Protein–RNA interactions for Protein: P53220

TIM21, Mitochondrial import inner membrane translocase subunit TIM21, yeast

Predictions only

Length 239 aa.

Protein		RNA				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	UniProt Accession	Gene	Ensembl Transcript ID	Length	Transcript Status	Prediction Score	Prediction z-Score	Detected Interaction
TIM21	P53220	URB1	YKL014C	5295 nt		-0.49	□□□□□ -2.49
TIM21	P53220	snR39B	snR39B	96 nt		-0.51	□□□□□ -2.49
TIM21	P53220	snR46	snR46	197 nt		-0.51	□□□□□ -2.49
TIM21	P53220	snR56	snR56	88 nt		-0.52	□□□□□ -2.49
TIM21	P53220	tR(ACG)Q2	tR(ACG)Q2	74 nt		-0.52	□□□□□ -2.49
TIM21	P53220	YOR170W	YOR170W	306 nt		-0.52	□□□□□ -2.49
TIM21	P53220	YNL097C-B	YNL097C-B	123 nt		-0.54	□□□□□ -2.5
TIM21	P53220	YOL155W-A	YOL155W-A	135 nt		-0.54	□□□□□ -2.5
TIM21	P53220	snR50	snR50	90 nt		-0.54	□□□□□ -2.5
TIM21	P53220	snR65	snR65	100 nt		-0.55	□□□□□ -2.5
TIM21	P53220	RDS3	YPR094W	324 nt		-0.55	□□□□□ -2.5
TIM21	P53220	PMP2	YEL017C-A	132 nt		-0.56	□□□□□ -2.5
TIM21	P53220	YER090C-A	YER090C-A	90 nt		-0.56	□□□□□ -2.5
TIM21	P53220	YGR146C-A	YGR146C-A	162 nt		-0.56	□□□□□ -2.5
TIM21	P53220	YOR329W-A	YOR329W-A	210 nt		-0.56	□□□□□ -2.5
TIM21	P53220	YNL266W	YNL266W	420 nt		-0.57	□□□□□ -2.5
TIM21	P53220	snR33	snR33	183 nt		-0.58	□□□□□ -2.5
TIM21	P53220	YOR302W	YOR302W	78 nt		-0.59	□□□□□ -2.5
TIM21	P53220	YPL152W-A	YPL152W-A	99 nt		-0.59	□□□□□ -2.5
TIM21	P53220	JLP2	YMR132C	627 nt		-0.63	□□□□□ -2.51
TIM21	P53220	snR52	snR52	92 nt		-0.64	□□□□□ -2.51
TIM21	P53220	tD(GUC)Q	tD(GUC)Q	75 nt		-0.65	□□□□□ -2.51
TIM21	P53220	YGL188C-A	YGL188C-A	141 nt		-0.65	□□□□□ -2.51
TIM21	P53220	YBR178W	YBR178W	375 nt		-0.65	□□□□□ -2.51
TIM21	P53220	YJL113W	YJL113W	4647 nt		-0.66	□□□□□ -2.51
TIM21	P53220	snR67	snR67	82 nt		-0.67	□□□□□ -2.52
TIM21	P53220	YLR286W-A	YLR286W-A	135 nt		-0.67	□□□□□ -2.52
TIM21	P53220	YNL205C	YNL205C	423 nt		-0.68	□□□□□ -2.52
TIM21	P53220	YLR342W-A	YLR342W-A	174 nt		-0.69	□□□□□ -2.52
TIM21	P53220	snR161	snR161	161 nt		-0.7	□□□□□ -2.52
TIM21	P53220	YDL159C-B	YDL159C-B	177 nt		-0.71	□□□□□ -2.52
TIM21	P53220	tL(UAA)Q	tL(UAA)Q	85 nt		-0.71	□□□□□ -2.52
TIM21	P53220	tT(UGU)G1	tT(UGU)G1	72 nt		-0.71	□□□□□ -2.52
TIM21	P53220	tT(UGU)G2	tT(UGU)G2	72 nt		-0.71	□□□□□ -2.52
TIM21	P53220	tT(UGU)P	tT(UGU)P	72 nt		-0.71	□□□□□ -2.52
TIM21	P53220	snR48	snR48	113 nt		-0.71	□□□□□ -2.52
TIM21	P53220	snR80	snR80	171 nt		-0.72	□□□□□ -2.52
TIM21	P53220	YDR524W-C	YDR524W-C	90 nt		-0.72	□□□□□ -2.52
TIM21	P53220	YOR231C-A	YOR231C-A	201 nt		-0.72	□□□□□ -2.52
TIM21	P53220	YOR102W	YOR102W	351 nt		-0.73	□□□□□ -2.53
TIM21	P53220	YHL015W-A	YHL015W-A	84 nt		-0.74	□□□□□ -2.53
TIM21	P53220	SKI7	YOR076C	2244 nt		-0.74	□□□□□ -2.53
TIM21	P53220	YHL009W-B	YHL009W-B	5409 nt		-0.76	□□□□□ -2.53
TIM21	P53220	tP(UGG)Q	tP(UGG)Q	72 nt		-0.81	□□□□□ -2.54
TIM21	P53220	YLR299C-A	YLR299C-A	93 nt		-0.81	□□□□□ -2.54
TIM21	P53220	YBR196C-A	YBR196C-A	150 nt		-0.82	□□□□□ -2.54
TIM21	P53220	YDR406W-A	YDR406W-A	246 nt		-0.83	□□□□□ -2.54
TIM21	P53220	YML054C-A	YML054C-A	159 nt		-0.86	□□□□□ -2.55
TIM21	P53220	YNL198C	YNL198C	303 nt		-0.88	□□□□□ -2.55
TIM21	P53220	YBL053W	YBL053W	375 nt		-0.93	□□□□□ -2.56
TIM21	P53220	SOM1	YEL059C-A	225 nt		-0.96	□□□□□ -2.56
TIM21	P53220	YHR180C-B	YHR180C-B	105 nt		-0.96	□□□□□ -2.56
TIM21	P53220	YJL150W	YJL150W	303 nt		-0.97	□□□□□ -2.56
TIM21	P53220	YGR240C-A	YGR240C-A	201 nt		-1	□□□□□ -2.57
TIM21	P53220	snR77	snR77	88 nt		-1.01	□□□□□ -2.57
TIM21	P53220	CDC65	tQ(CUG)M	72 nt		-1.01	□□□□□ -2.57
TIM21	P53220	YOR376W-A	YOR376W-A	156 nt		-1.02	□□□□□ -2.57
TIM21	P53220	YCR095W-A	YCR095W-A	159 nt		-1.05	□□□□□ -2.58
TIM21	P53220	YBR223W-A	YBR223W-A	120 nt		-1.05	□□□□□ -2.58
TIM21	P53220	YMR315W-A	YMR315W-A	108 nt		-1.08	□□□□□ -2.58
TIM21	P53220	YMR046W-A	YMR046W-A	129 nt		-1.09	□□□□□ -2.58
TIM21	P53220	snR81	snR81	201 nt		-1.11	□□□□□ -2.59
TIM21	P53220	SPG3	YDR504C	384 nt		-1.11	□□□□□ -2.59
TIM21	P53220	tY(GUA)Q	tY(GUA)Q	84 nt		-1.11	□□□□□ -2.59
TIM21	P53220	YKL106C-A	YKL106C-A	120 nt		-1.11	□□□□□ -2.59
TIM21	P53220	Q0142	Q0142	177 nt		-1.14	□□□□□ -2.59
TIM21	P53220	YGR151C	YGR151C	336 nt		-1.16	□□□□□ -2.6
TIM21	P53220	YOR316C-A	YOR316C-A	210 nt		-1.16	□□□□□ -2.6
TIM21	P53220	RPL41A	YDL184C	78 nt		-1.17	□□□□□ -2.6
TIM21	P53220	YOL083C-A	YOL083C-A	141 nt		-1.17	□□□□□ -2.6
TIM21	P53220	YBR109W-A	YBR109W-A	225 nt		-1.18	□□□□□ -2.6
TIM21	P53220	YBR296C-A	YBR296C-A	120 nt		-1.18	□□□□□ -2.6
TIM21	P53220	YBL071C-B	YBL071C-B	99 nt		-1.23	□□□□□ -2.61
TIM21	P53220	YCL001W-B	YCL001W-B	255 nt		-1.23	□□□□□ -2.61
TIM21	P53220	tM(CAU)Q1	tM(CAU)Q1	76 nt		-1.25	□□□□□ -2.61
TIM21	P53220	YLR466C-B	YLR466C-B	117 nt		-1.26	□□□□□ -2.61
TIM21	P53220	YOL164W-A	YOL164W-A	183 nt		-1.26	□□□□□ -2.61
TIM21	P53220	snR38	snR38	95 nt		-1.27	□□□□□ -2.61
TIM21	P53220	snR47	snR47	99 nt		-1.29	□□□□□ -2.62
TIM21	P53220	YNL338W	YNL338W	159 nt		-1.3	□□□□□ -2.62
TIM21	P53220	YAL037C-A	YAL037C-A	93 nt		-1.32	□□□□□ -2.62
TIM21	P53220	YOR309C	YOR309C	381 nt		-1.33	□□□□□ -2.62
TIM21	P53220	YBL100W-C	YBL100W-C	120 nt		-1.34	□□□□□ -2.62
TIM21	P53220	YNL337W	YNL337W	255 nt		-1.42	□□□□□ -2.64
TIM21	P53220	tS(GCU)Q1	tS(GCU)Q1	86 nt		-1.46	□□□□□ -2.64
TIM21	P53220	YNR077C	YNR077C	255 nt		-1.47	□□□□□ -2.64
TIM21	P53220	YKL225W	YKL225W	348 nt		-1.5	□□□□□ -2.65
TIM21	P53220	snR6	snR6	112 nt		-1.51	□□□□□ -2.65
TIM21	P53220	YOR335W-A	YOR335W-A	81 nt		-1.55	□□□□□ -2.66
TIM21	P53220	RPL41B	YDL133C-A	78 nt		-1.56	□□□□□ -2.66
TIM21	P53220	YGL041C-B	YGL041C-B	183 nt		-1.57	□□□□□ -2.66
TIM21	P53220	YDL114W-A	YDL114W-A	114 nt		-1.58	□□□□□ -2.66
TIM21	P53220	snR73	snR73	106 nt		-1.61	□□□□□ -2.67
TIM21	P53220	YNL103W-A	YNL103W-A	90 nt		-1.62	□□□□□ -2.67
TIM21	P53220	Q0032	Q0032	291 nt		-1.63	□□□□□ -2.67
TIM21	P53220	YDR034C-A	YDR034C-A	177 nt		-1.63	□□□□□ -2.67
TIM21	P53220	tV(UAC)Q	tV(UAC)Q	76 nt		-1.63	□□□□□ -2.67
TIM21	P53220	YBR126W-B	YBR126W-B	144 nt		-1.65	□□□□□ -2.67
TIM21	P53220	snR85	snR85	171 nt		-1.66	□□□□□ -2.68
TIM21	P53220	snR61	snR61	90 nt		-1.67	□□□□□ -2.68

Retrieved 100 of 7,029 protein–RNA pairs in 24.6 ms