Protein–RNA interactions for Protein: P53859

CSL4, Exosome complex component CSL4, yeastyeast

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CSL4P53859 IQG1YPL242C 4488 nt0.57□□□□□ -2.32
CSL4P53859 MLP1YKR095W 5628 nt0.57□□□□□ -2.32
CSL4P53859 YDR210WYDR210W 228 nt0.56□□□□□ -2.32
CSL4P53859 FMP27YLR454W 7887 nt0.55□□□□□ -2.32
CSL4P53859 ORC3YLL004W 1851 nt0.54□□□□□ -2.32
CSL4P53859 tL(UAA)QtL(UAA)Q 85 nt0.53□□□□□ -2.32
CSL4P53859 YBL053WYBL053W 375 nt0.53□□□□□ -2.32
CSL4P53859 snR39BsnR39B 96 nt0.52□□□□□ -2.33
CSL4P53859 YDL007C-AYDL007C-A 258 nt0.51□□□□□ -2.33
CSL4P53859 YOR225WYOR225W 330 nt0.5□□□□□ -2.33
CSL4P53859 YNL067W-BYNL067W-B 141 nt0.47□□□□□ -2.33
CSL4P53859 RPM2YML091C 3609 nt0.46□□□□□ -2.34
CSL4P53859 MYO1YHR023W 5787 nt0.46□□□□□ -2.34
CSL4P53859 RCO1YMR075W 2055 nt0.44□□□□□ -2.34
CSL4P53859 YGR146C-AYGR146C-A 162 nt0.43□□□□□ -2.34
CSL4P53859 YLR294CYLR294C 330 nt0.42□□□□□ -2.34
CSL4P53859 YOR186C-AYOR186C-A 210 nt0.39□□□□□ -2.35
CSL4P53859 YBL100W-BYBL100W-B 5313 nt0.38□□□□□ -2.35
CSL4P53859 YBR099CYBR099C 384 nt0.37□□□□□ -2.35
CSL4P53859 YNL205CYNL205C 423 nt0.31□□□□□ -2.36
CSL4P53859 EST1YLR233C 2100 nt0.28□□□□□ -2.37
CSL4P53859 SOM1YEL059C-A 225 nt0.27□□□□□ -2.37
CSL4P53859 YJL077W-AYJL077W-A 87 nt0.27□□□□□ -2.37
CSL4P53859 YOL013W-AYOL013W-A 192 nt0.27□□□□□ -2.37
CSL4P53859 MLP2YIL149C 5040 nt0.27□□□□□ -2.37
CSL4P53859 PMP2YEL017C-A 132 nt0.26□□□□□ -2.37
CSL4P53859 snR69snR69 101 nt0.24□□□□□ -2.37
CSL4P53859 YGR164WYGR164W 336 nt0.24□□□□□ -2.37
CSL4P53859 YCR095W-AYCR095W-A 159 nt0.23□□□□□ -2.37
CSL4P53859 YNL054W-BYNL054W-B 5250 nt0.2□□□□□ -2.38
CSL4P53859 tQ(UUG)QtQ(UUG)Q 76 nt0.2□□□□□ -2.38
CSL4P53859 snR45snR45 172 nt0.2□□□□□ -2.38
CSL4P53859 ESP1YGR098C 4893 nt0.2□□□□□ -2.38
CSL4P53859 YCL001W-BYCL001W-B 255 nt0.19□□□□□ -2.38
CSL4P53859 SEC10YLR166C 2616 nt0.18□□□□□ -2.38
CSL4P53859 YNL266WYNL266W 420 nt0.16□□□□□ -2.38
CSL4P53859 RDS3YPR094W 324 nt0.16□□□□□ -2.38
CSL4P53859 YPL060C-AYPL060C-A 3315 nt0.15□□□□□ -2.39
CSL4P53859 tD(GUC)QtD(GUC)Q 75 nt0.14□□□□□ -2.39
CSL4P53859 SOV1YMR066W 2697 nt0.14□□□□□ -2.39
CSL4P53859 YIL071W-AYIL071W-A 477 nt0.13□□□□□ -2.39
CSL4P53859 YBR178WYBR178W 375 nt0.13□□□□□ -2.39
CSL4P53859 snR128snR128 126 nt0.11□□□□□ -2.39
CSL4P53859 YBR196C-AYBR196C-A 150 nt0.08□□□□□ -2.4
CSL4P53859 YNL170WYNL170W 396 nt0.07□□□□□ -2.4
CSL4P53859 TFB5YDR079C-A 219 nt0.04□□□□□ -2.4
CSL4P53859 YLR286W-AYLR286W-A 135 nt0.04□□□□□ -2.4
CSL4P53859 YDL159C-BYDL159C-B 177 nt0.03□□□□□ -2.4
CSL4P53859 ATP8Q0080 147 nt0.02□□□□□ -2.41
CSL4P53859 YER090C-AYER090C-A 90 nt0□□□□□ -2.41
CSL4P53859 snR50snR50 90 nt-0.01□□□□□ -2.41
CSL4P53859 YLR299C-AYLR299C-A 93 nt-0.05□□□□□ -2.42
CSL4P53859 Q0092Q0092 141 nt-0.08□□□□□ -2.42
CSL4P53859 YML100W-AYML100W-A 174 nt-0.11□□□□□ -2.43
CSL4P53859 snR67snR67 82 nt-0.18□□□□□ -2.44
CSL4P53859 SBH2YER019C-A 267 nt-0.21□□□□□ -2.44
CSL4P53859 PAU9YBL108C-A 129 nt-0.22□□□□□ -2.44
CSL4P53859 YOL083C-AYOL083C-A 141 nt-0.23□□□□□ -2.45
CSL4P53859 YML054C-AYML054C-A 159 nt-0.27□□□□□ -2.45
CSL4P53859 YJL113WYJL113W 4647 nt-0.29□□□□□ -2.46
CSL4P53859 YHR180C-BYHR180C-B 105 nt-0.29□□□□□ -2.46
CSL4P53859 YAL037C-AYAL037C-A 93 nt-0.29□□□□□ -2.46
CSL4P53859 YNL103W-AYNL103W-A 90 nt-0.29□□□□□ -2.46
CSL4P53859 YNR077CYNR077C 255 nt-0.29□□□□□ -2.46
CSL4P53859 YBL071C-BYBL071C-B 99 nt-0.32□□□□□ -2.46
CSL4P53859 snR61snR61 90 nt-0.34□□□□□ -2.46
CSL4P53859 snR81snR81 201 nt-0.34□□□□□ -2.46
CSL4P53859 tA(UGC)QtA(UGC)Q 76 nt-0.35□□□□□ -2.47
CSL4P53859 YGL041C-BYGL041C-B 183 nt-0.36□□□□□ -2.47
CSL4P53859 YOL164W-AYOL164W-A 183 nt-0.39□□□□□ -2.47
CSL4P53859 YBL100W-CYBL100W-C 120 nt-0.41□□□□□ -2.48
CSL4P53859 SKI7YOR076C 2244 nt-0.42□□□□□ -2.48
CSL4P53859 Q0143Q0143 153 nt-0.44□□□□□ -2.48
CSL4P53859 snR47snR47 99 nt-0.5□□□□□ -2.49
CSL4P53859 RPL41AYDL184C 78 nt-0.51□□□□□ -2.49
CSL4P53859 YGR240C-AYGR240C-A 201 nt-0.51□□□□□ -2.49
CSL4P53859 YHL009W-BYHL009W-B 5409 nt-0.52□□□□□ -2.49
CSL4P53859 YBR109W-AYBR109W-A 225 nt-0.54□□□□□ -2.5
CSL4P53859 YBR296C-AYBR296C-A 120 nt-0.54□□□□□ -2.5
CSL4P53859 URB1YKL014C 5295 nt-0.56□□□□□ -2.5
CSL4P53859 snR85snR85 171 nt-0.61□□□□□ -2.51
CSL4P53859 snR161snR161 161 nt-0.66□□□□□ -2.52
CSL4P53859 tT(UGU)G1tT(UGU)G1 72 nt-0.67□□□□□ -2.52
CSL4P53859 tT(UGU)G2tT(UGU)G2 72 nt-0.67□□□□□ -2.52
CSL4P53859 tT(UGU)PtT(UGU)P 72 nt-0.67□□□□□ -2.52
CSL4P53859 YMR326CYMR326C 309 nt-0.67□□□□□ -2.52
CSL4P53859 tS(GCU)Q1tS(GCU)Q1 86 nt-0.69□□□□□ -2.52
CSL4P53859 snR33snR33 183 nt-0.69□□□□□ -2.52
CSL4P53859 snR38snR38 95 nt-0.7□□□□□ -2.52
CSL4P53859 snR62snR62 100 nt-0.72□□□□□ -2.52
CSL4P53859 YDR034C-AYDR034C-A 177 nt-0.73□□□□□ -2.53
CSL4P53859 YKL106C-AYKL106C-A 120 nt-0.74□□□□□ -2.53
CSL4P53859 YHR217CYHR217C 462 nt-0.77□□□□□ -2.53
CSL4P53859 YOR376W-AYOR376W-A 156 nt-0.79□□□□□ -2.54
CSL4P53859 YBR223W-AYBR223W-A 120 nt-0.79□□□□□ -2.54
CSL4P53859 YKL225WYKL225W 348 nt-0.81□□□□□ -2.54
CSL4P53859 YBL109WYBL109W 336 nt-0.87□□□□□ -2.55
CSL4P53859 YOR316C-AYOR316C-A 210 nt-0.91□□□□□ -2.56
CSL4P53859 tP(UGG)QtP(UGG)Q 72 nt-0.96□□□□□ -2.56
CSL4P53859 snR77snR77 88 nt-0.97□□□□□ -2.56
Retrieved 100 of 7,029 protein–RNA pairs in 92.5 ms