Protein–RNA interactions for Protein: P53617

NRD1, Protein NRD1, yeastyeast

Known RBP RIP-Chip data

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
NRD1P53617 YLR399W-AYLR399W-A 105 nt1.57□□□□□ -2.16
NRD1P53617 MON2YNL297C 4911 nt1.56□□□□□ -2.16
NRD1P53617 BRR2YER172C 6492 nt1.55□□□□□ -2.16
NRD1P53617 MSN5YDR335W 3675 nt1.55□□□□□ -2.16
NRD1P53617 TMA7YLR262C-A 195 nt1.54□□□□□ -2.16
NRD1P53617 SSK2YNR031C 4740 nt1.54□□□□□ -2.16
NRD1P53617 CAT8YMR280C 4302 nt1.53□□□□□ -2.16
NRD1P53617 snR67snR67 82 nt1.53□□□□□ -2.16
NRD1P53617 VPS15YBR097W 4365 nt1.53□□□□□ -2.16
NRD1P53617 FIG2YCR089W 4830 nt1.52□□□□□ -2.17
NRD1P53617 TRM732YMR259C 4263 nt1.52□□□□□ -2.17
NRD1P53617 IRA1YBR140C 9279 nt1.51□□□□□ -2.17
NRD1P53617 YLR422WYLR422W 5799 nt1.51□□□□□ -2.17
NRD1P53617 NUP192YJL039C 5052 nt1.5□□□□□ -2.17
NRD1P53617 YCS4YLR272C 3531 nt1.49□□□□□ -2.17
NRD1P53617 SOV1YMR066W 2697 nt1.48□□□□□ -2.17
NRD1P53617 CLU1YMR012W 3834 nt1.48□□□□□ -2.17
NRD1P53617 SKI3YPR189W 4299 nt1.48□□□□□ -2.17
NRD1P53617 YLL006W-AYLL006W-A 177 nt1.47□□□□□ -2.17
NRD1P53617 snR77snR77 88 nt1.46□□□□□ -2.18
NRD1P53617 APL3YBL037W 3078 nt1.45□□□□□ -2.18
NRD1P53617 PMD1YER132C 5262 nt1.43□□□□□ -2.18 RIP-Chip
NRD1P53617 CCH1YGR217W 6120 nt1.42□□□□□ -2.18
NRD1P53617 tQ(UUG)E2tQ(UUG)E2 72 nt1.42□□□□□ -2.18
NRD1P53617 YGR130CYGR130C 2451 nt1.39□□□□□ -2.19
NRD1P53617 LAA1YJL207C 6045 nt1.39□□□□□ -2.19
NRD1P53617 BST1YFL025C 3090 nt1.38□□□□□ -2.19
NRD1P53617 CDC39YCR093W 6327 nt1.37□□□□□ -2.19
NRD1P53617 CDC25YLR310C 4770 nt1.36□□□□□ -2.19
NRD1P53617 SWI4YER111C 3282 nt1.34□□□□□ -2.19
NRD1P53617 tH(GUG)E1tH(GUG)E1 72 nt1.33□□□□□ -2.2
NRD1P53617 tH(GUG)E2tH(GUG)E2 72 nt1.33□□□□□ -2.2
NRD1P53617 tH(GUG)G1tH(GUG)G1 72 nt1.33□□□□□ -2.2
NRD1P53617 tH(GUG)G2tH(GUG)G2 72 nt1.33□□□□□ -2.2
NRD1P53617 tH(GUG)HtH(GUG)H 72 nt1.33□□□□□ -2.2
NRD1P53617 tH(GUG)KtH(GUG)K 72 nt1.33□□□□□ -2.2
NRD1P53617 tH(GUG)MtH(GUG)M 72 nt1.33□□□□□ -2.2
NRD1P53617 BUD3YCL014W 4911 nt1.33□□□□□ -2.2
NRD1P53617 YOR316C-AYOR316C-A 210 nt1.32□□□□□ -2.2
NRD1P53617 NUP188YML103C 4968 nt1.32□□□□□ -2.2
NRD1P53617 VAM6YDL077C 3150 nt1.29□□□□□ -2.2
NRD1P53617 NUP145YGL092W 3954 nt1.28□□□□□ -2.2
NRD1P53617 YNL284C-BYNL284C-B 5268 nt1.28□□□□□ -2.2
NRD1P53617 YPR117WYPR117W 7470 nt1.26□□□□□ -2.21
NRD1P53617 MLP2YIL149C 5040 nt1.25□□□□□ -2.21
NRD1P53617 SBH2YER019C-A 267 nt1.25□□□□□ -2.21
NRD1P53617 tC(GCA)QtC(GCA)Q 76 nt1.22□□□□□ -2.21
NRD1P53617 YOR192C-BYOR192C-B 5313 nt1.19□□□□□ -2.22
NRD1P53617 IML1YJR138W 4755 nt1.16□□□□□ -2.22
