Protein–RNA interactions for Protein: Q04217

ECM16, Probable ATP-dependent RNA helicase DHR1, yeastyeast

Known RBP Predictions only

Length 1,267 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
ECM16Q04217 YBR072C-AYBR072C-A 162 nt0.89□□□□□ -2.27
ECM16Q04217 AI1Q0050 2505 nt0.89□□□□□ -2.27
ECM16Q04217 ULP2YIL031W 3105 nt0.88□□□□□ -2.27
ECM16Q04217 YMR326CYMR326C 309 nt0.88□□□□□ -2.27
ECM16Q04217 YBL109WYBL109W 336 nt0.88□□□□□ -2.27
ECM16Q04217 YPR159C-AYPR159C-A 102 nt0.87□□□□□ -2.27
ECM16Q04217 GLG1YKR058W 1851 nt0.86□□□□□ -2.27
ECM16Q04217 tT(AGU)BtT(AGU)B 73 nt0.85□□□□□ -2.27
ECM16Q04217 tT(AGU)CtT(AGU)C 73 nt0.85□□□□□ -2.27
ECM16Q04217 tT(AGU)DtT(AGU)D 73 nt0.85□□□□□ -2.27
ECM16Q04217 tT(AGU)HtT(AGU)H 73 nt0.85□□□□□ -2.27
ECM16Q04217 tT(AGU)I1tT(AGU)I1 73 nt0.85□□□□□ -2.27
ECM16Q04217 tT(AGU)I2tT(AGU)I2 73 nt0.85□□□□□ -2.27
ECM16Q04217 tT(AGU)JtT(AGU)J 73 nt0.85□□□□□ -2.27
ECM16Q04217 tT(AGU)N1tT(AGU)N1 73 nt0.85□□□□□ -2.27
ECM16Q04217 tT(AGU)N2tT(AGU)N2 73 nt0.85□□□□□ -2.27
ECM16Q04217 tT(AGU)O1tT(AGU)O1 73 nt0.85□□□□□ -2.27
ECM16Q04217 tT(AGU)O2tT(AGU)O2 73 nt0.85□□□□□ -2.27
ECM16Q04217 YBR178WYBR178W 375 nt0.85□□□□□ -2.27
ECM16Q04217 MLP1YKR095W 5628 nt0.83□□□□□ -2.28
ECM16Q04217 YNL266WYNL266W 420 nt0.83□□□□□ -2.28
ECM16Q04217 MLP2YIL149C 5040 nt0.83□□□□□ -2.28
ECM16Q04217 YGL041C-BYGL041C-B 183 nt0.82□□□□□ -2.28
ECM16Q04217 YLL006W-AYLL006W-A 177 nt0.81□□□□□ -2.28
ECM16Q04217 RPM2YML091C 3609 nt0.81□□□□□ -2.28
ECM16Q04217 YNL054W-BYNL054W-B 5250 nt0.8□□□□□ -2.28
ECM16Q04217 CSE1YGL238W 2883 nt0.8□□□□□ -2.28
ECM16Q04217 RCO1YMR075W 2055 nt0.79□□□□□ -2.28
ECM16Q04217 NNF2YGR089W 2811 nt0.79□□□□□ -2.28
ECM16Q04217 YHR217CYHR217C 462 nt0.78□□□□□ -2.28
ECM16Q04217 FMP27YLR454W 7887 nt0.77□□□□□ -2.29
ECM16Q04217 YMR272W-AYMR272W-A 114 nt0.75□□□□□ -2.29
ECM16Q04217 YBR196C-AYBR196C-A 150 nt0.75□□□□□ -2.29
ECM16Q04217 SBH1YER087C-B 249 nt0.74□□□□□ -2.29
ECM16Q04217 SEC10YLR166C 2616 nt0.73□□□□□ -2.29
ECM16Q04217 YOR192C-BYOR192C-B 5313 nt0.72□□□□□ -2.29
ECM16Q04217 NIP1YMR309C 2439 nt0.7□□□□□ -2.3
ECM16Q04217 PET111YMR257C 2403 nt0.68□□□□□ -2.3
ECM16Q04217 snR81snR81 201 nt0.68□□□□□ -2.3
ECM16Q04217 YAL037C-AYAL037C-A 93 nt0.67□□□□□ -2.3
ECM16Q04217 YOL083C-AYOL083C-A 141 nt0.67□□□□□ -2.3
ECM16Q04217 EST1YLR233C 2100 nt0.67□□□□□ -2.3
ECM16Q04217 snR69snR69 101 nt0.66□□□□□ -2.3
ECM16Q04217 YDL247W-AYDL247W-A 75 nt0.66□□□□□ -2.3
ECM16Q04217 tD(GUC)QtD(GUC)Q 75 nt0.66□□□□□ -2.3
ECM16Q04217 YER078W-AYER078W-A 165 nt0.64□□□□□ -2.31
ECM16Q04217 RPS26AYGL189C 360 nt0.64□□□□□ -2.31
ECM16Q04217 UTP10YJL109C 5310 nt0.64□□□□□ -2.31
ECM16Q04217 YDR371C-AYDR371C-A 105 nt0.63□□□□□ -2.31
