Protein–RNA interactions for Protein: P56377

AP1S2, AP-1 complex subunit sigma-2, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S2P56377 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
AP1S2P56377 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC19.42■□□□□ 0.7
AP1S2P56377 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
AP1S2P56377 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
AP1S2P56377 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
AP1S2P56377 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
AP1S2P56377 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
AP1S2P56377 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
AP1S2P56377 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
AP1S2P56377 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
AP1S2P56377 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
AP1S2P56377 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
AP1S2P56377 MFF-205ENST00000354503 1085 ntTSL 2 BASIC19.41■□□□□ 0.7
AP1S2P56377 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC19.41■□□□□ 0.7
AP1S2P56377 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
AP1S2P56377 AC073210.2-201ENST00000430369 194 ntBASIC19.41■□□□□ 0.7
AP1S2P56377 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC19.41■□□□□ 0.7
AP1S2P56377 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC19.41■□□□□ 0.7
AP1S2P56377 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC19.41■□□□□ 0.7
AP1S2P56377 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
AP1S2P56377 PCDHAC2-203ENST00000615316 3011 ntBASIC19.41■□□□□ 0.7
AP1S2P56377 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
AP1S2P56377 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC19.4■□□□□ 0.7
AP1S2P56377 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
AP1S2P56377 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
AP1S2P56377 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
AP1S2P56377 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
AP1S2P56377 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC19.4■□□□□ 0.7
AP1S2P56377 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
AP1S2P56377 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC19.4■□□□□ 0.7
AP1S2P56377 RHEB-204ENST00000472642 900 ntTSL 3 BASIC19.4■□□□□ 0.7
AP1S2P56377 AC097658.1-201ENST00000475555 843 ntBASIC19.4■□□□□ 0.7
AP1S2P56377 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
AP1S2P56377 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC19.4■□□□□ 0.7
AP1S2P56377 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC19.4■□□□□ 0.7
AP1S2P56377 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC19.4■□□□□ 0.7
AP1S2P56377 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC19.4■□□□□ 0.7
AP1S2P56377 MYC-209ENST00000641252 345 ntBASIC19.4■□□□□ 0.7
AP1S2P56377 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
AP1S2P56377 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
AP1S2P56377 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC19.4■□□□□ 0.7
AP1S2P56377 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
AP1S2P56377 LBX2-AS1-202ENST00000603175 2083 ntBASIC19.4■□□□□ 0.7
AP1S2P56377 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
AP1S2P56377 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
AP1S2P56377 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
AP1S2P56377 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC19.4■□□□□ 0.7
AP1S2P56377 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
AP1S2P56377 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
AP1S2P56377 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC19.4■□□□□ 0.7
AP1S2P56377 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC19.4■□□□□ 0.7
AP1S2P56377 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
AP1S2P56377 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
AP1S2P56377 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
AP1S2P56377 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
AP1S2P56377 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
AP1S2P56377 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
AP1S2P56377 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
AP1S2P56377 AL390719.1-204ENST00000412397 1219 ntBASIC19.39■□□□□ 0.69
AP1S2P56377 BET1L-207ENST00000529614 560 ntTSL 5 BASIC19.39■□□□□ 0.69
AP1S2P56377 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC19.39■□□□□ 0.69
AP1S2P56377 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC19.39■□□□□ 0.69
AP1S2P56377 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC19.39■□□□□ 0.69
AP1S2P56377 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC19.39■□□□□ 0.69
AP1S2P56377 GAMT-205ENST00000640762 751 ntTSL 5 BASIC19.39■□□□□ 0.69
AP1S2P56377 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
AP1S2P56377 STK25-204ENST00000405585 1643 ntTSL 2 BASIC19.39■□□□□ 0.69
AP1S2P56377 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
AP1S2P56377 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
AP1S2P56377 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
AP1S2P56377 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
AP1S2P56377 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
AP1S2P56377 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
AP1S2P56377 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC19.39■□□□□ 0.69
AP1S2P56377 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC19.39■□□□□ 0.69
AP1S2P56377 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
AP1S2P56377 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
AP1S2P56377 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
AP1S2P56377 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC19.38■□□□□ 0.69
AP1S2P56377 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
AP1S2P56377 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC19.38■□□□□ 0.69
AP1S2P56377 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC19.38■□□□□ 0.69
AP1S2P56377 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
AP1S2P56377 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC19.38■□□□□ 0.69
AP1S2P56377 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
AP1S2P56377 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
AP1S2P56377 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC19.38■□□□□ 0.69
AP1S2P56377 AC005829.2-201ENST00000571422 1056 ntBASIC19.38■□□□□ 0.69
AP1S2P56377 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC19.38■□□□□ 0.69
AP1S2P56377 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC19.38■□□□□ 0.69
AP1S2P56377 AC104771.1-201ENST00000603335 964 ntBASIC19.38■□□□□ 0.69
AP1S2P56377 AC009237.14-201ENST00000609975 1594 ntBASIC19.38■□□□□ 0.69
AP1S2P56377 AP001271.2-201ENST00000624018 1556 ntBASIC19.38■□□□□ 0.69
AP1S2P56377 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
AP1S2P56377 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
AP1S2P56377 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
AP1S2P56377 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
AP1S2P56377 BID-204ENST00000399767 2129 ntTSL 2 BASIC19.37■□□□□ 0.69
AP1S2P56377 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC19.37■□□□□ 0.69
AP1S2P56377 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms