Protein–RNA interactions for Protein: P47082

AVT1, Vacuolar amino acid transporter 1, yeastyeast

Predictions only

Length 602 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
AVT1P47082 CDC25YLR310C 4770 nt1.47□□□□□ -2.17
AVT1P47082 tH(GUG)E1tH(GUG)E1 72 nt1.46□□□□□ -2.18
AVT1P47082 tH(GUG)E2tH(GUG)E2 72 nt1.46□□□□□ -2.18
AVT1P47082 tH(GUG)G1tH(GUG)G1 72 nt1.46□□□□□ -2.18
AVT1P47082 tH(GUG)G2tH(GUG)G2 72 nt1.46□□□□□ -2.18
AVT1P47082 tH(GUG)HtH(GUG)H 72 nt1.46□□□□□ -2.18
AVT1P47082 tH(GUG)KtH(GUG)K 72 nt1.46□□□□□ -2.18
AVT1P47082 tH(GUG)MtH(GUG)M 72 nt1.46□□□□□ -2.18
AVT1P47082 tQ(UUG)E2tQ(UUG)E2 72 nt1.46□□□□□ -2.18
AVT1P47082 MEC1YBR136W 7107 nt1.45□□□□□ -2.18
AVT1P47082 MON2YNL297C 4911 nt1.44□□□□□ -2.18
AVT1P47082 tQ(UUG)QtQ(UUG)Q 76 nt1.43□□□□□ -2.18
AVT1P47082 SWI4YER111C 3282 nt1.42□□□□□ -2.18
AVT1P47082 YNL054W-BYNL054W-B 5250 nt1.42□□□□□ -2.18
AVT1P47082 SPC110YDR356W 2835 nt1.42□□□□□ -2.18
AVT1P47082 CCH1YGR217W 6120 nt1.42□□□□□ -2.18
AVT1P47082 PMD1YER132C 5262 nt1.41□□□□□ -2.18
AVT1P47082 YGR130CYGR130C 2451 nt1.4□□□□□ -2.19
AVT1P47082 FYV8YGR196C 2454 nt1.39□□□□□ -2.19
AVT1P47082 YDL114W-AYDL114W-A 114 nt1.39□□□□□ -2.19
AVT1P47082 YER090C-AYER090C-A 90 nt1.38□□□□□ -2.19
AVT1P47082 tV(UAC)QtV(UAC)Q 76 nt1.37□□□□□ -2.19
AVT1P47082 NUP145YGL092W 3954 nt1.37□□□□□ -2.19
AVT1P47082 CDC39YCR093W 6327 nt1.36□□□□□ -2.19
AVT1P47082 YLL006W-AYLL006W-A 177 nt1.36□□□□□ -2.19
AVT1P47082 IRA1YBR140C 9279 nt1.36□□□□□ -2.19
AVT1P47082 NUP188YML103C 4968 nt1.36□□□□□ -2.19
AVT1P47082 MYO1YHR023W 5787 nt1.35□□□□□ -2.19
AVT1P47082 snR40snR40 97 nt1.33□□□□□ -2.2
AVT1P47082 LAA1YJL207C 6045 nt1.33□□□□□ -2.2
AVT1P47082 SSK2YNR031C 4740 nt1.31□□□□□ -2.2
AVT1P47082 CLU1YMR012W 3834 nt1.28□□□□□ -2.2
AVT1P47082 IML1YJR138W 4755 nt1.27□□□□□ -2.21
AVT1P47082 snR67snR67 82 nt1.26□□□□□ -2.21
AVT1P47082 HKR1YDR420W 5409 nt1.25□□□□□ -2.21
AVT1P47082 YKL106C-AYKL106C-A 120 nt1.24□□□□□ -2.21
AVT1P47082 tV(UAC)BtV(UAC)B 74 nt1.23□□□□□ -2.21
AVT1P47082 tV(UAC)DtV(UAC)D 74 nt1.23□□□□□ -2.21
AVT1P47082 BST1YFL025C 3090 nt1.22□□□□□ -2.21
AVT1P47082 FIG2YCR089W 4830 nt1.2□□□□□ -2.22
AVT1P47082 YMR160WYMR160W 2451 nt1.19□□□□□ -2.22
AVT1P47082 YNL284C-BYNL284C-B 5268 nt1.18□□□□□ -2.22
AVT1P47082 VAM6YDL077C 3150 nt1.15□□□□□ -2.23
AVT1P47082 SPT7YBR081C 3999 nt1.14□□□□□ -2.23
AVT1P47082 BEM2YER155C 6504 nt1.13□□□□□ -2.23
AVT1P47082 YPR117WYPR117W 7470 nt1.11□□□□□ -2.23
AVT1P47082 YOR192C-BYOR192C-B 5313 nt1.11□□□□□ -2.23
AVT1P47082 BUD3YCL014W 4911 nt1.1□□□□□ -2.23
AVT1P47082 RKR1YMR247C 4689 nt1.06□□□□□ -2.24
AVT1P47082 YJR029WYJR029W 5268 nt1.05□□□□□ -2.24
AVT1P47082 YPR137C-BYPR137C-B 5268 nt1.05□□□□□ -2.24
AVT1P47082 MLP2YIL149C 5040 nt1.04□□□□□ -2.24
AVT1P47082 snR77snR77 88 nt1.02□□□□□ -2.25
AVT1P47082 YOR316C-AYOR316C-A 210 nt0.97□□□□□ -2.25
AVT1P47082 PAU24YBR301W 363 nt0.97□□□□□ -2.25
AVT1P47082 SOV1YMR066W 2697 nt0.94□□□□□ -2.26
AVT1P47082 SCC2YDR180W 4482 nt0.92□□□□□ -2.26
AVT1P47082 YBL100W-BYBL100W-B 5313 nt0.92□□□□□ -2.26
AVT1P47082 SBH2YER019C-A 267 nt0.89□□□□□ -2.27
AVT1P47082 DOP1YDR141C 5097 nt0.89□□□□□ -2.27
AVT1P47082 EMT1tM(CAU)D 73 nt0.88□□□□□ -2.27
AVT1P47082 EMT5tM(CAU)J1 73 nt0.88□□□□□ -2.27
AVT1P47082 EMT3tM(CAU)J2 73 nt0.88□□□□□ -2.27
AVT1P47082 EMT4tM(CAU)M 73 nt0.88□□□□□ -2.27
AVT1P47082 EMT2tM(CAU)O2 73 nt0.88□□□□□ -2.27
AVT1P47082 LTE1YAL024C 4308 nt0.87□□□□□ -2.27
AVT1P47082 YML100W-AYML100W-A 174 nt0.85□□□□□ -2.27
AVT1P47082 tF(GAA)BtF(GAA)B 73 nt0.81□□□□□ -2.28
AVT1P47082 tF(GAA)FtF(GAA)F 73 nt0.81□□□□□ -2.28
AVT1P47082 tF(GAA)GtF(GAA)G 73 nt0.81□□□□□ -2.28
AVT1P47082 tF(GAA)H1tF(GAA)H1 73 nt0.81□□□□□ -2.28
AVT1P47082 tF(GAA)H2tF(GAA)H2 73 nt0.81□□□□□ -2.28
AVT1P47082 tF(GAA)MtF(GAA)M 73 nt0.81□□□□□ -2.28
AVT1P47082 tF(GAA)P1tF(GAA)P1 73 nt0.81□□□□□ -2.28
AVT1P47082 tF(GAA)P2tF(GAA)P2 73 nt0.81□□□□□ -2.28
AVT1P47082 THO2YNL139C 4794 nt0.78□□□□□ -2.28
AVT1P47082 tT(AGU)BtT(AGU)B 73 nt0.78□□□□□ -2.28
AVT1P47082 tT(AGU)CtT(AGU)C 73 nt0.78□□□□□ -2.28
AVT1P47082 tT(AGU)DtT(AGU)D 73 nt0.78□□□□□ -2.28
AVT1P47082 tT(AGU)HtT(AGU)H 73 nt0.78□□□□□ -2.28
AVT1P47082 tT(AGU)I1tT(AGU)I1 73 nt0.78□□□□□ -2.28
AVT1P47082 tT(AGU)I2tT(AGU)I2 73 nt0.78□□□□□ -2.28
AVT1P47082 tT(AGU)JtT(AGU)J 73 nt0.78□□□□□ -2.28
AVT1P47082 tT(AGU)N1tT(AGU)N1 73 nt0.78□□□□□ -2.28
AVT1P47082 tT(AGU)N2tT(AGU)N2 73 nt0.78□□□□□ -2.28
AVT1P47082 tT(AGU)O1tT(AGU)O1 73 nt0.78□□□□□ -2.28
AVT1P47082 tT(AGU)O2tT(AGU)O2 73 nt0.78□□□□□ -2.28
AVT1P47082 ESP1YGR098C 4893 nt0.67□□□□□ -2.3
AVT1P47082 MLP1YKR095W 5628 nt0.67□□□□□ -2.3
AVT1P47082 YKL145W-AYKL145W-A 93 nt0.66□□□□□ -2.3
AVT1P47082 YOR186C-AYOR186C-A 210 nt0.66□□□□□ -2.3
AVT1P47082 YOL014WYOL014W 375 nt0.63□□□□□ -2.31
AVT1P47082 IQG1YPL242C 4488 nt0.62□□□□□ -2.31
AVT1P47082 UTP20YBL004W 7482 nt0.61□□□□□ -2.31
AVT1P47082 YMR272W-AYMR272W-A 114 nt0.58□□□□□ -2.32
AVT1P47082 YPR159C-AYPR159C-A 102 nt0.57□□□□□ -2.32
AVT1P47082 FMP27YLR454W 7887 nt0.57□□□□□ -2.32
AVT1P47082 PAU9YBL108C-A 129 nt0.56□□□□□ -2.32
AVT1P47082 tC(GCA)QtC(GCA)Q 76 nt0.54□□□□□ -2.32
AVT1P47082 YJL113WYJL113W 4647 nt0.53□□□□□ -2.32
Retrieved 100 of 7,029 protein–RNA pairs in 12.3 ms