Protein–RNA interactions for Protein: Q04053

SNX41, Sorting nexin-41, yeastyeast

Predictions only

Length 625 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SNX41Q04053 SBH2YER019C-A 267 nt-0.34□□□□□ -2.46
SNX41Q04053 tM(CAU)Q2tM(CAU)Q2 78 nt-0.37□□□□□ -2.47
SNX41Q04053 YJL077W-AYJL077W-A 87 nt-0.37□□□□□ -2.47
SNX41Q04053 SEC10YLR166C 2616 nt-0.42□□□□□ -2.48
SNX41Q04053 snR80snR80 171 nt-0.44□□□□□ -2.48
SNX41Q04053 URB1YKL014C 5295 nt-0.45□□□□□ -2.48
SNX41Q04053 YGR146C-AYGR146C-A 162 nt-0.45□□□□□ -2.48
SNX41Q04053 snR39BsnR39B 96 nt-0.45□□□□□ -2.48
SNX41Q04053 snR69snR69 101 nt-0.46□□□□□ -2.48
SNX41Q04053 Q0142Q0142 177 nt-0.46□□□□□ -2.48
SNX41Q04053 YML100W-AYML100W-A 174 nt-0.46□□□□□ -2.48
SNX41Q04053 YOR329W-AYOR329W-A 210 nt-0.47□□□□□ -2.48
SNX41Q04053 tQ(UUG)QtQ(UUG)Q 76 nt-0.48□□□□□ -2.49
SNX41Q04053 YJL113WYJL113W 4647 nt-0.5□□□□□ -2.49
SNX41Q04053 YIL071W-AYIL071W-A 477 nt-0.5□□□□□ -2.49
SNX41Q04053 snR52snR52 92 nt-0.51□□□□□ -2.49
SNX41Q04053 YLR342W-AYLR342W-A 174 nt-0.53□□□□□ -2.49
SNX41Q04053 YDL007C-AYDL007C-A 258 nt-0.54□□□□□ -2.5
SNX41Q04053 PMP2YEL017C-A 132 nt-0.54□□□□□ -2.5
SNX41Q04053 snR48snR48 113 nt-0.54□□□□□ -2.5
SNX41Q04053 RDS3YPR094W 324 nt-0.56□□□□□ -2.5
SNX41Q04053 tA(UGC)QtA(UGC)Q 76 nt-0.59□□□□□ -2.5
SNX41Q04053 YER090C-AYER090C-A 90 nt-0.59□□□□□ -2.5
SNX41Q04053 YNL067W-BYNL067W-B 141 nt-0.62□□□□□ -2.51
SNX41Q04053 PAU9YBL108C-A 129 nt-0.62□□□□□ -2.51
SNX41Q04053 tL(UAA)QtL(UAA)Q 85 nt-0.63□□□□□ -2.51
SNX41Q04053 YNL266WYNL266W 420 nt-0.65□□□□□ -2.51
SNX41Q04053 YNL205CYNL205C 423 nt-0.66□□□□□ -2.52
SNX41Q04053 snR50snR50 90 nt-0.66□□□□□ -2.52
SNX41Q04053 YDR406W-AYDR406W-A 246 nt-0.67□□□□□ -2.52
SNX41Q04053 YHL015W-AYHL015W-A 84 nt-0.67□□□□□ -2.52
SNX41Q04053 tD(GUC)QtD(GUC)Q 75 nt-0.68□□□□□ -2.52
SNX41Q04053 JLP2YMR132C 627 nt-0.69□□□□□ -2.52
SNX41Q04053 YOR102WYOR102W 351 nt-0.69□□□□□ -2.52
SNX41Q04053 tT(UGU)G1tT(UGU)G1 72 nt-0.72□□□□□ -2.52
SNX41Q04053 tT(UGU)G2tT(UGU)G2 72 nt-0.72□□□□□ -2.52
SNX41Q04053 tT(UGU)PtT(UGU)P 72 nt-0.72□□□□□ -2.52
SNX41Q04053 YLR286W-AYLR286W-A 135 nt-0.75□□□□□ -2.53
SNX41Q04053 YBR178WYBR178W 375 nt-0.75□□□□□ -2.53
SNX41Q04053 YHL009W-BYHL009W-B 5409 nt-0.75□□□□□ -2.53
SNX41Q04053 snR33snR33 183 nt-0.78□□□□□ -2.53
SNX41Q04053 YDL159C-BYDL159C-B 177 nt-0.79□□□□□ -2.54
SNX41Q04053 snR67snR67 82 nt-0.81□□□□□ -2.54
SNX41Q04053 YJL150WYJL150W 303 nt-0.82□□□□□ -2.54
SNX41Q04053 YMR046W-AYMR046W-A 129 nt-0.82□□□□□ -2.54
SNX41Q04053 YNL198CYNL198C 303 nt-0.84□□□□□ -2.54
SNX41Q04053 snR161snR161 161 nt-0.84□□□□□ -2.54
SNX41Q04053 YNR077CYNR077C 255 nt-0.89□□□□□ -2.55
SNX41Q04053 YBR196C-AYBR196C-A 150 nt-0.9□□□□□ -2.55
SNX41Q04053 SPG3YDR504C 384 nt-0.93□□□□□ -2.56
SNX41Q04053 YLR299C-AYLR299C-A 93 nt-0.94□□□□□ -2.56
SNX41Q04053 YBL053WYBL053W 375 nt-0.94□□□□□ -2.56
SNX41Q04053 SKI7YOR076C 2244 nt-0.95□□□□□ -2.56
SNX41Q04053 YBR223W-AYBR223W-A 120 nt-0.97□□□□□ -2.56
SNX41Q04053 SOM1YEL059C-A 225 nt-1.01□□□□□ -2.57
SNX41Q04053 tM(CAU)Q1tM(CAU)Q1 76 nt-1.01□□□□□ -2.57
SNX41Q04053 YCR095W-AYCR095W-A 159 nt-1.08□□□□□ -2.58
SNX41Q04053 YML054C-AYML054C-A 159 nt-1.12□□□□□ -2.59
SNX41Q04053 YLR466C-BYLR466C-B 117 nt-1.19□□□□□ -2.6
SNX41Q04053 YHR180C-BYHR180C-B 105 nt-1.2□□□□□ -2.6
SNX41Q04053 YGR151CYGR151C 336 nt-1.22□□□□□ -2.6
SNX41Q04053 tP(UGG)QtP(UGG)Q 72 nt-1.23□□□□□ -2.61
SNX41Q04053 YNL338WYNL338W 159 nt-1.33□□□□□ -2.62
SNX41Q04053 YCL001W-BYCL001W-B 255 nt-1.35□□□□□ -2.63
SNX41Q04053 YOR376W-AYOR376W-A 156 nt-1.38□□□□□ -2.63
SNX41Q04053 YGR240C-AYGR240C-A 201 nt-1.42□□□□□ -2.64
SNX41Q04053 YOL083C-AYOL083C-A 141 nt-1.42□□□□□ -2.64
SNX41Q04053 CDC65tQ(CUG)M 72 nt-1.45□□□□□ -2.64
SNX41Q04053 snR77snR77 88 nt-1.46□□□□□ -2.64
SNX41Q04053 YBL071C-BYBL071C-B 99 nt-1.46□□□□□ -2.64
SNX41Q04053 YBR296C-AYBR296C-A 120 nt-1.46□□□□□ -2.64
SNX41Q04053 RPL41AYDL184C 78 nt-1.47□□□□□ -2.64
SNX41Q04053 YNL337WYNL337W 255 nt-1.47□□□□□ -2.64
SNX41Q04053 YBR109W-AYBR109W-A 225 nt-1.47□□□□□ -2.64
SNX41Q04053 YKL106C-AYKL106C-A 120 nt-1.48□□□□□ -2.65
SNX41Q04053 tY(GUA)QtY(GUA)Q 84 nt-1.49□□□□□ -2.65
SNX41Q04053 YAL037C-AYAL037C-A 93 nt-1.51□□□□□ -2.65
SNX41Q04053 YOL164W-AYOL164W-A 183 nt-1.53□□□□□ -2.65
SNX41Q04053 YOR316C-AYOR316C-A 210 nt-1.53□□□□□ -2.65
SNX41Q04053 Q0032Q0032 291 nt-1.54□□□□□ -2.66
SNX41Q04053 snR38snR38 95 nt-1.6□□□□□ -2.67
SNX41Q04053 snR81snR81 201 nt-1.62□□□□□ -2.67
SNX41Q04053 YGL007C-AYGL007C-A 87 nt-1.63□□□□□ -2.67
SNX41Q04053 YBL100W-CYBL100W-C 120 nt-1.64□□□□□ -2.67
SNX41Q04053 snR47snR47 99 nt-1.64□□□□□ -2.67
SNX41Q04053 YMR315W-AYMR315W-A 108 nt-1.65□□□□□ -2.67
SNX41Q04053 YBR126W-BYBR126W-B 144 nt-1.89□□□□□ -2.71
SNX41Q04053 YGL041C-BYGL041C-B 183 nt-1.9□□□□□ -2.71
SNX41Q04053 tS(GCU)Q1tS(GCU)Q1 86 nt-1.9□□□□□ -2.71
SNX41Q04053 YKL225WYKL225W 348 nt-1.91□□□□□ -2.72
SNX41Q04053 snR61snR61 90 nt-1.93□□□□□ -2.72
SNX41Q04053 YNL103W-AYNL103W-A 90 nt-1.93□□□□□ -2.72
SNX41Q04053 YLR294CYLR294C 330 nt-1.94□□□□□ -2.72
SNX41Q04053 YOR225WYOR225W 330 nt-1.97□□□□□ -2.72
SNX41Q04053 YOR309CYOR309C 381 nt-2.03□□□□□ -2.73
SNX41Q04053 YNL170WYNL170W 396 nt-2.07□□□□□ -2.74
SNX41Q04053 YDR034C-AYDR034C-A 177 nt-2.08□□□□□ -2.74
SNX41Q04053 snR62snR62 100 nt-2.11□□□□□ -2.75
SNX41Q04053 snR6snR6 112 nt-2.14□□□□□ -2.75
SNX41Q04053 YDL114W-AYDL114W-A 114 nt-2.14□□□□□ -2.75
Retrieved 100 of 7,029 protein–RNA pairs in 34 ms