Protein–RNA interactions for Protein: P54253

ATXN1, Ataxin-1, humanhuman

Known RBP Predictions only

Length 815 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN1P54253 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
ATXN1P54253 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
ATXN1P54253 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC20.94■□□□□ 0.94
ATXN1P54253 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC20.94■□□□□ 0.94
ATXN1P54253 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
ATXN1P54253 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
ATXN1P54253 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
ATXN1P54253 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ATXN1P54253 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
ATXN1P54253 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
ATXN1P54253 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ATXN1P54253 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
ATXN1P54253 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC20.93■□□□□ 0.94
ATXN1P54253 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ATXN1P54253 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
ATXN1P54253 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
ATXN1P54253 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ATXN1P54253 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ATXN1P54253 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ATXN1P54253 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC20.93■□□□□ 0.94
ATXN1P54253 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC20.93■□□□□ 0.94
ATXN1P54253 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
ATXN1P54253 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
ATXN1P54253 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC20.93■□□□□ 0.94
ATXN1P54253 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC20.93■□□□□ 0.94
ATXN1P54253 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC20.93■□□□□ 0.94
ATXN1P54253 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC20.93■□□□□ 0.94
ATXN1P54253 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
ATXN1P54253 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ATXN1P54253 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
ATXN1P54253 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
ATXN1P54253 MOK-233ENST00000524214 1539 ntTSL 2 BASIC20.93■□□□□ 0.94
ATXN1P54253 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
ATXN1P54253 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC20.93■□□□□ 0.94
ATXN1P54253 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC20.92■□□□□ 0.94
ATXN1P54253 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ATXN1P54253 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ATXN1P54253 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
ATXN1P54253 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ATXN1P54253 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC20.92■□□□□ 0.94
ATXN1P54253 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
ATXN1P54253 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC20.92■□□□□ 0.94
ATXN1P54253 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC20.92■□□□□ 0.94
ATXN1P54253 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ATXN1P54253 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
ATXN1P54253 GATS-209ENST00000454084 1030 ntTSL 3 BASIC20.92■□□□□ 0.94
ATXN1P54253 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC20.92■□□□□ 0.94
ATXN1P54253 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC20.92■□□□□ 0.94
ATXN1P54253 RPPH1-201ENST00000516869 333 ntBASIC20.92■□□□□ 0.94
ATXN1P54253 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
ATXN1P54253 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC20.92■□□□□ 0.94
ATXN1P54253 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
ATXN1P54253 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC20.92■□□□□ 0.94
ATXN1P54253 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC20.92■□□□□ 0.94
ATXN1P54253 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC20.92■□□□□ 0.94
ATXN1P54253 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
ATXN1P54253 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ATXN1P54253 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ATXN1P54253 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
ATXN1P54253 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
ATXN1P54253 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ATXN1P54253 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ATXN1P54253 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC20.92■□□□□ 0.94
ATXN1P54253 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
ATXN1P54253 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
ATXN1P54253 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
ATXN1P54253 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
ATXN1P54253 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
ATXN1P54253 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
ATXN1P54253 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
ATXN1P54253 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
ATXN1P54253 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC20.91■□□□□ 0.94
ATXN1P54253 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC20.91■□□□□ 0.94
ATXN1P54253 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC20.91■□□□□ 0.94
ATXN1P54253 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC20.91■□□□□ 0.94
ATXN1P54253 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
ATXN1P54253 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
ATXN1P54253 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC20.91■□□□□ 0.94
ATXN1P54253 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
ATXN1P54253 RNF121-214ENST00000533380 870 ntTSL 3 BASIC20.91■□□□□ 0.94
ATXN1P54253 BX088651.1-201ENST00000540551 451 ntBASIC20.91■□□□□ 0.94
ATXN1P54253 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
ATXN1P54253 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC20.91■□□□□ 0.94
ATXN1P54253 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
ATXN1P54253 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
ATXN1P54253 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC20.9■□□□□ 0.94
ATXN1P54253 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ATXN1P54253 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ATXN1P54253 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC20.9■□□□□ 0.94
ATXN1P54253 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ATXN1P54253 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ATXN1P54253 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ATXN1P54253 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC20.9■□□□□ 0.94
ATXN1P54253 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC20.9■□□□□ 0.94
ATXN1P54253 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ATXN1P54253 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC20.9■□□□□ 0.94
ATXN1P54253 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ATXN1P54253 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ATXN1P54253 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC20.9■□□□□ 0.94
ATXN1P54253 ABHD17AP6-201ENST00000458502 1044 ntBASIC20.9■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 17 ms