Protein–RNA interactions for Protein: P53900

GIM3, Prefoldin subunit 4, yeastyeast

Predictions only

Length 129 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
GIM3P53900 YOR008C-AYOR008C-A 225 nt-2.21□□□□□ -2.76
GIM3P53900 SKI7YOR076C 2244 nt-2.23□□□□□ -2.77
GIM3P53900 YFL019CYFL019C 354 nt-2.25□□□□□ -2.77
GIM3P53900 YEL014CYEL014C 306 nt-2.29□□□□□ -2.78
GIM3P53900 YPL038W-AYPL038W-A 192 nt-2.29□□□□□ -2.78
GIM3P53900 YPR197CYPR197C 564 nt-2.3□□□□□ -2.78
GIM3P53900 tD(GUC)QtD(GUC)Q 75 nt-2.31□□□□□ -2.78
GIM3P53900 tF(GAA)QtF(GAA)Q 75 nt-2.34□□□□□ -2.78
GIM3P53900 YER181CYER181C 324 nt-2.34□□□□□ -2.78
GIM3P53900 YLR286W-AYLR286W-A 135 nt-2.35□□□□□ -2.79
GIM3P53900 YDR413CYDR413C 576 nt-2.36□□□□□ -2.79
GIM3P53900 RPL39YJL189W 156 nt-2.39□□□□□ -2.79
GIM3P53900 YML054C-AYML054C-A 159 nt-2.42□□□□□ -2.8
GIM3P53900 YOR329W-AYOR329W-A 210 nt-2.42□□□□□ -2.8
GIM3P53900 YDR157WYDR157W 402 nt-2.45□□□□□ -2.8
GIM3P53900 YBR131C-AYBR131C-A 90 nt-2.46□□□□□ -2.8
GIM3P53900 YDL159C-BYDL159C-B 177 nt-2.47□□□□□ -2.8
GIM3P53900 CDC65tQ(CUG)M 72 nt-2.5□□□□□ -2.81
GIM3P53900 YBR178WYBR178W 375 nt-2.5□□□□□ -2.81
GIM3P53900 Q0017Q0017 162 nt-2.5□□□□□ -2.81
GIM3P53900 YNL205CYNL205C 423 nt-2.51□□□□□ -2.81
GIM3P53900 YGR240C-AYGR240C-A 201 nt-2.52□□□□□ -2.81
GIM3P53900 YNL277W-AYNL277W-A 189 nt-2.55□□□□□ -2.82
GIM3P53900 YNL097C-BYNL097C-B 123 nt-2.58□□□□□ -2.82
GIM3P53900 YDL240C-AYDL240C-A 138 nt-2.59□□□□□ -2.82
GIM3P53900 YLR222C-AYLR222C-A 231 nt-2.62□□□□□ -2.83
GIM3P53900 snR55snR55 98 nt-2.64□□□□□ -2.83
GIM3P53900 snR77snR77 88 nt-2.65□□□□□ -2.83
GIM3P53900 YKL118WYKL118W 312 nt-2.65□□□□□ -2.83
GIM3P53900 snR48snR48 113 nt-2.66□□□□□ -2.84
GIM3P53900 YDR118W-AYDR118W-A 117 nt-2.7□□□□□ -2.84
GIM3P53900 YBR126W-BYBR126W-B 144 nt-2.73□□□□□ -2.85
GIM3P53900 GIM4YEL003W 336 nt-2.75□□□□□ -2.85
GIM3P53900 YLR299C-AYLR299C-A 93 nt-2.77□□□□□ -2.85
GIM3P53900 YOR102WYOR102W 351 nt-2.77□□□□□ -2.85
GIM3P53900 snR81snR81 201 nt-2.79□□□□□ -2.86
GIM3P53900 YMR315W-AYMR315W-A 108 nt-2.84□□□□□ -2.86
GIM3P53900 YGL188C-AYGL188C-A 141 nt-2.85□□□□□ -2.87
GIM3P53900 tL(UAA)QtL(UAA)Q 85 nt-2.87□□□□□ -2.87
GIM3P53900 YOL155W-AYOL155W-A 135 nt-2.89□□□□□ -2.87
GIM3P53900 YBR196C-AYBR196C-A 150 nt-2.89□□□□□ -2.87
GIM3P53900 YPR012WYPR012W 255 nt-2.91□□□□□ -2.88
GIM3P53900 YOR302WYOR302W 78 nt-2.94□□□□□ -2.88
GIM3P53900 YOR376W-AYOR376W-A 156 nt-2.95□□□□□ -2.88
GIM3P53900 VAR1Q0140 1197 nt-2.97□□□□□ -2.88
GIM3P53900 YLR342W-AYLR342W-A 174 nt-3.07□□□□□ -2.9
GIM3P53900 YPL152W-AYPL152W-A 99 nt-3.08□□□□□ -2.9
GIM3P53900 YHL015W-AYHL015W-A 84 nt-3.11□□□□□ -2.91
GIM3P53900 YHR180C-BYHR180C-B 105 nt-3.13□□□□□ -2.91