ECM16Q04217 YJL077W-AYJL077W-A 87 nt0.63□□□□□ -2.31
ECM16Q04217 YLR286W-AYLR286W-A 135 nt0.62□□□□□ -2.31
ECM16Q04217 RDS3YPR094W 324 nt0.61□□□□□ -2.31
ECM16Q04217 YDL159C-BYDL159C-B 177 nt0.58□□□□□ -2.32
ECM16Q04217 tQ(UUG)QtQ(UUG)Q 76 nt0.58□□□□□ -2.32
ECM16Q04217 tS(GCU)Q1tS(GCU)Q1 86 nt0.58□□□□□ -2.32
ECM16Q04217 YBL071C-BYBL071C-B 99 nt0.58□□□□□ -2.32
ECM16Q04217 ORC3YLL004W 1851 nt0.57□□□□□ -2.32
ECM16Q04217 YLR299C-AYLR299C-A 93 nt0.57□□□□□ -2.32
ECM16Q04217 YBL100W-CYBL100W-C 120 nt0.56□□□□□ -2.32
ECM16Q04217 YPL060C-AYPL060C-A 3315 nt0.56□□□□□ -2.32
ECM16Q04217 YOL164W-AYOL164W-A 183 nt0.52□□□□□ -2.33
ECM16Q04217 ESP1YGR098C 4893 nt0.5□□□□□ -2.33
ECM16Q04217 snR62snR62 100 nt0.49□□□□□ -2.33
ECM16Q04217 YGR240C-AYGR240C-A 201 nt0.47□□□□□ -2.33
ECM16Q04217 YLL066W-BYLL066W-B 171 nt0.47□□□□□ -2.33
ECM16Q04217 YOR186C-AYOR186C-A 210 nt0.45□□□□□ -2.34
ECM16Q04217 YBL100W-BYBL100W-B 5313 nt0.44□□□□□ -2.34
ECM16Q04217 snR45snR45 172 nt0.44□□□□□ -2.34
ECM16Q04217 snR47snR47 99 nt0.44□□□□□ -2.34
ECM16Q04217 YER090C-AYER090C-A 90 nt0.43□□□□□ -2.34
ECM16Q04217 YDR034C-AYDR034C-A 177 nt0.42□□□□□ -2.34
ECM16Q04217 YHR180C-BYHR180C-B 105 nt0.42□□□□□ -2.34
ECM16Q04217 snR50snR50 90 nt0.42□□□□□ -2.34
ECM16Q04217 YML054C-AYML054C-A 159 nt0.41□□□□□ -2.34
ECM16Q04217 YOL013W-AYOL013W-A 192 nt0.35□□□□□ -2.35
ECM16Q04217 snR67snR67 82 nt0.31□□□□□ -2.36
ECM16Q04217 RPL41AYDL184C 78 nt0.31□□□□□ -2.36
ECM16Q04217 SOV1YMR066W 2697 nt0.3□□□□□ -2.36
ECM16Q04217 YBR109W-AYBR109W-A 225 nt0.28□□□□□ -2.36
ECM16Q04217 YBR296C-AYBR296C-A 120 nt0.28□□□□□ -2.36
ECM16Q04217 snR128snR128 126 nt0.22□□□□□ -2.37
ECM16Q04217 YJL113WYJL113W 4647 nt0.22□□□□□ -2.37
ECM16Q04217 YKL225WYKL225W 348 nt0.21□□□□□ -2.38
ECM16Q04217 YML100W-AYML100W-A 174 nt0.18□□□□□ -2.38
ECM16Q04217 snR38snR38 95 nt0.17□□□□□ -2.38
ECM16Q04217 snR64snR64 101 nt0.16□□□□□ -2.38
ECM16Q04217 PAU9YBL108C-A 129 nt0.1□□□□□ -2.39
ECM16Q04217 SKI7YOR076C 2244 nt0.09□□□□□ -2.4
ECM16Q04217 snR53snR53 91 nt0.04□□□□□ -2.4
ECM16Q04217 YKL106C-AYKL106C-A 120 nt0□□□□□ -2.41
ECM16Q04217 YDL159W-AYDL159W-A 132 nt-0.05□□□□□ -2.42
ECM16Q04217 SBH2YER019C-A 267 nt-0.07□□□□□ -2.42
ECM16Q04217 YGR122C-AYGR122C-A 129 nt-0.07□□□□□ -2.42
ECM16Q04217 tA(UGC)QtA(UGC)Q 76 nt-0.08□□□□□ -2.42
ECM16Q04217 YOR376W-AYOR376W-A 156 nt-0.13□□□□□ -2.43
ECM16Q04217 YOR316C-AYOR316C-A 210 nt-0.2□□□□□ -2.44
ECM16Q04217 YHL009W-BYHL009W-B 5409 nt-0.2□□□□□ -2.44
ECM16Q04217 YNR077CYNR077C 255 nt-0.21□□□□□ -2.44
ECM16Q04217 snR161snR161 161 nt-0.22□□□□□ -2.44
ECM16Q04217 YDL114W-AYDL114W-A 114 nt-0.24□□□□□ -2.45
Retrieved 100 of 7,029 protein–RNA pairs in 7.7 ms