Protein–RNA interactions for Protein: P53201

SWC4, SWR1-complex protein 4, yeastyeast

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SWC4P53201 YGL188C-AYGL188C-A 141 nt-0.43□□□□□ -2.48
SWC4P53201 YJL077W-AYJL077W-A 87 nt-0.45□□□□□ -2.48
SWC4P53201 tM(CAU)Q2tM(CAU)Q2 78 nt-0.47□□□□□ -2.48
SWC4P53201 SEC10YLR166C 2616 nt-0.48□□□□□ -2.49
SWC4P53201 YML100W-AYML100W-A 174 nt-0.49□□□□□ -2.49
SWC4P53201 snR69snR69 101 nt-0.51□□□□□ -2.49
SWC4P53201 YJL113WYJL113W 4647 nt-0.51□□□□□ -2.49
SWC4P53201 YGR146C-AYGR146C-A 162 nt-0.52□□□□□ -2.49
SWC4P53201 YNL067W-BYNL067W-B 141 nt-0.52□□□□□ -2.49
SWC4P53201 URB1YKL014C 5295 nt-0.53□□□□□ -2.49
SWC4P53201 snR80snR80 171 nt-0.53□□□□□ -2.49
SWC4P53201 YOR329W-AYOR329W-A 210 nt-0.53□□□□□ -2.49
SWC4P53201 snR39BsnR39B 96 nt-0.53□□□□□ -2.49
SWC4P53201 tQ(UUG)QtQ(UUG)Q 76 nt-0.54□□□□□ -2.5
SWC4P53201 YDL007C-AYDL007C-A 258 nt-0.55□□□□□ -2.5
SWC4P53201 YIL071W-AYIL071W-A 477 nt-0.55□□□□□ -2.5
SWC4P53201 PMP2YEL017C-A 132 nt-0.59□□□□□ -2.5
SWC4P53201 snR52snR52 92 nt-0.6□□□□□ -2.51
SWC4P53201 tA(UGC)QtA(UGC)Q 76 nt-0.61□□□□□ -2.51
SWC4P53201 snR48snR48 113 nt-0.61□□□□□ -2.51
SWC4P53201 YER090C-AYER090C-A 90 nt-0.64□□□□□ -2.51
SWC4P53201 RDS3YPR094W 324 nt-0.64□□□□□ -2.51
SWC4P53201 Q0142Q0142 177 nt-0.65□□□□□ -2.51
SWC4P53201 YLR342W-AYLR342W-A 174 nt-0.65□□□□□ -2.51
SWC4P53201 PAU9YBL108C-A 129 nt-0.67□□□□□ -2.52
SWC4P53201 snR50snR50 90 nt-0.68□□□□□ -2.52
SWC4P53201 tL(UAA)QtL(UAA)Q 85 nt-0.69□□□□□ -2.52
SWC4P53201 YNL266WYNL266W 420 nt-0.69□□□□□ -2.52
SWC4P53201 JLP2YMR132C 627 nt-0.71□□□□□ -2.52
SWC4P53201 tD(GUC)QtD(GUC)Q 75 nt-0.74□□□□□ -2.53
SWC4P53201 YNL205CYNL205C 423 nt-0.75□□□□□ -2.53
SWC4P53201 YHL009W-BYHL009W-B 5409 nt-0.76□□□□□ -2.53
SWC4P53201 tT(UGU)G1tT(UGU)G1 72 nt-0.78□□□□□ -2.53
SWC4P53201 tT(UGU)G2tT(UGU)G2 72 nt-0.78□□□□□ -2.53
SWC4P53201 tT(UGU)PtT(UGU)P 72 nt-0.78□□□□□ -2.53
SWC4P53201 snR33snR33 183 nt-0.79□□□□□ -2.54
SWC4P53201 YHL015W-AYHL015W-A 84 nt-0.8□□□□□ -2.54
SWC4P53201 YOR102WYOR102W 351 nt-0.8□□□□□ -2.54
SWC4P53201 YLR286W-AYLR286W-A 135 nt-0.81□□□□□ -2.54
SWC4P53201 YBR178WYBR178W 375 nt-0.81□□□□□ -2.54
SWC4P53201 YDR406W-AYDR406W-A 246 nt-0.82□□□□□ -2.54
SWC4P53201 YNR077CYNR077C 255 nt-0.83□□□□□ -2.54
SWC4P53201 YDL159C-BYDL159C-B 177 nt-0.87□□□□□ -2.55
SWC4P53201 snR67snR67 82 nt-0.88□□□□□ -2.55
SWC4P53201 YJL150WYJL150W 303 nt-0.91□□□□□ -2.56
SWC4P53201 YNL198CYNL198C 303 nt-0.91□□□□□ -2.56
SWC4P53201 snR161snR161 161 nt-0.92□□□□□ -2.56
SWC4P53201 SKI7YOR076C 2244 nt-0.96□□□□□ -2.56
SWC4P53201 YBR223W-AYBR223W-A 120 nt-0.97□□□□□ -2.56
SWC4P53201 YMR046W-AYMR046W-A 129 nt-1□□□□□ -2.57
SWC4P53201 YBL053WYBL053W 375 nt-1□□□□□ -2.57
SWC4P53201 YLR299C-AYLR299C-A 93 nt-1.01□□□□□ -2.57
SWC4P53201 YBR196C-AYBR196C-A 150 nt-1.01□□□□□ -2.57
SWC4P53201 SPG3YDR504C 384 nt-1.09□□□□□ -2.58
SWC4P53201 tP(UGG)QtP(UGG)Q 72 nt-1.11□□□□□ -2.59
SWC4P53201 SOM1YEL059C-A 225 nt-1.12□□□□□ -2.59
SWC4P53201 YCR095W-AYCR095W-A 159 nt-1.19□□□□□ -2.6
SWC4P53201 tM(CAU)Q1tM(CAU)Q1 76 nt-1.19□□□□□ -2.6
SWC4P53201 YML054C-AYML054C-A 159 nt-1.19□□□□□ -2.6
SWC4P53201 YHR180C-BYHR180C-B 105 nt-1.29□□□□□ -2.62
SWC4P53201 snR77snR77 88 nt-1.32□□□□□ -2.62
SWC4P53201 YLR466C-BYLR466C-B 117 nt-1.32□□□□□ -2.62
SWC4P53201 CDC65tQ(CUG)M 72 nt-1.35□□□□□ -2.63
SWC4P53201 YGR151CYGR151C 336 nt-1.39□□□□□ -2.63
SWC4P53201 YOR376W-AYOR376W-A 156 nt-1.41□□□□□ -2.64
SWC4P53201 YGR240C-AYGR240C-A 201 nt-1.46□□□□□ -2.64
SWC4P53201 YNL338WYNL338W 159 nt-1.46□□□□□ -2.64
SWC4P53201 YCL001W-BYCL001W-B 255 nt-1.46□□□□□ -2.64
SWC4P53201 tY(GUA)QtY(GUA)Q 84 nt-1.5□□□□□ -2.65
SWC4P53201 YOL083C-AYOL083C-A 141 nt-1.51□□□□□ -2.65
SWC4P53201 YBL071C-BYBL071C-B 99 nt-1.53□□□□□ -2.65
SWC4P53201 YBR109W-AYBR109W-A 225 nt-1.53□□□□□ -2.65
SWC4P53201 YMR315W-AYMR315W-A 108 nt-1.55□□□□□ -2.66
SWC4P53201 YBR296C-AYBR296C-A 120 nt-1.55□□□□□ -2.66
SWC4P53201 YKL106C-AYKL106C-A 120 nt-1.56□□□□□ -2.66
SWC4P53201 snR81snR81 201 nt-1.57□□□□□ -2.66
SWC4P53201 RPL41AYDL184C 78 nt-1.57□□□□□ -2.66
SWC4P53201 YOR316C-AYOR316C-A 210 nt-1.59□□□□□ -2.66
SWC4P53201 YOL164W-AYOL164W-A 183 nt-1.61□□□□□ -2.67
SWC4P53201 YAL037C-AYAL037C-A 93 nt-1.63□□□□□ -2.67
SWC4P53201 snR38snR38 95 nt-1.64□□□□□ -2.67
SWC4P53201 YNL337WYNL337W 255 nt-1.67□□□□□ -2.68
SWC4P53201 Q0032Q0032 291 nt-1.73□□□□□ -2.69
SWC4P53201 snR47snR47 99 nt-1.74□□□□□ -2.69
SWC4P53201 YGL007C-AYGL007C-A 87 nt-1.79□□□□□ -2.7
SWC4P53201 YBL100W-CYBL100W-C 120 nt-1.8□□□□□ -2.7
SWC4P53201 YOR309CYOR309C 381 nt-1.8□□□□□ -2.7
SWC4P53201 tS(GCU)Q1tS(GCU)Q1 86 nt-1.97□□□□□ -2.72
SWC4P53201 snR6snR6 112 nt-1.99□□□□□ -2.73
SWC4P53201 YKL225WYKL225W 348 nt-2□□□□□ -2.73
SWC4P53201 YGL041C-BYGL041C-B 183 nt-2.02□□□□□ -2.73
SWC4P53201 YBR126W-BYBR126W-B 144 nt-2.02□□□□□ -2.73
SWC4P53201 YNL103W-AYNL103W-A 90 nt-2.03□□□□□ -2.73
SWC4P53201 snR61snR61 90 nt-2.07□□□□□ -2.74
SWC4P53201 YLR294CYLR294C 330 nt-2.12□□□□□ -2.75
SWC4P53201 YOR225WYOR225W 330 nt-2.14□□□□□ -2.75
SWC4P53201 YOR335W-AYOR335W-A 81 nt-2.14□□□□□ -2.75
SWC4P53201 snR73snR73 106 nt-2.18□□□□□ -2.76
SWC4P53201 YDR034C-AYDR034C-A 177 nt-2.18□□□□□ -2.76
SWC4P53201 YOL166W-AYOL166W-A 156 nt-2.18□□□□□ -2.76
Retrieved 100 of 7,029 protein–RNA pairs in 12.5 ms