Protein–RNA interactions for Protein: P53384

NUBP1, Cytosolic Fe-S cluster assembly factor NUBP1, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUBP1P53384 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
NUBP1P53384 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC19.94■□□□□ 0.78
NUBP1P53384 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
NUBP1P53384 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
NUBP1P53384 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
NUBP1P53384 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
NUBP1P53384 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
NUBP1P53384 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC19.94■□□□□ 0.78
NUBP1P53384 PRSS44-201ENST00000515154 1146 ntBASIC19.94■□□□□ 0.78
NUBP1P53384 SDHD-206ENST00000528182 754 ntTSL 3 BASIC19.94■□□□□ 0.78
NUBP1P53384 AC111152.3-201ENST00000569699 673 ntBASIC19.94■□□□□ 0.78
NUBP1P53384 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
NUBP1P53384 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
NUBP1P53384 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
NUBP1P53384 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
NUBP1P53384 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC19.93■□□□□ 0.78
NUBP1P53384 AC092338.2-201ENST00000568827 1415 ntBASIC19.93■□□□□ 0.78
NUBP1P53384 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC19.93■□□□□ 0.78
NUBP1P53384 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC19.93■□□□□ 0.78
NUBP1P53384 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC19.93■□□□□ 0.78
NUBP1P53384 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC19.93■□□□□ 0.78
NUBP1P53384 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
NUBP1P53384 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC19.93■□□□□ 0.78
NUBP1P53384 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC19.93■□□□□ 0.78
NUBP1P53384 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
NUBP1P53384 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC19.93■□□□□ 0.78
NUBP1P53384 EXOC3-AS1-202ENST00000623673 1663 ntBASIC19.93■□□□□ 0.78
NUBP1P53384 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
NUBP1P53384 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
NUBP1P53384 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
NUBP1P53384 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
NUBP1P53384 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
NUBP1P53384 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
NUBP1P53384 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
NUBP1P53384 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC19.92■□□□□ 0.78
NUBP1P53384 FDX2-206ENST00000492239 773 ntTSL 2 BASIC19.92■□□□□ 0.78
NUBP1P53384 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC19.92■□□□□ 0.78
NUBP1P53384 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC19.92■□□□□ 0.78
NUBP1P53384 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
NUBP1P53384 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC19.92■□□□□ 0.78
NUBP1P53384 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
NUBP1P53384 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
NUBP1P53384 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
NUBP1P53384 KRT8P10-201ENST00000450021 1447 ntBASIC19.92■□□□□ 0.78
NUBP1P53384 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
NUBP1P53384 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC19.91■□□□□ 0.78
NUBP1P53384 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
NUBP1P53384 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
NUBP1P53384 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
NUBP1P53384 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
NUBP1P53384 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC19.91■□□□□ 0.78
NUBP1P53384 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
NUBP1P53384 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
NUBP1P53384 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
NUBP1P53384 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
NUBP1P53384 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC19.91■□□□□ 0.78
NUBP1P53384 OR5D16-201ENST00000378396 987 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
NUBP1P53384 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
NUBP1P53384 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC19.91■□□□□ 0.78
NUBP1P53384 AL359075.1-203ENST00000462729 1002 ntBASIC19.91■□□□□ 0.78
NUBP1P53384 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC19.91■□□□□ 0.78
NUBP1P53384 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
NUBP1P53384 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC19.91■□□□□ 0.78
NUBP1P53384 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC19.91■□□□□ 0.78
NUBP1P53384 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC19.91■□□□□ 0.78
NUBP1P53384 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC19.91■□□□□ 0.78
NUBP1P53384 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC19.91■□□□□ 0.78
NUBP1P53384 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
NUBP1P53384 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
NUBP1P53384 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC19.91■□□□□ 0.78
NUBP1P53384 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
NUBP1P53384 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
NUBP1P53384 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC19.91■□□□□ 0.78
NUBP1P53384 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
NUBP1P53384 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
NUBP1P53384 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
NUBP1P53384 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
NUBP1P53384 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
NUBP1P53384 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
NUBP1P53384 AC093323.1-202ENST00000635031 2045 ntBASIC19.9■□□□□ 0.78
NUBP1P53384 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
NUBP1P53384 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
NUBP1P53384 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
NUBP1P53384 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC19.9■□□□□ 0.78
NUBP1P53384 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC19.9■□□□□ 0.78
NUBP1P53384 AP000347.1-202ENST00000435868 847 ntBASIC19.9■□□□□ 0.78
NUBP1P53384 MFAP1P1-201ENST00000442257 1255 ntBASIC19.9■□□□□ 0.78
NUBP1P53384 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC19.9■□□□□ 0.78
NUBP1P53384 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC19.9■□□□□ 0.78
NUBP1P53384 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC19.9■□□□□ 0.78
NUBP1P53384 AC012313.10-201ENST00000623509 926 ntBASIC19.9■□□□□ 0.78
NUBP1P53384 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC19.9■□□□□ 0.78
NUBP1P53384 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC19.9■□□□□ 0.78
NUBP1P53384 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC19.9■□□□□ 0.78
NUBP1P53384 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
NUBP1P53384 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
NUBP1P53384 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
NUBP1P53384 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
NUBP1P53384 AC026471.6-201ENST00000622954 1905 ntBASIC19.9■□□□□ 0.78
NUBP1P53384 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms