Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
HIST1H1AQ02539 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
HIST1H1AQ02539 AC112907.3-201ENST00000577781 2400 ntBASIC15.21■□□□□ 0.03
HIST1H1AQ02539 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC15.21■□□□□ 0.03
HIST1H1AQ02539 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
HIST1H1AQ02539 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC15.21■□□□□ 0.03
HIST1H1AQ02539 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
HIST1H1AQ02539 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
HIST1H1AQ02539 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC15.21■□□□□ 0.03
HIST1H1AQ02539 AC034268.1-201ENST00000441047 882 ntBASIC15.21■□□□□ 0.03
HIST1H1AQ02539 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
HIST1H1AQ02539 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
HIST1H1AQ02539 NTF6G-201ENST00000591094 616 ntBASIC15.21■□□□□ 0.03
HIST1H1AQ02539 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
HIST1H1AQ02539 FAM21FP-204ENST00000608637 956 ntBASIC15.21■□□□□ 0.03
HIST1H1AQ02539 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC15.21■□□□□ 0.03
HIST1H1AQ02539 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC15.21■□□□□ 0.03
HIST1H1AQ02539 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
HIST1H1AQ02539 MYCNOS-205ENST00000641950 531 ntBASIC15.21■□□□□ 0.03
HIST1H1AQ02539 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
HIST1H1AQ02539 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
HIST1H1AQ02539 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
HIST1H1AQ02539 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
HIST1H1AQ02539 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
HIST1H1AQ02539 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
HIST1H1AQ02539 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
HIST1H1AQ02539 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
HIST1H1AQ02539 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.02
HIST1H1AQ02539 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
HIST1H1AQ02539 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
HIST1H1AQ02539 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HIST1H1AQ02539 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
HIST1H1AQ02539 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
HIST1H1AQ02539 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC15.2■□□□□ 0.02
HIST1H1AQ02539 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HIST1H1AQ02539 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HIST1H1AQ02539 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
HIST1H1AQ02539 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
HIST1H1AQ02539 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC15.2■□□□□ 0.02
HIST1H1AQ02539 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
HIST1H1AQ02539 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HIST1H1AQ02539 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
HIST1H1AQ02539 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
HIST1H1AQ02539 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
HIST1H1AQ02539 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC15.2■□□□□ 0.02
HIST1H1AQ02539 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC15.2■□□□□ 0.02
HIST1H1AQ02539 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
HIST1H1AQ02539 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC15.2■□□□□ 0.02
HIST1H1AQ02539 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC15.2■□□□□ 0.02
HIST1H1AQ02539 KRT18P61-201ENST00000585825 1298 ntBASIC15.2■□□□□ 0.02
HIST1H1AQ02539 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC15.2■□□□□ 0.02
HIST1H1AQ02539 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
HIST1H1AQ02539 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HIST1H1AQ02539 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC15.2■□□□□ 0.02
HIST1H1AQ02539 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC15.2■□□□□ 0.02
HIST1H1AQ02539 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
HIST1H1AQ02539 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC15.19■□□□□ 0.02
HIST1H1AQ02539 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HIST1H1AQ02539 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC15.19■□□□□ 0.02
HIST1H1AQ02539 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
HIST1H1AQ02539 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
HIST1H1AQ02539 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC15.19■□□□□ 0.02
HIST1H1AQ02539 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HIST1H1AQ02539 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HIST1H1AQ02539 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC15.19■□□□□ 0.02
HIST1H1AQ02539 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HIST1H1AQ02539 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC15.19■□□□□ 0.02
HIST1H1AQ02539 HACD1-201ENST00000326961 773 ntTSL 2 BASIC15.19■□□□□ 0.02
HIST1H1AQ02539 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
HIST1H1AQ02539 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
HIST1H1AQ02539 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC15.19■□□□□ 0.02
HIST1H1AQ02539 CD44-222ENST00000526025 1052 ntTSL 2 BASIC15.19■□□□□ 0.02
HIST1H1AQ02539 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HIST1H1AQ02539 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HIST1H1AQ02539 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HIST1H1AQ02539 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC15.19■□□□□ 0.02
HIST1H1AQ02539 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HIST1H1AQ02539 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
HIST1H1AQ02539 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
HIST1H1AQ02539 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC15.19■□□□□ 0.02
HIST1H1AQ02539 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HIST1H1AQ02539 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
HIST1H1AQ02539 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HIST1H1AQ02539 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
HIST1H1AQ02539 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC15.18■□□□□ 0.02
HIST1H1AQ02539 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC15.18■□□□□ 0.02
HIST1H1AQ02539 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
HIST1H1AQ02539 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
HIST1H1AQ02539 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC15.18■□□□□ 0.02
HIST1H1AQ02539 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
HIST1H1AQ02539 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC15.18■□□□□ 0.02
HIST1H1AQ02539 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
HIST1H1AQ02539 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
HIST1H1AQ02539 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
HIST1H1AQ02539 BMP1-204ENST00000397814 836 ntTSL 4 BASIC15.18■□□□□ 0.02
HIST1H1AQ02539 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
HIST1H1AQ02539 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC15.18■□□□□ 0.02
HIST1H1AQ02539 AC098818.2-201ENST00000564925 2320 ntBASIC15.18■□□□□ 0.02
HIST1H1AQ02539 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
HIST1H1AQ02539 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC15.18■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms