Protein–RNA interactions for Protein: P53866

SQS1, Protein SQS1, yeastyeast

Known RBP Predictions only

Length 767 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SQS1P53866 NNF2YGR089W 2811 nt0.84□□□□□ -2.27
SQS1P53866 AI1Q0050 2505 nt0.84□□□□□ -2.27
SQS1P53866 YGR146C-AYGR146C-A 162 nt0.83□□□□□ -2.28
SQS1P53866 YLL006W-AYLL006W-A 177 nt0.83□□□□□ -2.28
SQS1P53866 YCL001W-BYCL001W-B 255 nt0.81□□□□□ -2.28
SQS1P53866 YCR095W-AYCR095W-A 159 nt0.8□□□□□ -2.28
SQS1P53866 NIP1YMR309C 2439 nt0.79□□□□□ -2.28
SQS1P53866 YIL071W-AYIL071W-A 477 nt0.78□□□□□ -2.28
SQS1P53866 IQG1YPL242C 4488 nt0.77□□□□□ -2.29
SQS1P53866 YOR192C-BYOR192C-B 5313 nt0.76□□□□□ -2.29
SQS1P53866 YER078W-AYER078W-A 165 nt0.76□□□□□ -2.29
SQS1P53866 SOM1YEL059C-A 225 nt0.75□□□□□ -2.29
SQS1P53866 FMP27YLR454W 7887 nt0.74□□□□□ -2.29
SQS1P53866 PET111YMR257C 2403 nt0.74□□□□□ -2.29
SQS1P53866 RPS26AYGL189C 360 nt0.74□□□□□ -2.29
SQS1P53866 YDR371C-AYDR371C-A 105 nt0.72□□□□□ -2.29
SQS1P53866 YNL205CYNL205C 423 nt0.71□□□□□ -2.3
SQS1P53866 YPR159C-AYPR159C-A 102 nt0.69□□□□□ -2.3
SQS1P53866 MLP1YKR095W 5628 nt0.69□□□□□ -2.3
SQS1P53866 YMR272W-AYMR272W-A 114 nt0.68□□□□□ -2.3
SQS1P53866 YBR099CYBR099C 384 nt0.66□□□□□ -2.3
SQS1P53866 RCO1YMR075W 2055 nt0.65□□□□□ -2.31
SQS1P53866 YBL100W-BYBL100W-B 5313 nt0.64□□□□□ -2.31
SQS1P53866 ORC3YLL004W 1851 nt0.64□□□□□ -2.31
SQS1P53866 CSE1YGL238W 2883 nt0.63□□□□□ -2.31
SQS1P53866 THO2YNL139C 4794 nt0.62□□□□□ -2.31
SQS1P53866 PMP2YEL017C-A 132 nt0.6□□□□□ -2.31
SQS1P53866 SBH1YER087C-B 249 nt0.6□□□□□ -2.31
SQS1P53866 Q0143Q0143 153 nt0.6□□□□□ -2.31
SQS1P53866 YNL266WYNL266W 420 nt0.59□□□□□ -2.31
SQS1P53866 UTP10YJL109C 5310 nt0.59□□□□□ -2.32
SQS1P53866 YNL054W-BYNL054W-B 5250 nt0.58□□□□□ -2.32
SQS1P53866 SEC10YLR166C 2616 nt0.56□□□□□ -2.32
SQS1P53866 EST1YLR233C 2100 nt0.55□□□□□ -2.32
SQS1P53866 snR69snR69 101 nt0.54□□□□□ -2.32
SQS1P53866 YJL077W-AYJL077W-A 87 nt0.53□□□□□ -2.32
SQS1P53866 MLP2YIL149C 5040 nt0.53□□□□□ -2.33
SQS1P53866 ESP1YGR098C 4893 nt0.51□□□□□ -2.33
SQS1P53866 YBR178WYBR178W 375 nt0.51□□□□□ -2.33
SQS1P53866 tD(GUC)QtD(GUC)Q 75 nt0.48□□□□□ -2.33
SQS1P53866 snR85snR85 171 nt0.45□□□□□ -2.34
SQS1P53866 YOR186C-AYOR186C-A 210 nt0.45□□□□□ -2.34
SQS1P53866 RDS3YPR094W 324 nt0.45□□□□□ -2.34
SQS1P53866 YBR196C-AYBR196C-A 150 nt0.45□□□□□ -2.34
SQS1P53866 YNL103W-AYNL103W-A 90 nt0.43□□□□□ -2.34
SQS1P53866 snR61snR61 90 nt0.41□□□□□ -2.34
SQS1P53866 YLR286W-AYLR286W-A 135 nt0.37□□□□□ -2.35
SQS1P53866 SOV1YMR066W 2697 nt0.36□□□□□ -2.35
SQS1P53866 tQ(UUG)QtQ(UUG)Q 76 nt0.35□□□□□ -2.35
