Protein–RNA interactions for Protein: P53104

ATG1, Serine/threonine-protein kinase ATG1, yeastyeast

Predictions only

Length 897 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
ATG1P53104 RKR1YMR247C 4689 nt1.27□□□□□ -2.21
ATG1P53104 NST1YNL091W 3723 nt1.27□□□□□ -2.21
ATG1P53104 YIL142C-AYIL142C-A 333 nt1.26□□□□□ -2.21
ATG1P53104 tD(GUC)QtD(GUC)Q 75 nt1.23□□□□□ -2.21
ATG1P53104 EST1YLR233C 2100 nt1.22□□□□□ -2.21
ATG1P53104 YBL071C-BYBL071C-B 99 nt1.22□□□□□ -2.21
ATG1P53104 BEM2YER155C 6504 nt1.2□□□□□ -2.22
ATG1P53104 snR69snR69 101 nt1.2□□□□□ -2.22
ATG1P53104 YOL014WYOL014W 375 nt1.2□□□□□ -2.22
ATG1P53104 NIP1YMR309C 2439 nt1.2□□□□□ -2.22
ATG1P53104 YPR117WYPR117W 7470 nt1.2□□□□□ -2.22
ATG1P53104 RPS26AYGL189C 360 nt1.19□□□□□ -2.22
ATG1P53104 YLL066W-BYLL066W-B 171 nt1.19□□□□□ -2.22
ATG1P53104 YLR286W-AYLR286W-A 135 nt1.19□□□□□ -2.22
ATG1P53104 UTP20YBL004W 7482 nt1.18□□□□□ -2.22
ATG1P53104 BUL2YML111W 2763 nt1.17□□□□□ -2.22
ATG1P53104 snR62snR62 100 nt1.17□□□□□ -2.22
ATG1P53104 YPL060C-AYPL060C-A 3315 nt1.17□□□□□ -2.22
ATG1P53104 snR45snR45 172 nt1.15□□□□□ -2.23
ATG1P53104 VAM6YDL077C 3150 nt1.14□□□□□ -2.23
ATG1P53104 YOR192C-BYOR192C-B 5313 nt1.14□□□□□ -2.23
ATG1P53104 YJL077W-AYJL077W-A 87 nt1.14□□□□□ -2.23
ATG1P53104 LTE1YAL024C 4308 nt1.13□□□□□ -2.23
ATG1P53104 YBL100W-CYBL100W-C 120 nt1.13□□□□□ -2.23
ATG1P53104 YJR029WYJR029W 5268 nt1.13□□□□□ -2.23
ATG1P53104 YPR137C-BYPR137C-B 5268 nt1.13□□□□□ -2.23
ATG1P53104 YOL164W-AYOL164W-A 183 nt1.12□□□□□ -2.23
ATG1P53104 RDS3YPR094W 324 nt1.12□□□□□ -2.23
ATG1P53104 PET111YMR257C 2403 nt1.09□□□□□ -2.23
ATG1P53104 YDL159C-BYDL159C-B 177 nt1.08□□□□□ -2.24
ATG1P53104 YLR299C-AYLR299C-A 93 nt1.08□□□□□ -2.24
ATG1P53104 YDR371C-AYDR371C-A 105 nt1.06□□□□□ -2.24
ATG1P53104 YGR240C-AYGR240C-A 201 nt1.04□□□□□ -2.24
ATG1P53104 EMT1tM(CAU)D 73 nt1.03□□□□□ -2.24
ATG1P53104 EMT5tM(CAU)J1 73 nt1.03□□□□□ -2.24
ATG1P53104 EMT3tM(CAU)J2 73 nt1.03□□□□□ -2.24
ATG1P53104 EMT4tM(CAU)M 73 nt1.03□□□□□ -2.24
ATG1P53104 EMT2tM(CAU)O2 73 nt1.03□□□□□ -2.24
ATG1P53104 YKL145W-AYKL145W-A 93 nt1.03□□□□□ -2.24
ATG1P53104 YMR160WYMR160W 2451 nt1.03□□□□□ -2.25
ATG1P53104 tQ(UUG)QtQ(UUG)Q 76 nt1.01□□□□□ -2.25
ATG1P53104 YDR034C-AYDR034C-A 177 nt0.99□□□□□ -2.25
ATG1P53104 snR47snR47 99 nt0.96□□□□□ -2.26
ATG1P53104 ORC3YLL004W 1851 nt0.95□□□□□ -2.26
ATG1P53104 MLP1YKR095W 5628 nt0.94□□□□□ -2.26
ATG1P53104 YPR159C-AYPR159C-A 102 nt0.89□□□□□ -2.27
ATG1P53104 YHR180C-BYHR180C-B 105 nt0.86□□□□□ -2.27
ATG1P53104 YER090C-AYER090C-A 90 nt0.85□□□□□ -2.27
ATG1P53104 YBL100W-BYBL100W-B 5313 nt0.85□□□□□ -2.27
ATG1P53104 YML054C-AYML054C-A 159 nt0.83□□□□□ -2.28
ATG1P53104 tT(AGU)BtT(AGU)B 73 nt0.81□□□□□ -2.28
ATG1P53104 tT(AGU)CtT(AGU)C 73 nt0.81□□□□□ -2.28
ATG1P53104 tT(AGU)DtT(AGU)D 73 nt0.81□□□□□ -2.28
ATG1P53104 tT(AGU)HtT(AGU)H 73 nt0.81□□□□□ -2.28
ATG1P53104 tT(AGU)I1tT(AGU)I1 73 nt0.81□□□□□ -2.28
ATG1P53104 tT(AGU)I2tT(AGU)I2 73 nt0.81□□□□□ -2.28
ATG1P53104 tT(AGU)JtT(AGU)J 73 nt0.81□□□□□ -2.28
ATG1P53104 tT(AGU)N1tT(AGU)N1 73 nt0.81□□□□□ -2.28
ATG1P53104 tT(AGU)N2tT(AGU)N2 73 nt0.81□□□□□ -2.28
ATG1P53104 tT(AGU)O1tT(AGU)O1 73 nt0.81□□□□□ -2.28
ATG1P53104 tT(AGU)O2tT(AGU)O2 73 nt0.81□□□□□ -2.28
ATG1P53104 YNL054W-BYNL054W-B 5250 nt0.78□□□□□ -2.28
ATG1P53104 snR50snR50 90 nt0.78□□□□□ -2.28
ATG1P53104 MYO1YHR023W 5787 nt0.77□□□□□ -2.29
ATG1P53104 AI1Q0050 2505 nt0.76□□□□□ -2.29
ATG1P53104 IQG1YPL242C 4488 nt0.74□□□□□ -2.29
ATG1P53104 YOR186C-AYOR186C-A 210 nt0.73□□□□□ -2.29
ATG1P53104 RPL41AYDL184C 78 nt0.72□□□□□ -2.29
ATG1P53104 UTP10YJL109C 5310 nt0.72□□□□□ -2.29
ATG1P53104 YBR109W-AYBR109W-A 225 nt0.71□□□□□ -2.3
ATG1P53104 THO2YNL139C 4794 nt0.69□□□□□ -2.3
ATG1P53104 YBR296C-AYBR296C-A 120 nt0.68□□□□□ -2.3
ATG1P53104 YMR272W-AYMR272W-A 114 nt0.67□□□□□ -2.3
ATG1P53104 YKL225WYKL225W 348 nt0.64□□□□□ -2.31
ATG1P53104 FMP27YLR454W 7887 nt0.64□□□□□ -2.31
ATG1P53104 snR67snR67 82 nt0.63□□□□□ -2.31
ATG1P53104 snR64snR64 101 nt0.61□□□□□ -2.31
ATG1P53104 MLP2YIL149C 5040 nt0.6□□□□□ -2.31
ATG1P53104 YER078W-AYER078W-A 165 nt0.59□□□□□ -2.31
ATG1P53104 snR38snR38 95 nt0.56□□□□□ -2.32
ATG1P53104 snR53snR53 91 nt0.52□□□□□ -2.33
ATG1P53104 SOV1YMR066W 2697 nt0.45□□□□□ -2.34
ATG1P53104 YML100W-AYML100W-A 174 nt0.43□□□□□ -2.34
ATG1P53104 YOL013W-AYOL013W-A 192 nt0.39□□□□□ -2.35
ATG1P53104 SKI7YOR076C 2244 nt0.36□□□□□ -2.35
ATG1P53104 ESP1YGR098C 4893 nt0.35□□□□□ -2.35
ATG1P53104 snR128snR128 126 nt0.35□□□□□ -2.35
ATG1P53104 YDL159W-AYDL159W-A 132 nt0.25□□□□□ -2.37
ATG1P53104 YKL106C-AYKL106C-A 120 nt0.19□□□□□ -2.38
ATG1P53104 YGR122C-AYGR122C-A 129 nt0.17□□□□□ -2.38
ATG1P53104 PAU9YBL108C-A 129 nt0.15□□□□□ -2.39
ATG1P53104 YLR149C-AYLR149C-A 87 nt0.03□□□□□ -2.4
ATG1P53104 YOR376W-AYOR376W-A 156 nt-0.01□□□□□ -2.41
ATG1P53104 tA(UGC)QtA(UGC)Q 76 nt-0.04□□□□□ -2.42
ATG1P53104 SBH2YER019C-A 267 nt-0.1□□□□□ -2.43
ATG1P53104 YOR316C-AYOR316C-A 210 nt-0.1□□□□□ -2.43
ATG1P53104 YDL114W-AYDL114W-A 114 nt-0.12□□□□□ -2.43
ATG1P53104 YKL096C-BYKL096C-B 150 nt-0.18□□□□□ -2.44
ATG1P53104 tV(UAC)QtV(UAC)Q 76 nt-0.21□□□□□ -2.44
ATG1P53104 snR161snR161 161 nt-0.28□□□□□ -2.45
Retrieved 100 of 7,029 protein–RNA pairs in 13 ms