Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HIST1H3AP68431 SERP1-205ENST00000487153 657 ntTSL 4 BASIC17.43■□□□□ 0.38
HIST1H3AP68431 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
HIST1H3AP68431 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HIST1H3AP68431 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
HIST1H3AP68431 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HIST1H3AP68431 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC17.43■□□□□ 0.38
HIST1H3AP68431 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HIST1H3AP68431 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
HIST1H3AP68431 MOK-233ENST00000524214 1539 ntTSL 2 BASIC17.42■□□□□ 0.38
HIST1H3AP68431 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
HIST1H3AP68431 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
HIST1H3AP68431 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC17.42■□□□□ 0.38
HIST1H3AP68431 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HIST1H3AP68431 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HIST1H3AP68431 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HIST1H3AP68431 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
HIST1H3AP68431 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HIST1H3AP68431 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC17.42■□□□□ 0.38
HIST1H3AP68431 MAP2K4P1-201ENST00000438453 1195 ntBASIC17.42■□□□□ 0.38
HIST1H3AP68431 TSPY6P-201ENST00000448518 926 ntBASIC17.42■□□□□ 0.38
HIST1H3AP68431 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HIST1H3AP68431 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC17.42■□□□□ 0.38
HIST1H3AP68431 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
HIST1H3AP68431 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC17.42■□□□□ 0.38
HIST1H3AP68431 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
HIST1H3AP68431 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
HIST1H3AP68431 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC17.42■□□□□ 0.38
HIST1H3AP68431 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HIST1H3AP68431 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HIST1H3AP68431 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HIST1H3AP68431 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC17.41■□□□□ 0.38
HIST1H3AP68431 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HIST1H3AP68431 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC17.41■□□□□ 0.38
HIST1H3AP68431 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC17.41■□□□□ 0.38
HIST1H3AP68431 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC17.41■□□□□ 0.38
HIST1H3AP68431 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC17.41■□□□□ 0.38
HIST1H3AP68431 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HIST1H3AP68431 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
HIST1H3AP68431 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
HIST1H3AP68431 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HIST1H3AP68431 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
HIST1H3AP68431 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
HIST1H3AP68431 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HIST1H3AP68431 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
HIST1H3AP68431 SERPINH1P1-201ENST00000419794 1249 ntBASIC17.41■□□□□ 0.38
HIST1H3AP68431 NME6-213ENST00000451657 871 ntTSL 2 BASIC17.41■□□□□ 0.38
HIST1H3AP68431 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
HIST1H3AP68431 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
HIST1H3AP68431 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC17.41■□□□□ 0.38
HIST1H3AP68431 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
HIST1H3AP68431 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC17.41■□□□□ 0.38
HIST1H3AP68431 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
HIST1H3AP68431 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC17.41■□□□□ 0.38
HIST1H3AP68431 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HIST1H3AP68431 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HIST1H3AP68431 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC17.41■□□□□ 0.38
HIST1H3AP68431 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC17.41■□□□□ 0.38
HIST1H3AP68431 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
HIST1H3AP68431 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
HIST1H3AP68431 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HIST1H3AP68431 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC17.41■□□□□ 0.38
HIST1H3AP68431 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
HIST1H3AP68431 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC17.41■□□□□ 0.38
HIST1H3AP68431 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HIST1H3AP68431 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HIST1H3AP68431 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
HIST1H3AP68431 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HIST1H3AP68431 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC17.4■□□□□ 0.38
HIST1H3AP68431 STK25-204ENST00000405585 1643 ntTSL 2 BASIC17.4■□□□□ 0.38
HIST1H3AP68431 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HIST1H3AP68431 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
HIST1H3AP68431 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
HIST1H3AP68431 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HIST1H3AP68431 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HIST1H3AP68431 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
HIST1H3AP68431 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HIST1H3AP68431 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HIST1H3AP68431 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC17.4■□□□□ 0.38
HIST1H3AP68431 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
HIST1H3AP68431 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
HIST1H3AP68431 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC17.4■□□□□ 0.38
HIST1H3AP68431 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC17.4■□□□□ 0.38
HIST1H3AP68431 AC092666.2-201ENST00000613287 246 ntBASIC17.4■□□□□ 0.38
HIST1H3AP68431 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC17.4■□□□□ 0.38
HIST1H3AP68431 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HIST1H3AP68431 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
HIST1H3AP68431 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC17.4■□□□□ 0.38
HIST1H3AP68431 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
HIST1H3AP68431 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HIST1H3AP68431 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
HIST1H3AP68431 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
HIST1H3AP68431 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC17.39■□□□□ 0.37
HIST1H3AP68431 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC17.39■□□□□ 0.37
HIST1H3AP68431 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
HIST1H3AP68431 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HIST1H3AP68431 SLC29A4P1-201ENST00000398760 971 ntBASIC17.39■□□□□ 0.37
HIST1H3AP68431 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
HIST1H3AP68431 DUSP5P2-201ENST00000426873 1033 ntBASIC17.39■□□□□ 0.37
HIST1H3AP68431 OR2A1-AS1-201ENST00000462305 773 ntBASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms