Protein–RNA interactions for Protein: P53056

YGL260W, Putative UPF0377 protein YGL260W, yeastyeast

Predictions only

Length 76 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
YGL260WP53056 GLG1YKR058W 1851 nt0.87□□□□□ -2.27
YGL260WP53056 RPS26AYGL189C 360 nt0.87□□□□□ -2.27
YGL260WP53056 SEC10YLR166C 2616 nt0.87□□□□□ -2.27
YGL260WP53056 ULP2YIL031W 3105 nt0.87□□□□□ -2.27
YGL260WP53056 RKR1YMR247C 4689 nt0.86□□□□□ -2.27
YGL260WP53056 snR62snR62 100 nt0.86□□□□□ -2.27
YGL260WP53056 YKL145W-AYKL145W-A 93 nt0.86□□□□□ -2.27
YGL260WP53056 IRA1YBR140C 9279 nt0.85□□□□□ -2.27
YGL260WP53056 YLR286W-AYLR286W-A 135 nt0.82□□□□□ -2.28
YGL260WP53056 UTP20YBL004W 7482 nt0.81□□□□□ -2.28
YGL260WP53056 EST1YLR233C 2100 nt0.8□□□□□ -2.28
YGL260WP53056 YMR247W-AYMR247W-A 144 nt0.8□□□□□ -2.28
YGL260WP53056 CSE1YGL238W 2883 nt0.8□□□□□ -2.28
YGL260WP53056 BUL2YML111W 2763 nt0.79□□□□□ -2.28
YGL260WP53056 snR69snR69 101 nt0.79□□□□□ -2.28
YGL260WP53056 YLL006W-AYLL006W-A 177 nt0.79□□□□□ -2.28
YGL260WP53056 YPR117WYPR117W 7470 nt0.79□□□□□ -2.28
YGL260WP53056 YNL054W-BYNL054W-B 5250 nt0.78□□□□□ -2.28
YGL260WP53056 tD(GUC)QtD(GUC)Q 75 nt0.78□□□□□ -2.28
YGL260WP53056 YOL164W-AYOL164W-A 183 nt0.78□□□□□ -2.28
YGL260WP53056 YMR160WYMR160W 2451 nt0.78□□□□□ -2.28
YGL260WP53056 YJR029WYJR029W 5268 nt0.76□□□□□ -2.29
YGL260WP53056 YPR137C-BYPR137C-B 5268 nt0.76□□□□□ -2.29
YGL260WP53056 NIP1YMR309C 2439 nt0.76□□□□□ -2.29
YGL260WP53056 YOR192C-BYOR192C-B 5313 nt0.75□□□□□ -2.29
YGL260WP53056 YDR034C-AYDR034C-A 177 nt0.74□□□□□ -2.29
YGL260WP53056 YGR240C-AYGR240C-A 201 nt0.74□□□□□ -2.29
YGL260WP53056 ORC3YLL004W 1851 nt0.73□□□□□ -2.29
YGL260WP53056 YLR299C-AYLR299C-A 93 nt0.71□□□□□ -2.3
YGL260WP53056 YBL100W-CYBL100W-C 120 nt0.71□□□□□ -2.3
YGL260WP53056 RDS3YPR094W 324 nt0.71□□□□□ -2.3
YGL260WP53056 YDL159C-BYDL159C-B 177 nt0.7□□□□□ -2.3
YGL260WP53056 snR47snR47 99 nt0.7□□□□□ -2.3
YGL260WP53056 SCC2YDR180W 4482 nt0.7□□□□□ -2.3
YGL260WP53056 BEM2YER155C 6504 nt0.69□□□□□ -2.3
YGL260WP53056 EMT1tM(CAU)D 73 nt0.66□□□□□ -2.3
YGL260WP53056 EMT5tM(CAU)J1 73 nt0.66□□□□□ -2.3
YGL260WP53056 EMT3tM(CAU)J2 73 nt0.66□□□□□ -2.3
YGL260WP53056 EMT4tM(CAU)M 73 nt0.66□□□□□ -2.3
YGL260WP53056 EMT2tM(CAU)O2 73 nt0.66□□□□□ -2.3
YGL260WP53056 YJL077W-AYJL077W-A 87 nt0.66□□□□□ -2.3
YGL260WP53056 YDR371C-AYDR371C-A 105 nt0.65□□□□□ -2.31
YGL260WP53056 LTE1YAL024C 4308 nt0.64□□□□□ -2.31
YGL260WP53056 YML054C-AYML054C-A 159 nt0.63□□□□□ -2.31
YGL260WP53056 tT(AGU)BtT(AGU)B 73 nt0.62□□□□□ -2.31
YGL260WP53056 tT(AGU)CtT(AGU)C 73 nt0.62□□□□□ -2.31
YGL260WP53056 tT(AGU)DtT(AGU)D 73 nt0.62□□□□□ -2.31
YGL260WP53056 tT(AGU)HtT(AGU)H 73 nt0.62□□□□□ -2.31
YGL260WP53056 tT(AGU)I1tT(AGU)I1 73 nt0.62□□□□□ -2.31
YGL260WP53056 tT(AGU)I2tT(AGU)I2 73 nt0.62□□□□□ -2.31
YGL260WP53056 tT(AGU)JtT(AGU)J 73 nt0.62□□□□□ -2.31
YGL260WP53056 tT(AGU)N1tT(AGU)N1 73 nt0.62□□□□□ -2.31
YGL260WP53056 tT(AGU)N2tT(AGU)N2 73 nt0.62□□□□□ -2.31
YGL260WP53056 tT(AGU)O1tT(AGU)O1 73 nt0.62□□□□□ -2.31
YGL260WP53056 tT(AGU)O2tT(AGU)O2 73 nt0.62□□□□□ -2.31
YGL260WP53056 PET111YMR257C 2403 nt0.61□□□□□ -2.31
YGL260WP53056 VAM6YDL077C 3150 nt0.59□□□□□ -2.31
YGL260WP53056 tQ(UUG)QtQ(UUG)Q 76 nt0.59□□□□□ -2.31
YGL260WP53056 YBL100W-BYBL100W-B 5313 nt0.58□□□□□ -2.32
YGL260WP53056 YBR109W-AYBR109W-A 225 nt0.57□□□□□ -2.32
YGL260WP53056 snR50snR50 90 nt0.57□□□□□ -2.32
YGL260WP53056 YHR180C-BYHR180C-B 105 nt0.56□□□□□ -2.32
YGL260WP53056 YER090C-AYER090C-A 90 nt0.55□□□□□ -2.32
YGL260WP53056 snR38snR38 95 nt0.54□□□□□ -2.32
YGL260WP53056 snR64snR64 101 nt0.53□□□□□ -2.32
YGL260WP53056 AI1Q0050 2505 nt0.53□□□□□ -2.33
YGL260WP53056 YKL225WYKL225W 348 nt0.52□□□□□ -2.33
YGL260WP53056 snR53snR53 91 nt0.5□□□□□ -2.33
YGL260WP53056 RPL41AYDL184C 78 nt0.49□□□□□ -2.33
YGL260WP53056 YBR296C-AYBR296C-A 120 nt0.49□□□□□ -2.33
YGL260WP53056 YER078W-AYER078W-A 165 nt0.46□□□□□ -2.34
YGL260WP53056 FMP27YLR454W 7887 nt0.45□□□□□ -2.34
YGL260WP53056 UTP10YJL109C 5310 nt0.45□□□□□ -2.34
YGL260WP53056 MLP1YKR095W 5628 nt0.43□□□□□ -2.34
YGL260WP53056 snR67snR67 82 nt0.42□□□□□ -2.34
YGL260WP53056 YPR159C-AYPR159C-A 102 nt0.42□□□□□ -2.34
YGL260WP53056 IQG1YPL242C 4488 nt0.41□□□□□ -2.34
YGL260WP53056 YMR272W-AYMR272W-A 114 nt0.39□□□□□ -2.35
YGL260WP53056 MLP2YIL149C 5040 nt0.38□□□□□ -2.35
YGL260WP53056 SOV1YMR066W 2697 nt0.38□□□□□ -2.35
YGL260WP53056 ESP1YGR098C 4893 nt0.37□□□□□ -2.35
YGL260WP53056 YDL159W-AYDL159W-A 132 nt0.36□□□□□ -2.35
YGL260WP53056 YOR186C-AYOR186C-A 210 nt0.36□□□□□ -2.35
YGL260WP53056 YML100W-AYML100W-A 174 nt0.32□□□□□ -2.36
YGL260WP53056 SKI7YOR076C 2244 nt0.32□□□□□ -2.36
YGL260WP53056 THO2YNL139C 4794 nt0.31□□□□□ -2.36
YGL260WP53056 YGR122C-AYGR122C-A 129 nt0.27□□□□□ -2.37
YGL260WP53056 YLR149C-AYLR149C-A 87 nt0.24□□□□□ -2.37
YGL260WP53056 YOL013W-AYOL013W-A 192 nt0.24□□□□□ -2.37
YGL260WP53056 YKL106C-AYKL106C-A 120 nt0.19□□□□□ -2.38
YGL260WP53056 snR128snR128 126 nt0.18□□□□□ -2.38
YGL260WP53056 YOR376W-AYOR376W-A 156 nt0.13□□□□□ -2.39
YGL260WP53056 PAU9YBL108C-A 129 nt0.09□□□□□ -2.4
YGL260WP53056 YKL096C-BYKL096C-B 150 nt0.08□□□□□ -2.4
YGL260WP53056 YDL114W-AYDL114W-A 114 nt0.05□□□□□ -2.4
YGL260WP53056 tV(UAC)QtV(UAC)Q 76 nt0.05□□□□□ -2.4
YGL260WP53056 tA(UGC)QtA(UGC)Q 76 nt0.02□□□□□ -2.41
YGL260WP53056 YOR316C-AYOR316C-A 210 nt0.01□□□□□ -2.41
YGL260WP53056 snR77snR77 88 nt-0.05□□□□□ -2.42
YGL260WP53056 SBH2YER019C-A 267 nt-0.05□□□□□ -2.42
Retrieved 100 of 7,029 protein–RNA pairs in 13 ms