NRD1P53617 SPT7YBR081C 3999 nt1.15□□□□□ -2.23
NRD1P53617 HKR1YDR420W 5409 nt1.15□□□□□ -2.23
NRD1P53617 tV(UAC)BtV(UAC)B 74 nt1.12□□□□□ -2.23
NRD1P53617 tV(UAC)DtV(UAC)D 74 nt1.12□□□□□ -2.23
NRD1P53617 THO2YNL139C 4794 nt1.11□□□□□ -2.23
NRD1P53617 RKR1YMR247C 4689 nt1.09□□□□□ -2.23
NRD1P53617 RPL41BYDL133C-A 78 nt1.09□□□□□ -2.23
NRD1P53617 YJR029WYJR029W 5268 nt1.08□□□□□ -2.24
NRD1P53617 YPR137C-BYPR137C-B 5268 nt1.08□□□□□ -2.24
NRD1P53617 YOL014WYOL014W 375 nt1.07□□□□□ -2.24
NRD1P53617 BEM2YER155C 6504 nt1.07□□□□□ -2.24
NRD1P53617 SCC2YDR180W 4482 nt1.05□□□□□ -2.24
NRD1P53617 YKL145W-AYKL145W-A 93 nt1.01□□□□□ -2.25
NRD1P53617 YML100W-AYML100W-A 174 nt1.01□□□□□ -2.25
NRD1P53617 YOR335W-AYOR335W-A 81 nt1□□□□□ -2.25
NRD1P53617 LTE1YAL024C 4308 nt0.98□□□□□ -2.25
NRD1P53617 YBL100W-BYBL100W-B 5313 nt0.98□□□□□ -2.25
NRD1P53617 DOP1YDR141C 5097 nt0.95□□□□□ -2.26
NRD1P53617 snR6snR6 112 nt0.93□□□□□ -2.26
NRD1P53617 PAU24YBR301W 363 nt0.93□□□□□ -2.26
NRD1P53617 snR58snR58 96 nt0.9□□□□□ -2.27
NRD1P53617 ESP1YGR098C 4893 nt0.89□□□□□ -2.27
NRD1P53617 EMT1tM(CAU)D 73 nt0.84□□□□□ -2.27
NRD1P53617 EMT5tM(CAU)J1 73 nt0.84□□□□□ -2.27
NRD1P53617 EMT3tM(CAU)J2 73 nt0.84□□□□□ -2.27
NRD1P53617 EMT4tM(CAU)M 73 nt0.84□□□□□ -2.27
NRD1P53617 EMT2tM(CAU)O2 73 nt0.84□□□□□ -2.27
NRD1P53617 snR73snR73 106 nt0.81□□□□□ -2.28
NRD1P53617 FMP27YLR454W 7887 nt0.77□□□□□ -2.29
NRD1P53617 PAU9YBL108C-A 129 nt0.75□□□□□ -2.29
NRD1P53617 IQG1YPL242C 4488 nt0.74□□□□□ -2.29
NRD1P53617 YJL113WYJL113W 4647 nt0.74□□□□□ -2.29
NRD1P53617 tT(AGU)BtT(AGU)B 73 nt0.72□□□□□ -2.29
NRD1P53617 tT(AGU)CtT(AGU)C 73 nt0.72□□□□□ -2.29
NRD1P53617 tT(AGU)DtT(AGU)D 73 nt0.72□□□□□ -2.29
NRD1P53617 tT(AGU)HtT(AGU)H 73 nt0.72□□□□□ -2.29
NRD1P53617 tT(AGU)I1tT(AGU)I1 73 nt0.72□□□□□ -2.29
NRD1P53617 tT(AGU)I2tT(AGU)I2 73 nt0.72□□□□□ -2.29
NRD1P53617 tT(AGU)JtT(AGU)J 73 nt0.72□□□□□ -2.29
NRD1P53617 tT(AGU)N1tT(AGU)N1 73 nt0.72□□□□□ -2.29
NRD1P53617 tT(AGU)N2tT(AGU)N2 73 nt0.72□□□□□ -2.29
NRD1P53617 tT(AGU)O1tT(AGU)O1 73 nt0.72□□□□□ -2.29
NRD1P53617 tT(AGU)O2tT(AGU)O2 73 nt0.72□□□□□ -2.29
NRD1P53617 tF(GAA)BtF(GAA)B 73 nt0.69□□□□□ -2.3
NRD1P53617 tF(GAA)FtF(GAA)F 73 nt0.69□□□□□ -2.3
NRD1P53617 tF(GAA)GtF(GAA)G 73 nt0.69□□□□□ -2.3
NRD1P53617 tF(GAA)H1tF(GAA)H1 73 nt0.69□□□□□ -2.3
NRD1P53617 tF(GAA)H2tF(GAA)H2 73 nt0.69□□□□□ -2.3
NRD1P53617 tF(GAA)MtF(GAA)M 73 nt0.69□□□□□ -2.3
NRD1P53617 tF(GAA)P1tF(GAA)P1 73 nt0.69□□□□□ -2.3
NRD1P53617 tF(GAA)P2tF(GAA)P2 73 nt0.69□□□□□ -2.3
Retrieved 100 of 7,029 protein–RNA pairs in 47.2 ms