Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 AC073210.2-201ENST00000430369 194 ntBASIC19.27■□□□□ 0.68
SLC6A12P48065 RHEB-204ENST00000472642 900 ntTSL 3 BASIC19.27■□□□□ 0.68
SLC6A12P48065 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC19.27■□□□□ 0.68
SLC6A12P48065 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SLC6A12P48065 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC19.27■□□□□ 0.68
SLC6A12P48065 AC098934.4-201ENST00000564127 592 ntBASIC19.27■□□□□ 0.68
SLC6A12P48065 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC19.27■□□□□ 0.68
SLC6A12P48065 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC19.27■□□□□ 0.68
SLC6A12P48065 AL109923.1-201ENST00000618799 583 ntBASIC19.27■□□□□ 0.68
SLC6A12P48065 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
SLC6A12P48065 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC19.27■□□□□ 0.68
SLC6A12P48065 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
SLC6A12P48065 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
SLC6A12P48065 AP001271.2-201ENST00000624018 1556 ntBASIC19.27■□□□□ 0.67
SLC6A12P48065 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
SLC6A12P48065 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
SLC6A12P48065 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC19.27■□□□□ 0.67
SLC6A12P48065 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
SLC6A12P48065 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SLC6A12P48065 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SLC6A12P48065 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC19.26■□□□□ 0.67
SLC6A12P48065 PHGDH-210ENST00000641115 1638 ntBASIC19.26■□□□□ 0.67
SLC6A12P48065 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SLC6A12P48065 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SLC6A12P48065 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC19.26■□□□□ 0.67
SLC6A12P48065 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC19.26■□□□□ 0.67
SLC6A12P48065 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SLC6A12P48065 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC19.26■□□□□ 0.67
SLC6A12P48065 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC19.26■□□□□ 0.67
SLC6A12P48065 AC005829.2-201ENST00000571422 1056 ntBASIC19.26■□□□□ 0.67
SLC6A12P48065 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC19.26■□□□□ 0.67
SLC6A12P48065 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC19.26■□□□□ 0.67
SLC6A12P48065 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SLC6A12P48065 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC19.26■□□□□ 0.67
SLC6A12P48065 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
SLC6A12P48065 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC19.25■□□□□ 0.67
SLC6A12P48065 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC19.25■□□□□ 0.67
SLC6A12P48065 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SLC6A12P48065 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SLC6A12P48065 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SLC6A12P48065 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC19.25■□□□□ 0.67
SLC6A12P48065 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SLC6A12P48065 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC19.25■□□□□ 0.67
SLC6A12P48065 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SLC6A12P48065 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC19.25■□□□□ 0.67
SLC6A12P48065 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
SLC6A12P48065 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SLC6A12P48065 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC19.25■□□□□ 0.67
SLC6A12P48065 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SLC6A12P48065 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SLC6A12P48065 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC19.25■□□□□ 0.67
SLC6A12P48065 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SLC6A12P48065 AC104771.1-201ENST00000603335 964 ntBASIC19.25■□□□□ 0.67
SLC6A12P48065 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC19.25■□□□□ 0.67
SLC6A12P48065 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
SLC6A12P48065 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
SLC6A12P48065 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SLC6A12P48065 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC19.25■□□□□ 0.67
SLC6A12P48065 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SLC6A12P48065 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC19.25■□□□□ 0.67
SLC6A12P48065 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SLC6A12P48065 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC19.25■□□□□ 0.67
SLC6A12P48065 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC19.25■□□□□ 0.67
SLC6A12P48065 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
SLC6A12P48065 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
SLC6A12P48065 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SLC6A12P48065 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SLC6A12P48065 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
SLC6A12P48065 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
SLC6A12P48065 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SLC6A12P48065 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SLC6A12P48065 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SLC6A12P48065 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC19.24■□□□□ 0.67
SLC6A12P48065 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC19.24■□□□□ 0.67
SLC6A12P48065 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
SLC6A12P48065 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC19.24■□□□□ 0.67
SLC6A12P48065 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
SLC6A12P48065 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SLC6A12P48065 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
SLC6A12P48065 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
SLC6A12P48065 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
SLC6A12P48065 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SLC6A12P48065 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
SLC6A12P48065 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
SLC6A12P48065 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SLC6A12P48065 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SLC6A12P48065 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC19.24■□□□□ 0.67
SLC6A12P48065 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC19.24■□□□□ 0.67
SLC6A12P48065 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SLC6A12P48065 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SLC6A12P48065 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC19.23■□□□□ 0.67
SLC6A12P48065 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC19.23■□□□□ 0.67
SLC6A12P48065 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SLC6A12P48065 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
SLC6A12P48065 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
SLC6A12P48065 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC19.23■□□□□ 0.67
SLC6A12P48065 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SLC6A12P48065 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC19.23■□□□□ 0.67
SLC6A12P48065 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SLC6A12P48065 GGT1-206ENST00000404223 952 ntTSL 2 BASIC19.23■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms