Protein–RNA interactions for Protein: P53227

YGR042W, Uncharacterized protein YGR042W, yeastyeast

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
YGR042WP53227 YMR315W-AYMR315W-A 108 nt-2.12□□□□□ -2.75
YGR042WP53227 YDL159C-BYDL159C-B 177 nt-2.15□□□□□ -2.75
YGR042WP53227 YGR035CYGR035C 351 nt-2.16□□□□□ -2.76
YGR042WP53227 tR(UCU)Q1tR(UCU)Q1 73 nt-2.16□□□□□ -2.76
YGR042WP53227 YBR178WYBR178W 375 nt-2.16□□□□□ -2.76
YGR042WP53227 YEL014CYEL014C 306 nt-2.17□□□□□ -2.76
YGR042WP53227 YAL063C-AYAL063C-A 291 nt-2.18□□□□□ -2.76
YGR042WP53227 YBR182C-AYBR182C-A 195 nt-2.23□□□□□ -2.77
YGR042WP53227 YOR329W-AYOR329W-A 210 nt-2.24□□□□□ -2.77
YGR042WP53227 YBR126W-BYBR126W-B 144 nt-2.24□□□□□ -2.77
YGR042WP53227 YAL016C-BYAL016C-B 186 nt-2.28□□□□□ -2.77
YGR042WP53227 YAL068W-AYAL068W-A 255 nt-2.28□□□□□ -2.77
YGR042WP53227 YDR183C-AYDR183C-A 258 nt-2.3□□□□□ -2.78
YGR042WP53227 snR78snR78 87 nt-2.31□□□□□ -2.78
YGR042WP53227 YJR157WYJR157W 363 nt-2.31□□□□□ -2.78
YGR042WP53227 YBR131C-AYBR131C-A 90 nt-2.37□□□□□ -2.79
YGR042WP53227 YOR293C-AYOR293C-A 150 nt-2.39□□□□□ -2.79
YGR042WP53227 YOR376W-AYOR376W-A 156 nt-2.39□□□□□ -2.79
YGR042WP53227 YLR299C-AYLR299C-A 93 nt-2.4□□□□□ -2.79
YGR042WP53227 YBR196C-AYBR196C-A 150 nt-2.4□□□□□ -2.79
YGR042WP53227 tF(GAA)QtF(GAA)Q 75 nt-2.43□□□□□ -2.8
YGR042WP53227 YER181CYER181C 324 nt-2.43□□□□□ -2.8
YGR042WP53227 YEL050W-AYEL050W-A 192 nt-2.45□□□□□ -2.8
YGR042WP53227 YLR222C-AYLR222C-A 231 nt-2.46□□□□□ -2.8
YGR042WP53227 YOR309CYOR309C 381 nt-2.47□□□□□ -2.8
YGR042WP53227 YPL038W-AYPL038W-A 192 nt-2.49□□□□□ -2.81
YGR042WP53227 YOR102WYOR102W 351 nt-2.52□□□□□ -2.81
YGR042WP53227 YPR197CYPR197C 564 nt-2.54□□□□□ -2.82
YGR042WP53227 YDR413CYDR413C 576 nt-2.55□□□□□ -2.82
YGR042WP53227 snR48snR48 113 nt-2.57□□□□□ -2.82
YGR042WP53227 YOR316C-AYOR316C-A 210 nt-2.59□□□□□ -2.82
YGR042WP53227 YGL188C-AYGL188C-A 141 nt-2.6□□□□□ -2.83
YGR042WP53227 YHR180C-BYHR180C-B 105 nt-2.6□□□□□ -2.83
YGR042WP53227 YLR342W-AYLR342W-A 174 nt-2.6□□□□□ -2.83
YGR042WP53227 YNL097C-BYNL097C-B 123 nt-2.6□□□□□ -2.83
YGR042WP53227 RPL39YJL189W 156 nt-2.64□□□□□ -2.83
YGR042WP53227 snR55snR55 98 nt-2.65□□□□□ -2.83
YGR042WP53227 YKL118WYKL118W 312 nt-2.65□□□□□ -2.83
YGR042WP53227 tL(UAA)QtL(UAA)Q 85 nt-2.66□□□□□ -2.84
YGR042WP53227 YNL277W-AYNL277W-A 189 nt-2.68□□□□□ -2.84
YGR042WP53227 YKL106C-AYKL106C-A 120 nt-2.7□□□□□ -2.84
YGR042WP53227 YPR012WYPR012W 255 nt-2.72□□□□□ -2.84
YGR042WP53227 YDR524W-CYDR524W-C 90 nt-2.76□□□□□ -2.85
YGR042WP53227 YOL083C-AYOL083C-A 141 nt-2.83□□□□□ -2.86
YGR042WP53227 YJL150WYJL150W 303 nt-2.85□□□□□ -2.87
YGR042WP53227 YDL240C-AYDL240C-A 138 nt-2.86□□□□□ -2.87
YGR042WP53227 YHL015W-AYHL015W-A 84 nt-2.86□□□□□ -2.87
YGR042WP53227 YDR157WYDR157W 402 nt-2.87□□□□□ -2.87
YGR042WP53227 YOL155W-AYOL155W-A 135 nt-2.88□□□□□ -2.87
YGR042WP53227 YOR302WYOR302W 78 nt-2.88□□□□□ -2.87
YGR042WP53227 snR52snR52 92 nt-2.9□□□□□ -2.87
YGR042WP53227 YBR109W-AYBR109W-A 225 nt-2.94□□□□□ -2.88
YGR042WP53227 GIM4YEL003W 336 nt-2.97□□□□□ -2.88
YGR042WP53227 snR6snR6 112 nt-3.01□□□□□ -2.89
YGR042WP53227 YNL198CYNL198C 303 nt-3.02□□□□□ -2.89
YGR042WP53227 YBR296C-AYBR296C-A 120 nt-3.03□□□□□ -2.89
YGR042WP53227 snR56snR56 88 nt-3.05□□□□□ -2.9
YGR042WP53227 RPL41AYDL184C 78 nt-3.06□□□□□ -2.9
YGR042WP53227 YDR543CYDR543C 300 nt-3.06□□□□□ -2.9
YGR042WP53227 YDR118W-AYDR118W-A 117 nt-3.12□□□□□ -2.91
YGR042WP53227 YPL152W-AYPL152W-A 99 nt-3.13□□□□□ -2.91
YGR042WP53227 snR80snR80 171 nt-3.14□□□□□ -2.91
YGR042WP53227 SOM1YEL059C-A 225 nt-3.15□□□□□ -2.91
YGR042WP53227 YOR335W-AYOR335W-A 81 nt-3.15□□□□□ -2.91
YGR042WP53227 snR73snR73 106 nt-3.17□□□□□ -2.92
YGR042WP53227 RPL41BYDL133C-A 78 nt-3.2□□□□□ -2.92
YGR042WP53227 Q0017Q0017 162 nt-3.2□□□□□ -2.92
YGR042WP53227 snR38snR38 95 nt-3.21□□□□□ -2.92
YGR042WP53227 snR65snR65 100 nt-3.26□□□□□ -2.93
YGR042WP53227 YCR095W-AYCR095W-A 159 nt-3.31□□□□□ -2.94
YGR042WP53227 VAR1Q0140 1197 nt-3.41□□□□□ -2.96
YGR042WP53227 YBL071C-BYBL071C-B 99 nt-3.42□□□□□ -2.96
YGR042WP53227 YBL053WYBL053W 375 nt-3.43□□□□□ -2.96
YGR042WP53227 YDR524C-AYDR524C-A 120 nt-3.44□□□□□ -2.96
YGR042WP53227 YGR151CYGR151C 336 nt-3.45□□□□□ -2.96
YGR042WP53227 YDR406W-AYDR406W-A 246 nt-3.46□□□□□ -2.96
YGR042WP53227 YOL164W-AYOL164W-A 183 nt-3.46□□□□□ -2.96
YGR042WP53227 snR47snR47 99 nt-3.53□□□□□ -2.97
YGR042WP53227 YDL114W-AYDL114W-A 114 nt-3.63□□□□□ -2.99
YGR042WP53227 snR85snR85 171 nt-3.64□□□□□ -2.99
YGR042WP53227 tV(UAC)QtV(UAC)Q 76 nt-3.64□□□□□ -2.99
YGR042WP53227 YBL100W-CYBL100W-C 120 nt-3.65□□□□□ -2.99
YGR042WP53227 YAL037C-AYAL037C-A 93 nt-3.66□□□□□ -3
YGR042WP53227 YOR231C-AYOR231C-A 201 nt-3.71□□□□□ -3
YGR042WP53227 Q0142Q0142 177 nt-3.72□□□□□ -3
YGR042WP53227 YOL166W-AYOL166W-A 156 nt-3.74□□□□□ -3.01
YGR042WP53227 YKL225WYKL225W 348 nt-3.78□□□□□ -3.01
YGR042WP53227 SPG3YDR504C 384 nt-3.85□□□□□ -3.03
YGR042WP53227 tS(GCU)Q1tS(GCU)Q1 86 nt-3.89□□□□□ -3.03
YGR042WP53227 YNL337WYNL337W 255 nt-3.91□□□□□ -3.04
YGR042WP53227 YCL001W-BYCL001W-B 255 nt-3.93□□□□□ -3.04
YGR042WP53227 snR87snR87 109 nt-3.96□□□□□ -3.04
YGR042WP53227 YHR175W-AYHR175W-A 150 nt-3.96□□□□□ -3.04
YGR042WP53227 YJR162CYJR162C 351 nt-4.06□□□□□ -3.06
YGR042WP53227 tR(ACG)Q2tR(ACG)Q2 74 nt-4.11□□□□□ -3.07
YGR042WP53227 YMR046W-AYMR046W-A 129 nt-4.15□□□□□ -3.07
YGR042WP53227 YGR122C-AYGR122C-A 129 nt-4.16□□□□□ -3.08
YGR042WP53227 YKL096C-BYKL096C-B 150 nt-4.16□□□□□ -3.08
YGR042WP53227 YDL159W-AYDL159W-A 132 nt-4.23□□□□□ -3.09
YGR042WP53227 YDR034C-AYDR034C-A 177 nt-4.29□□□□□ -3.1
Retrieved 100 of 7,029 protein–RNA pairs in 14.6 ms