Protein–RNA interactions for Protein: Q07532

IWR1, RNA polymerase II nuclear localization protein IWR1, yeast

Predicted RBP Predictions only

Length 353 aa.

Protein		RNA				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	UniProt Accession	Gene	Ensembl Transcript ID	Length	Transcript Status	Prediction Score	Prediction z-Score	Detected Interaction
IWR1	Q07532	snR39B	snR39B	96 nt		0.56	□□□□□ -2.32
IWR1	Q07532	CSE1	YGL238W	2883 nt		0.56	□□□□□ -2.32
IWR1	Q07532	ORC3	YLL004W	1851 nt		0.56	□□□□□ -2.32
IWR1	Q07532	YLR294C	YLR294C	330 nt		0.55	□□□□□ -2.32
IWR1	Q07532	YKL145W-A	YKL145W-A	93 nt		0.54	□□□□□ -2.32
IWR1	Q07532	FMP27	YLR454W	7887 nt		0.52	□□□□□ -2.33
IWR1	Q07532	YGR146C-A	YGR146C-A	162 nt		0.5	□□□□□ -2.33
IWR1	Q07532	YNL067W-B	YNL067W-B	141 nt		0.5	□□□□□ -2.33
IWR1	Q07532	RCO1	YMR075W	2055 nt		0.5	□□□□□ -2.33
IWR1	Q07532	YOL014W	YOL014W	375 nt		0.48	□□□□□ -2.33
IWR1	Q07532	MYO1	YHR023W	5787 nt		0.46	□□□□□ -2.34
IWR1	Q07532	IQG1	YPL242C	4488 nt		0.46	□□□□□ -2.34
IWR1	Q07532	BIR1	YJR089W	2865 nt		0.44	□□□□□ -2.34
IWR1	Q07532	YBL100W-B	YBL100W-B	5313 nt		0.44	□□□□□ -2.34
IWR1	Q07532	YBR099C	YBR099C	384 nt		0.41	□□□□□ -2.34
IWR1	Q07532	YOR186C-A	YOR186C-A	210 nt		0.4	□□□□□ -2.35
IWR1	Q07532	AI1	Q0050	2505 nt		0.39	□□□□□ -2.35
IWR1	Q07532	MLP2	YIL149C	5040 nt		0.37	□□□□□ -2.35
IWR1	Q07532	YNL205C	YNL205C	423 nt		0.37	□□□□□ -2.35
IWR1	Q07532	YPL060C-A	YPL060C-A	3315 nt		0.35	□□□□□ -2.35
IWR1	Q07532	YGR164W	YGR164W	336 nt		0.34	□□□□□ -2.36
IWR1	Q07532	YJL077W-A	YJL077W-A	87 nt		0.31	□□□□□ -2.36
IWR1	Q07532	YCR095W-A	YCR095W-A	159 nt		0.3	□□□□□ -2.36
IWR1	Q07532	PMP2	YEL017C-A	132 nt		0.3	□□□□□ -2.36
IWR1	Q07532	SOM1	YEL059C-A	225 nt		0.3	□□□□□ -2.36
IWR1	Q07532	EST1	YLR233C	2100 nt		0.3	□□□□□ -2.36
IWR1	Q07532	ESP1	YGR098C	4893 nt		0.29	□□□□□ -2.36
IWR1	Q07532	YOL013W-A	YOL013W-A	192 nt		0.29	□□□□□ -2.36
IWR1	Q07532	snR69	snR69	101 nt		0.28	□□□□□ -2.36
IWR1	Q07532	YCL001W-B	YCL001W-B	255 nt		0.25	□□□□□ -2.37
IWR1	Q07532	SEC10	YLR166C	2616 nt		0.23	□□□□□ -2.37
IWR1	Q07532	YIL071W-A	YIL071W-A	477 nt		0.22	□□□□□ -2.37
IWR1	Q07532	YNL054W-B	YNL054W-B	5250 nt		0.21	□□□□□ -2.38
IWR1	Q07532	SOV1	YMR066W	2697 nt		0.2	□□□□□ -2.38
IWR1	Q07532	YNL266W	YNL266W	420 nt		0.2	□□□□□ -2.38
IWR1	Q07532	RDS3	YPR094W	324 nt		0.2	□□□□□ -2.38
IWR1	Q07532	tQ(UUG)Q	tQ(UUG)Q	76 nt		0.18	□□□□□ -2.38
IWR1	Q07532	tD(GUC)Q	tD(GUC)Q	75 nt		0.17	□□□□□ -2.38
IWR1	Q07532	YNL170W	YNL170W	396 nt		0.17	□□□□□ -2.38
IWR1	Q07532	YER078W-A	YER078W-A	165 nt		0.15	□□□□□ -2.39
IWR1	Q07532	ATP8	Q0080	147 nt		0.14	□□□□□ -2.39
IWR1	Q07532	YBR178W	YBR178W	375 nt		0.12	□□□□□ -2.39
IWR1	Q07532	YBR196C-A	YBR196C-A	150 nt		0.11	□□□□□ -2.39
IWR1	Q07532	snR128	snR128	126 nt		0.08	□□□□□ -2.4
IWR1	Q07532	YLR286W-A	YLR286W-A	135 nt		0.06	□□□□□ -2.4
IWR1	Q07532	YER090C-A	YER090C-A	90 nt		0.05	□□□□□ -2.4
IWR1	Q07532	YDL159C-B	YDL159C-B	177 nt		0.04	□□□□□ -2.4
IWR1	Q07532	Q0092	Q0092	141 nt		0.04	□□□□□ -2.4
IWR1	Q07532	THO2	YNL139C	4794 nt		0.02	□□□□□ -2.41
IWR1	Q07532	snR50	snR50	90 nt		-0.02	□□□□□ -2.41
IWR1	Q07532	YLR299C-A	YLR299C-A	93 nt		-0.04	□□□□□ -2.42
IWR1	Q07532	snR45	snR45	172 nt		-0.04	□□□□□ -2.42
IWR1	Q07532	YML100W-A	YML100W-A	174 nt		-0.07	□□□□□ -2.42
IWR1	Q07532	snR67	snR67	82 nt		-0.17	□□□□□ -2.44
IWR1	Q07532	YAL037C-A	YAL037C-A	93 nt		-0.21	□□□□□ -2.44
IWR1	Q07532	YOL083C-A	YOL083C-A	141 nt		-0.21	□□□□□ -2.44
IWR1	Q07532	YNL103W-A	YNL103W-A	90 nt		-0.24	□□□□□ -2.45
IWR1	Q07532	SBH2	YER019C-A	267 nt		-0.25	□□□□□ -2.45
IWR1	Q07532	snR61	snR61	90 nt		-0.26	□□□□□ -2.45
IWR1	Q07532	YML054C-A	YML054C-A	159 nt		-0.26	□□□□□ -2.45
IWR1	Q07532	YBL071C-B	YBL071C-B	99 nt		-0.26	□□□□□ -2.45
IWR1	Q07532	snR81	snR81	201 nt		-0.28	□□□□□ -2.45
IWR1	Q07532	YHR180C-B	YHR180C-B	105 nt		-0.29	□□□□□ -2.46
IWR1	Q07532	PAU9	YBL108C-A	129 nt		-0.29	□□□□□ -2.46
IWR1	Q07532	YGL041C-B	YGL041C-B	183 nt		-0.33	□□□□□ -2.46
IWR1	Q07532	TFB5	YDR079C-A	219 nt		-0.34	□□□□□ -2.46
IWR1	Q07532	Q0143	Q0143	153 nt		-0.34	□□□□□ -2.46
IWR1	Q07532	tA(UGC)Q	tA(UGC)Q	76 nt		-0.35	□□□□□ -2.47
IWR1	Q07532	YOL164W-A	YOL164W-A	183 nt		-0.36	□□□□□ -2.47
IWR1	Q07532	SKI7	YOR076C	2244 nt		-0.4	□□□□□ -2.47
IWR1	Q07532	YBL100W-C	YBL100W-C	120 nt		-0.41	□□□□□ -2.48
IWR1	Q07532	YJL113W	YJL113W	4647 nt		-0.47	□□□□□ -2.49
IWR1	Q07532	YGR240C-A	YGR240C-A	201 nt		-0.48	□□□□□ -2.49
IWR1	Q07532	snR47	snR47	99 nt		-0.5	□□□□□ -2.49
IWR1	Q07532	RPL41A	YDL184C	78 nt		-0.51	□□□□□ -2.49
IWR1	Q07532	YBR109W-A	YBR109W-A	225 nt		-0.51	□□□□□ -2.49
IWR1	Q07532	YBR296C-A	YBR296C-A	120 nt		-0.51	□□□□□ -2.49
IWR1	Q07532	snR85	snR85	171 nt		-0.53	□□□□□ -2.49
IWR1	Q07532	URB1	YKL014C	5295 nt		-0.58	□□□□□ -2.5
IWR1	Q07532	YMR326C	YMR326C	309 nt		-0.61	□□□□□ -2.51
IWR1	Q07532	snR38	snR38	95 nt		-0.64	□□□□□ -2.51
IWR1	Q07532	tS(GCU)Q1	tS(GCU)Q1	86 nt		-0.65	□□□□□ -2.51
IWR1	Q07532	snR62	snR62	100 nt		-0.66	□□□□□ -2.52
IWR1	Q07532	YHR217C	YHR217C	462 nt		-0.68	□□□□□ -2.52
IWR1	Q07532	snR161	snR161	161 nt		-0.7	□□□□□ -2.52
IWR1	Q07532	YDR034C-A	YDR034C-A	177 nt		-0.72	□□□□□ -2.52
IWR1	Q07532	YHL009W-B	YHL009W-B	5409 nt		-0.74	□□□□□ -2.53
IWR1	Q07532	YKL106C-A	YKL106C-A	120 nt		-0.75	□□□□□ -2.53
IWR1	Q07532	YBL109W	YBL109W	336 nt		-0.78	□□□□□ -2.53
IWR1	Q07532	YOR376W-A	YOR376W-A	156 nt		-0.78	□□□□□ -2.53
IWR1	Q07532	YKL225W	YKL225W	348 nt		-0.79	□□□□□ -2.54
IWR1	Q07532	snR33	snR33	183 nt		-0.8	□□□□□ -2.54
IWR1	Q07532	YOR316C-A	YOR316C-A	210 nt		-0.9	□□□□□ -2.55
IWR1	Q07532	YDR524C-A	YDR524C-A	120 nt		-0.93	□□□□□ -2.56
IWR1	Q07532	tT(UGU)G1	tT(UGU)G1	72 nt		-0.96	□□□□□ -2.56
IWR1	Q07532	tT(UGU)G2	tT(UGU)G2	72 nt		-0.96	□□□□□ -2.56
IWR1	Q07532	tT(UGU)P	tT(UGU)P	72 nt		-0.96	□□□□□ -2.56
IWR1	Q07532	YLL066W-B	YLL066W-B	171 nt		-1	□□□□□ -2.57
IWR1	Q07532	snR64	snR64	101 nt		-1.04	□□□□□ -2.58
IWR1	Q07532	tP(UGG)Q	tP(UGG)Q	72 nt		-1.08	□□□□□ -2.58

Retrieved 100 of 7,029 protein–RNA pairs in 21.8 ms