□□ -2.75
LDB18Q07887 snR48snR48 113 nt-2.13□□□□□ -2.75
LDB18Q07887 YKL118WYKL118W 312 nt-2.18□□□□□ -2.76
LDB18Q07887 YDL240C-AYDL240C-A 138 nt-2.2□□□□□ -2.76
LDB18Q07887 YOR309CYOR309C 381 nt-2.21□□□□□ -2.76
LDB18Q07887 YOR302WYOR302W 78 nt-2.22□□□□□ -2.76
LDB18Q07887 YHR180C-BYHR180C-B 105 nt-2.27□□□□□ -2.77
LDB18Q07887 YOL155W-AYOL155W-A 135 nt-2.28□□□□□ -2.77
LDB18Q07887 snR52snR52 92 nt-2.28□□□□□ -2.77
LDB18Q07887 YDR118W-AYDR118W-A 117 nt-2.3□□□□□ -2.78
LDB18Q07887 YOR316C-AYOR316C-A 210 nt-2.3□□□□□ -2.78
LDB18Q07887 YHL015W-AYHL015W-A 84 nt-2.34□□□□□ -2.78
LDB18Q07887 YPR012WYPR012W 255 nt-2.34□□□□□ -2.78
LDB18Q07887 Q0017Q0017 162 nt-2.34□□□□□ -2.78
LDB18Q07887 GIM4YEL003W 336 nt-2.35□□□□□ -2.79
LDB18Q07887 YKL106C-AYKL106C-A 120 nt-2.35□□□□□ -2.79
LDB18Q07887 YLR342W-AYLR342W-A 174 nt-2.38□□□□□ -2.79
LDB18Q07887 YJL150WYJL150W 303 nt-2.41□□□□□ -2.8
LDB18Q07887 YPL152W-AYPL152W-A 99 nt-2.45□□□□□ -2.8
LDB18Q07887 VAR1Q0140 1197 nt-2.5□□□□□ -2.81
LDB18Q07887 YDR543CYDR543C 300 nt-2.53□□□□□ -2.81
LDB18Q07887 YBR109W-AYBR109W-A 225 nt-2.53□□□□□ -2.81
LDB18Q07887 YNL198CYNL198C 303 nt-2.55□□□□□ -2.82
LDB18Q07887 snR65snR65 100 nt-2.58□□□□□ -2.82
LDB18Q07887 YDR524W-CYDR524W-C 90 nt-2.59□□□□□ -2.82
LDB18Q07887 SOM1YEL059C-A 225 nt-2.62□□□□□ -2.83
LDB18Q07887 YBR296C-AYBR296C-A 120 nt-2.62□□□□□ -2.83
LDB18Q07887 snR56snR56 88 nt-2.64□□□□□ -2.83
LDB18Q07887 RPL41AYDL184C 78 nt-2.64□□□□□ -2.83
LDB18Q07887 snR6snR6 112 nt-2.65□□□□□ -2.83
LDB18Q07887 snR80snR80 171 nt-2.66□□□□□ -2.84
LDB18Q07887 YBL053WYBL053W 375 nt-2.67□□□□□ -2.84
LDB18Q07887 YOL083C-AYOL083C-A 141 nt-2.69□□□□□ -2.84
LDB18Q07887 snR38snR38 95 nt-2.69□□□□□ -2.84
LDB18Q07887 YOR335W-AYOR335W-A 81 nt-2.77□□□□□ -2.85
LDB18Q07887 YCR095W-AYCR095W-A 159 nt-2.81□□□□□ -2.86
LDB18Q07887 snR73snR73 106 nt-2.82□□□□□ -2.86
LDB18Q07887 YDR406W-AYDR406W-A 246 nt-2.85□□□□□ -2.87
LDB18Q07887 YBL071C-BYBL071C-B 99 nt-2.85□□□□□ -2.87
LDB18Q07887 YGR151CYGR151C 336 nt-2.88□□□□□ -2.87
LDB18Q07887 YOR231C-AYOR231C-A 201 nt-2.89□□□□□ -2.87
LDB18Q07887 RPL41BYDL133C-A 78 nt-2.91□□□□□ -2.88
LDB18Q07887 YOL164W-AYOL164W-A 183 nt-2.92□□□□□ -2.88
LDB18Q07887 Q0142Q0142 177 nt-2.93□□□□□ -2.88
LDB18Q07887 YOL166W-AYOL166W-A 156 nt-2.95□□□□□ -2.88
LDB18Q07887 snR47snR47 99 nt-2.97□□□□□ -2.88
LDB18Q07887 YHR175W-AYHR175W-A 150 nt-3.03□□□□□ -2.89
LDB18Q07887 YAL037C-AYAL037C-A 93 nt-3.13□□□□□ -2.91
LDB18Q07887 tR(ACG)Q2tR(ACG)Q2 74 nt-3.14□□□□□ -2.91
LDB18Q07887 tV(UAC)QtV(UAC)Q 76 nt-3.17□□□□□ -2.92
LDB18Q07887 YDL114W-AYDL114W-A 114 nt-3.18□□□□□ -2.92
LDB18Q07887 YBL100W-CYBL100W-C 120 nt-3.18□□□□□ -2.92
LDB18Q07887 YDR524C-AYDR524C-A 120 nt-3.23□□□□□ -2.93
LDB18Q07887 snR85snR85 171 nt-3.24□□□□□ -2.93
LDB18Q07887 tS(GCU)Q1tS(GCU)Q1 86 nt-3.24□□□□□ -2.93
LDB18Q07887 YKL225WYKL225W 348 nt-3.24□□□□□ -2.93
LDB18Q07887 YCL001W-BYCL001W-B 255 nt-3.24□□□□□ -2.93
LDB18Q07887 Q0144Q0144 330 nt-3.27□□□□□ -2.93
LDB18Q07887 SPG3YDR504C 384 nt-3.3□□□□□ -2.94
LDB18Q07887 YMR046W-AYMR046W-A 129 nt-3.44□□□□□ -2.96
LDB18Q07887 YJR162CYJR162C 351 nt-3.49□□□□□ -2.97
LDB18Q07887 YNL337WYNL337W 255 nt-3.49□□□□□ -2.97
LDB18Q07887 YDL159W-AYDL159W-A 132 nt-3.57□□□□□ -2.98
LDB18Q07887 snR87snR87 109 nt-3.57□□□□□ -2.98
LDB18Q07887 YGR122C-AYGR122C-A 129 nt-3.59□□□□□ -2.98
LDB18Q07887 YDR034C-AYDR034C-A 177 nt-3.66□□□□□ -3
Retrieved 100 of 7,029 protein–RNA pairs in 7.2 ms