SQS1P53866 YDL159C-BYDL159C-B 177 nt0.33□□□□□ -2.36
SQS1P53866 YAL037C-AYAL037C-A 93 nt0.32□□□□□ -2.36
SQS1P53866 YER090C-AYER090C-A 90 nt0.31□□□□□ -2.36
SQS1P53866 YOL013W-AYOL013W-A 192 nt0.31□□□□□ -2.36
SQS1P53866 TFB5YDR079C-A 219 nt0.3□□□□□ -2.36
SQS1P53866 snR81snR81 201 nt0.29□□□□□ -2.36
SQS1P53866 snR45snR45 172 nt0.29□□□□□ -2.36
SQS1P53866 YGL041C-BYGL041C-B 183 nt0.28□□□□□ -2.36
SQS1P53866 YLR299C-AYLR299C-A 93 nt0.28□□□□□ -2.36
SQS1P53866 YBL071C-BYBL071C-B 99 nt0.24□□□□□ -2.37
SQS1P53866 YOL083C-AYOL083C-A 141 nt0.23□□□□□ -2.37
SQS1P53866 snR50snR50 90 nt0.21□□□□□ -2.38
SQS1P53866 YMR326CYMR326C 309 nt0.2□□□□□ -2.38
SQS1P53866 YHR217CYHR217C 462 nt0.14□□□□□ -2.39
SQS1P53866 YBL109WYBL109W 336 nt0.14□□□□□ -2.39
SQS1P53866 YML100W-AYML100W-A 174 nt0.13□□□□□ -2.39
SQS1P53866 YOL164W-AYOL164W-A 183 nt0.13□□□□□ -2.39
SQS1P53866 snR128snR128 126 nt0.11□□□□□ -2.39
SQS1P53866 YML054C-AYML054C-A 159 nt0.08□□□□□ -2.4
SQS1P53866 snR67snR67 82 nt0.07□□□□□ -2.4
SQS1P53866 YDR524C-AYDR524C-A 120 nt0.06□□□□□ -2.4
SQS1P53866 tS(GCU)Q1tS(GCU)Q1 86 nt0.05□□□□□ -2.4
SQS1P53866 YHR180C-BYHR180C-B 105 nt0.03□□□□□ -2.4
SQS1P53866 YBL100W-CYBL100W-C 120 nt0.03□□□□□ -2.4
SQS1P53866 YGR240C-AYGR240C-A 201 nt0.01□□□□□ -2.41
SQS1P53866 snR62snR62 100 nt-0.03□□□□□ -2.41
SQS1P53866 snR47snR47 99 nt-0.04□□□□□ -2.42
SQS1P53866 YBR109W-AYBR109W-A 225 nt-0.06□□□□□ -2.42
SQS1P53866 SKI7YOR076C 2244 nt-0.1□□□□□ -2.43
SQS1P53866 YBR296C-AYBR296C-A 120 nt-0.12□□□□□ -2.43
SQS1P53866 YJL113WYJL113W 4647 nt-0.13□□□□□ -2.43
SQS1P53866 RPL41AYDL184C 78 nt-0.13□□□□□ -2.43
SQS1P53866 YDR034C-AYDR034C-A 177 nt-0.16□□□□□ -2.44
SQS1P53866 snR38snR38 95 nt-0.16□□□□□ -2.44
SQS1P53866 SBH2YER019C-A 267 nt-0.19□□□□□ -2.44
SQS1P53866 YDL247W-AYDL247W-A 75 nt-0.21□□□□□ -2.44
SQS1P53866 tA(UGC)QtA(UGC)Q 76 nt-0.21□□□□□ -2.44
SQS1P53866 PAU9YBL108C-A 129 nt-0.21□□□□□ -2.44
SQS1P53866 YLL066W-BYLL066W-B 171 nt-0.26□□□□□ -2.45
SQS1P53866 YKL225WYKL225W 348 nt-0.28□□□□□ -2.45
SQS1P53866 YHL009W-BYHL009W-B 5409 nt-0.39□□□□□ -2.47
SQS1P53866 YKL106C-AYKL106C-A 120 nt-0.43□□□□□ -2.48
SQS1P53866 URB1YKL014C 5295 nt-0.43□□□□□ -2.48
SQS1P53866 snR64snR64 101 nt-0.45□□□□□ -2.48
SQS1P53866 YNR077CYNR077C 255 nt-0.45□□□□□ -2.48
SQS1P53866 YOR376W-AYOR376W-A 156 nt-0.45□□□□□ -2.48
SQS1P53866 snR33snR33 183 nt-0.47□□□□□ -2.48
SQS1P53866 snR161snR161 161 nt-0.53□□□□□ -2.49
SQS1P53866 tT(UGU)G1tT(UGU)G1 72 nt-0.56□□□□□ -2.5
SQS1P53866 tT(UGU)G2tT(UGU)G2 72 nt-0.56□□□□□ -2.5
SQS1P53866 tT(UGU)PtT(UGU)P 72 nt-0.56□□□□□ -2.5
Retrieved 100 of 7,029 protein–RNA pairs in 13.2 ms