GIM3P53900 snR52snR52 92 nt-3.13□□□□□ -2.91
GIM3P53900 snR65snR65 100 nt-3.14□□□□□ -2.91
GIM3P53900 YOR316C-AYOR316C-A 210 nt-3.17□□□□□ -2.92
GIM3P53900 YOR309CYOR309C 381 nt-3.26□□□□□ -2.93
GIM3P53900 YNL198CYNL198C 303 nt-3.27□□□□□ -2.93
GIM3P53900 YKL106C-AYKL106C-A 120 nt-3.31□□□□□ -2.94
GIM3P53900 YJL150WYJL150W 303 nt-3.32□□□□□ -2.94
GIM3P53900 YDR543CYDR543C 300 nt-3.43□□□□□ -2.96
GIM3P53900 snR56snR56 88 nt-3.45□□□□□ -2.96
GIM3P53900 SOM1YEL059C-A 225 nt-3.52□□□□□ -2.97
GIM3P53900 YBR109W-AYBR109W-A 225 nt-3.52□□□□□ -2.97
GIM3P53900 snR80snR80 171 nt-3.58□□□□□ -2.98
GIM3P53900 YBR296C-AYBR296C-A 120 nt-3.59□□□□□ -2.98
GIM3P53900 YCR095W-AYCR095W-A 159 nt-3.66□□□□□ -3
GIM3P53900 RPL41AYDL184C 78 nt-3.67□□□□□ -3
GIM3P53900 YOL083C-AYOL083C-A 141 nt-3.68□□□□□ -3
GIM3P53900 YDR524W-CYDR524W-C 90 nt-3.69□□□□□ -3
GIM3P53900 YOR231C-AYOR231C-A 201 nt-3.69□□□□□ -3
GIM3P53900 YDR406W-AYDR406W-A 246 nt-3.75□□□□□ -3.01
GIM3P53900 YHR175W-AYHR175W-A 150 nt-3.79□□□□□ -3.02
GIM3P53900 YBL053WYBL053W 375 nt-3.83□□□□□ -3.02
GIM3P53900 snR38snR38 95 nt-3.83□□□□□ -3.02
GIM3P53900 snR6snR6 112 nt-3.87□□□□□ -3.03
GIM3P53900 Q0144Q0144 330 nt-3.88□□□□□ -3.03
GIM3P53900 tR(ACG)Q2tR(ACG)Q2 74 nt-3.96□□□□□ -3.04
GIM3P53900 YGR151CYGR151C 336 nt-3.98□□□□□ -3.05
GIM3P53900 YBL071C-BYBL071C-B 99 nt-3.99□□□□□ -3.05
GIM3P53900 Q0142Q0142 177 nt-4.02□□□□□ -3.05
GIM3P53900 YOL166W-AYOL166W-A 156 nt-4.02□□□□□ -3.05
GIM3P53900 YOL164W-AYOL164W-A 183 nt-4.06□□□□□ -3.06
GIM3P53900 YOR335W-AYOR335W-A 81 nt-4.1□□□□□ -3.07
GIM3P53900 snR73snR73 106 nt-4.14□□□□□ -3.07
GIM3P53900 RPL41BYDL133C-A 78 nt-4.17□□□□□ -3.08
GIM3P53900 YAL037C-AYAL037C-A 93 nt-4.2□□□□□ -3.08
GIM3P53900 snR47snR47 99 nt-4.23□□□□□ -3.09
GIM3P53900 YBL100W-CYBL100W-C 120 nt-4.29□□□□□ -3.1
GIM3P53900 YMR046W-AYMR046W-A 129 nt-4.35□□□□□ -3.11
GIM3P53900 tV(UAC)QtV(UAC)Q 76 nt-4.47□□□□□ -3.13
GIM3P53900 YCL001W-BYCL001W-B 255 nt-4.47□□□□□ -3.13
GIM3P53900 YDL114W-AYDL114W-A 114 nt-4.5□□□□□ -3.13
GIM3P53900 YKL225WYKL225W 348 nt-4.55□□□□□ -3.14
GIM3P53900 YDR524C-AYDR524C-A 120 nt-4.56□□□□□ -3.14
GIM3P53900 snR85snR85 171 nt-4.59□□□□□ -3.14
GIM3P53900 SPG3YDR504C 384 nt-4.67□□□□□ -3.16
GIM3P53900 tS(GCU)Q1tS(GCU)Q1 86 nt-4.7□□□□□ -3.16
GIM3P53900 YJR162CYJR162C 351 nt-4.74□□□□□ -3.17
GIM3P53900 YNL337WYNL337W 255 nt-4.74□□□□□ -3.17
GIM3P53900 tM(CAU)Q1tM(CAU)Q1 76 nt-4.86□□□□□ -3.19
GIM3P53900 YLR466C-BYLR466C-B 117 nt-4.92□□□□□ -3.2
GIM3P53900 YNL338WYNL338W 159 nt-5.12□□□□□ -3.23
GIM3P53900 YGR122C-AYGR122C-A 129 nt-5.13□□□□□ -3.23
Retrieved 100 of 7,029 protein–RNA pairs in 14.3 ms