Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC18.08■□□□□ 0.48
SUMO3P55854 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SUMO3P55854 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
SUMO3P55854 SOX15-203ENST00000570788 1093 ntBASIC18.08■□□□□ 0.48
SUMO3P55854 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC18.08■□□□□ 0.48
SUMO3P55854 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SUMO3P55854 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
SUMO3P55854 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SUMO3P55854 TMEM179-206ENST00000616017 1645 ntBASIC18.08■□□□□ 0.48
SUMO3P55854 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SUMO3P55854 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC18.08■□□□□ 0.48
SUMO3P55854 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SUMO3P55854 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
SUMO3P55854 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SUMO3P55854 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
SUMO3P55854 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SUMO3P55854 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC18.07■□□□□ 0.48
SUMO3P55854 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
SUMO3P55854 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC18.07■□□□□ 0.48
SUMO3P55854 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SUMO3P55854 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SUMO3P55854 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SUMO3P55854 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
SUMO3P55854 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC18.07■□□□□ 0.48
SUMO3P55854 UNC93B4-201ENST00000505679 747 ntBASIC18.07■□□□□ 0.48
SUMO3P55854 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC18.07■□□□□ 0.48
SUMO3P55854 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SUMO3P55854 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC18.07■□□□□ 0.48
SUMO3P55854 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC18.07■□□□□ 0.48
SUMO3P55854 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SUMO3P55854 AC009237.14-201ENST00000609975 1594 ntBASIC18.07■□□□□ 0.48
SUMO3P55854 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SUMO3P55854 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC18.07■□□□□ 0.48
SUMO3P55854 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
SUMO3P55854 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SUMO3P55854 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
SUMO3P55854 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
SUMO3P55854 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SUMO3P55854 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SUMO3P55854 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SUMO3P55854 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC18.06■□□□□ 0.48
SUMO3P55854 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC18.06■□□□□ 0.48
SUMO3P55854 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SUMO3P55854 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SUMO3P55854 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SUMO3P55854 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC18.06■□□□□ 0.48
SUMO3P55854 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
SUMO3P55854 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC18.06■□□□□ 0.48
SUMO3P55854 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
SUMO3P55854 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
SUMO3P55854 AC008687.6-201ENST00000596318 630 ntBASIC18.06■□□□□ 0.48
SUMO3P55854 AL121906.2-201ENST00000621597 723 ntBASIC18.06■□□□□ 0.48
SUMO3P55854 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SUMO3P55854 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SUMO3P55854 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SUMO3P55854 AL691432.2-201ENST00000607222 2038 ntBASIC18.06■□□□□ 0.48
SUMO3P55854 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC18.06■□□□□ 0.48
SUMO3P55854 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SUMO3P55854 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC18.05■□□□□ 0.48
SUMO3P55854 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SUMO3P55854 AC116351.2-201ENST00000606540 1585 ntBASIC18.05■□□□□ 0.48
SUMO3P55854 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
SUMO3P55854 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
SUMO3P55854 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
SUMO3P55854 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
SUMO3P55854 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
SUMO3P55854 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SUMO3P55854 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
SUMO3P55854 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC18.05■□□□□ 0.48
SUMO3P55854 RPS2P52-201ENST00000469610 820 ntBASIC18.05■□□□□ 0.48
SUMO3P55854 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC18.05■□□□□ 0.48
SUMO3P55854 AP003097.1-201ENST00000530657 1135 ntBASIC18.05■□□□□ 0.48
SUMO3P55854 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC18.05■□□□□ 0.48
SUMO3P55854 AC120498.8-201ENST00000614275 531 ntBASIC18.05■□□□□ 0.48
SUMO3P55854 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SUMO3P55854 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC18.05■□□□□ 0.48
SUMO3P55854 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SUMO3P55854 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SUMO3P55854 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SUMO3P55854 AL391422.3-201ENST00000603791 2761 ntBASIC18.05■□□□□ 0.48
SUMO3P55854 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC18.05■□□□□ 0.48
SUMO3P55854 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SUMO3P55854 ADM-207ENST00000530439 1839 ntTSL 2 BASIC18.05■□□□□ 0.48
SUMO3P55854 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SUMO3P55854 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC18.04■□□□□ 0.48
SUMO3P55854 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC18.04■□□□□ 0.48
SUMO3P55854 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SUMO3P55854 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SUMO3P55854 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC18.04■□□□□ 0.48
SUMO3P55854 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SUMO3P55854 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SUMO3P55854 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC18.04■□□□□ 0.48
SUMO3P55854 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC18.04■□□□□ 0.48
SUMO3P55854 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC18.04■□□□□ 0.48
SUMO3P55854 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC18.04■□□□□ 0.48
SUMO3P55854 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC18.04■□□□□ 0.48
SUMO3P55854 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC18.04■□□□□ 0.48
SUMO3P55854 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC18.04■□□□□ 0.48
SUMO3P55854 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
SUMO3P55854 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms