Protein–RNA interactions for Protein: P53117

RRT6, Regulator of rDNA transcription protein 6, yeastyeast

Predicted RBP Predictions only

Length 311 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RRT6P53117 ORC3YLL004W 1851 nt0.42□□□□□ -2.34
RRT6P53117 YOR102WYOR102W 351 nt0.41□□□□□ -2.34
RRT6P53117 snR39BsnR39B 96 nt0.4□□□□□ -2.35
RRT6P53117 YDR210WYDR210W 228 nt0.39□□□□□ -2.35
RRT6P53117 YLR466C-BYLR466C-B 117 nt0.39□□□□□ -2.35
RRT6P53117 YGR151CYGR151C 336 nt0.38□□□□□ -2.35
RRT6P53117 YOR329W-AYOR329W-A 210 nt0.36□□□□□ -2.35
RRT6P53117 YGR146C-AYGR146C-A 162 nt0.34□□□□□ -2.36
RRT6P53117 Q0032Q0032 291 nt0.33□□□□□ -2.36
RRT6P53117 YDL007C-AYDL007C-A 258 nt0.31□□□□□ -2.36
RRT6P53117 YBR099CYBR099C 384 nt0.31□□□□□ -2.36
RRT6P53117 YBL100W-BYBL100W-B 5313 nt0.31□□□□□ -2.36
RRT6P53117 YNL067W-BYNL067W-B 141 nt0.29□□□□□ -2.36
RRT6P53117 YOL013W-AYOL013W-A 192 nt0.28□□□□□ -2.36
RRT6P53117 YNL054W-BYNL054W-B 5250 nt0.26□□□□□ -2.37
RRT6P53117 YJL077W-AYJL077W-A 87 nt0.26□□□□□ -2.37
RRT6P53117 YNL198CYNL198C 303 nt0.26□□□□□ -2.37
RRT6P53117 tL(UAA)QtL(UAA)Q 85 nt0.24□□□□□ -2.37
RRT6P53117 ESP1YGR098C 4893 nt0.21□□□□□ -2.38
RRT6P53117 YNL338WYNL338W 159 nt0.21□□□□□ -2.38
RRT6P53117 snR45snR45 172 nt0.2□□□□□ -2.38
RRT6P53117 EST1YLR233C 2100 nt0.19□□□□□ -2.38
RRT6P53117 YGL007C-AYGL007C-A 87 nt0.19□□□□□ -2.38
RRT6P53117 YNL205CYNL205C 423 nt0.19□□□□□ -2.38
RRT6P53117 PMP2YEL017C-A 132 nt0.12□□□□□ -2.39
RRT6P53117 tQ(UUG)QtQ(UUG)Q 76 nt0.11□□□□□ -2.39
RRT6P53117 snR69snR69 101 nt0.1□□□□□ -2.39
RRT6P53117 snR128snR128 126 nt0.1□□□□□ -2.39
RRT6P53117 YCR095W-AYCR095W-A 159 nt0.07□□□□□ -2.4
RRT6P53117 SOM1YEL059C-A 225 nt0.06□□□□□ -2.4
RRT6P53117 YBL053WYBL053W 375 nt0.06□□□□□ -2.4
RRT6P53117 RDS3YPR094W 324 nt0.06□□□□□ -2.4
RRT6P53117 SOV1YMR066W 2697 nt0.03□□□□□ -2.4
RRT6P53117 SEC10YLR166C 2616 nt0.02□□□□□ -2.41
RRT6P53117 TFB5YDR079C-A 219 nt0□□□□□ -2.41
RRT6P53117 YGR164WYGR164W 336 nt0□□□□□ -2.41
RRT6P53117 tD(GUC)QtD(GUC)Q 75 nt-0.01□□□□□ -2.41
RRT6P53117 YPL060C-AYPL060C-A 3315 nt-0.01□□□□□ -2.41
RRT6P53117 YNL266WYNL266W 420 nt-0.05□□□□□ -2.42
RRT6P53117 YOR225WYOR225W 330 nt-0.05□□□□□ -2.42
RRT6P53117 YJL113WYJL113W 4647 nt-0.07□□□□□ -2.42
RRT6P53117 YLR294CYLR294C 330 nt-0.08□□□□□ -2.42
RRT6P53117 YBR196C-AYBR196C-A 150 nt-0.08□□□□□ -2.42
RRT6P53117 YER090C-AYER090C-A 90 nt-0.1□□□□□ -2.43
RRT6P53117 YBR178WYBR178W 375 nt-0.1□□□□□ -2.43
RRT6P53117 YLR286W-AYLR286W-A 135 nt-0.11□□□□□ -2.43
RRT6P53117 YDL159C-BYDL159C-B 177 nt-0.13□□□□□ -2.43
RRT6P53117 YCL001W-BYCL001W-B 255 nt-0.16□□□□□ -2.44
RRT6P53117 SBH2YER019C-A 267 nt-0.18□□□□□ -2.44
RRT6P53117 YLR299C-AYLR299C-A 93 nt-0.21□□□□□ -2.44
RRT6P53117 YML100W-AYML100W-A 174 nt-0.21□□□□□ -2.44
RRT6P53117 snR50snR50 90 nt-0.22□□□□□ -2.44
RRT6P53117 YIL071W-AYIL071W-A 477 nt-0.24□□□□□ -2.45
RRT6P53117 snR67snR67 82 nt-0.29□□□□□ -2.46
RRT6P53117 PAU9YBL108C-A 129 nt-0.3□□□□□ -2.46
RRT6P53117 YNL170WYNL170W 396 nt-0.36□□□□□ -2.47
RRT6P53117 tA(UGC)QtA(UGC)Q 76 nt-0.44□□□□□ -2.48
RRT6P53117 YHR180C-BYHR180C-B 105 nt-0.45□□□□□ -2.48
RRT6P53117 ATP8Q0080 147 nt-0.46□□□□□ -2.48
RRT6P53117 YAL037C-AYAL037C-A 93 nt-0.53□□□□□ -2.49
RRT6P53117 YML054C-AYML054C-A 159 nt-0.53□□□□□ -2.49
RRT6P53117 YOL083C-AYOL083C-A 141 nt-0.53□□□□□ -2.49
RRT6P53117 URB1YKL014C 5295 nt-0.53□□□□□ -2.49
RRT6P53117 YNR077CYNR077C 255 nt-0.57□□□□□ -2.5
RRT6P53117 YBL100W-CYBL100W-C 120 nt-0.58□□□□□ -2.5
RRT6P53117 tT(UGU)G1tT(UGU)G1 72 nt-0.61□□□□□ -2.51
RRT6P53117 tT(UGU)G2tT(UGU)G2 72 nt-0.61□□□□□ -2.51
RRT6P53117 tT(UGU)PtT(UGU)P 72 nt-0.61□□□□□ -2.51
RRT6P53117 Q0092Q0092 141 nt-0.63□□□□□ -2.51
RRT6P53117 SKI7YOR076C 2244 nt-0.64□□□□□ -2.51
RRT6P53117 YBL071C-BYBL071C-B 99 nt-0.64□□□□□ -2.51
RRT6P53117 YHL009W-BYHL009W-B 5409 nt-0.64□□□□□ -2.51
RRT6P53117 snR61snR61 90 nt-0.66□□□□□ -2.52
RRT6P53117 YOL164W-AYOL164W-A 183 nt-0.66□□□□□ -2.52
RRT6P53117 snR161snR161 161 nt-0.68□□□□□ -2.52
RRT6P53117 snR33snR33 183 nt-0.68□□□□□ -2.52
RRT6P53117 snR81snR81 201 nt-0.7□□□□□ -2.52
RRT6P53117 RPL41AYDL184C 78 nt-0.7□□□□□ -2.52
RRT6P53117 YNL103W-AYNL103W-A 90 nt-0.71□□□□□ -2.52
RRT6P53117 YGL041C-BYGL041C-B 183 nt-0.73□□□□□ -2.53
RRT6P53117 YBR296C-AYBR296C-A 120 nt-0.73□□□□□ -2.53
RRT6P53117 YGR240C-AYGR240C-A 201 nt-0.79□□□□□ -2.54
RRT6P53117 snR47snR47 99 nt-0.8□□□□□ -2.54
RRT6P53117 YBR109W-AYBR109W-A 225 nt-0.83□□□□□ -2.54
RRT6P53117 YBR223W-AYBR223W-A 120 nt-0.86□□□□□ -2.55
RRT6P53117 YKL106C-AYKL106C-A 120 nt-0.92□□□□□ -2.56
RRT6P53117 Q0143Q0143 153 nt-0.93□□□□□ -2.56
RRT6P53117 tP(UGG)QtP(UGG)Q 72 nt-0.95□□□□□ -2.56
RRT6P53117 YOR376W-AYOR376W-A 156 nt-1.03□□□□□ -2.57
RRT6P53117 YMR326CYMR326C 309 nt-1.04□□□□□ -2.58
RRT6P53117 snR38snR38 95 nt-1.04□□□□□ -2.58
RRT6P53117 snR62snR62 100 nt-1.05□□□□□ -2.58
RRT6P53117 YDR034C-AYDR034C-A 177 nt-1.07□□□□□ -2.58
RRT6P53117 tS(GCU)Q1tS(GCU)Q1 86 nt-1.09□□□□□ -2.58
RRT6P53117 YOR316C-AYOR316C-A 210 nt-1.09□□□□□ -2.58
RRT6P53117 YKL225WYKL225W 348 nt-1.11□□□□□ -2.59
RRT6P53117 snR85snR85 171 nt-1.14□□□□□ -2.59
RRT6P53117 YHR217CYHR217C 462 nt-1.19□□□□□ -2.6
RRT6P53117 snR77snR77 88 nt-1.27□□□□□ -2.61
RRT6P53117 CDC65tQ(CUG)M 72 nt-1.3□□□□□ -2.62
Retrieved 100 of 7,029 protein–RNA pairs in 12.7 ms