Protein–RNA interactions for Protein: P43562

YFL040W, Probable metabolite transport protein YFL040W, yeastyeast

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
YFL040WP43562 YOR381W-AYOR381W-A 168 nt-0.3□□□□□ -2.46
YFL040WP43562 YNR077CYNR077C 255 nt-0.33□□□□□ -2.46
YFL040WP43562 YOR302WYOR302W 78 nt-0.33□□□□□ -2.46
YFL040WP43562 YOR170WYOR170W 306 nt-0.34□□□□□ -2.46
YFL040WP43562 YJL077W-AYJL077W-A 87 nt-0.35□□□□□ -2.47
YFL040WP43562 tQ(UUG)QtQ(UUG)Q 76 nt-0.37□□□□□ -2.47
YFL040WP43562 SEC10YLR166C 2616 nt-0.38□□□□□ -2.47
YFL040WP43562 snR39BsnR39B 96 nt-0.38□□□□□ -2.47
YFL040WP43562 snR52snR52 92 nt-0.42□□□□□ -2.48
YFL040WP43562 YIL071W-AYIL071W-A 477 nt-0.43□□□□□ -2.48
YFL040WP43562 YLR342W-AYLR342W-A 174 nt-0.44□□□□□ -2.48
YFL040WP43562 YGR146C-AYGR146C-A 162 nt-0.46□□□□□ -2.48
YFL040WP43562 YML100W-AYML100W-A 174 nt-0.46□□□□□ -2.48
YFL040WP43562 YOR329W-AYOR329W-A 210 nt-0.46□□□□□ -2.48
YFL040WP43562 snR80snR80 171 nt-0.47□□□□□ -2.48
YFL040WP43562 snR69snR69 101 nt-0.48□□□□□ -2.49
YFL040WP43562 PAU9YBL108C-A 129 nt-0.49□□□□□ -2.49
YFL040WP43562 Q0142Q0142 177 nt-0.51□□□□□ -2.49
YFL040WP43562 YDL007C-AYDL007C-A 258 nt-0.52□□□□□ -2.49
YFL040WP43562 PMP2YEL017C-A 132 nt-0.55□□□□□ -2.5
YFL040WP43562 RDS3YPR094W 324 nt-0.55□□□□□ -2.5
YFL040WP43562 URB1YKL014C 5295 nt-0.55□□□□□ -2.5
YFL040WP43562 snR48snR48 113 nt-0.57□□□□□ -2.5
YFL040WP43562 YHL009W-BYHL009W-B 5409 nt-0.57□□□□□ -2.5
YFL040WP43562 YDR406W-AYDR406W-A 246 nt-0.58□□□□□ -2.5
YFL040WP43562 tA(UGC)QtA(UGC)Q 76 nt-0.59□□□□□ -2.5
YFL040WP43562 YHL015W-AYHL015W-A 84 nt-0.6□□□□□ -2.51
YFL040WP43562 YNL067W-BYNL067W-B 141 nt-0.6□□□□□ -2.51
YFL040WP43562 YER090C-AYER090C-A 90 nt-0.62□□□□□ -2.51
YFL040WP43562 tT(UGU)G1tT(UGU)G1 72 nt-0.62□□□□□ -2.51
YFL040WP43562 tT(UGU)G2tT(UGU)G2 72 nt-0.62□□□□□ -2.51
YFL040WP43562 tT(UGU)PtT(UGU)P 72 nt-0.62□□□□□ -2.51
YFL040WP43562 YOR102WYOR102W 351 nt-0.64□□□□□ -2.51
YFL040WP43562 snR50snR50 90 nt-0.64□□□□□ -2.51
YFL040WP43562 tL(UAA)QtL(UAA)Q 85 nt-0.65□□□□□ -2.51
YFL040WP43562 YNL205CYNL205C 423 nt-0.65□□□□□ -2.51
YFL040WP43562 YNL266WYNL266W 420 nt-0.66□□□□□ -2.52
YFL040WP43562 tD(GUC)QtD(GUC)Q 75 nt-0.67□□□□□ -2.52
YFL040WP43562 snR33snR33 183 nt-0.69□□□□□ -2.52
YFL040WP43562 JLP2YMR132C 627 nt-0.71□□□□□ -2.52
YFL040WP43562 YBR178WYBR178W 375 nt-0.71□□□□□ -2.52
YFL040WP43562 YLR286W-AYLR286W-A 135 nt-0.72□□□□□ -2.52
YFL040WP43562 snR161snR161 161 nt-0.73□□□□□ -2.53
YFL040WP43562 YDL159C-BYDL159C-B 177 nt-0.77□□□□□ -2.53
YFL040WP43562 snR67snR67 82 nt-0.79□□□□□ -2.54
YFL040WP43562 YMR046W-AYMR046W-A 129 nt-0.84□□□□□ -2.54
YFL040WP43562 YJL150WYJL150W 303 nt-0.85□□□□□ -2.55
YFL040WP43562 YNL198CYNL198C 303 nt-0.86□□□□□ -2.55
YFL040WP43562 YBR196C-AYBR196C-A 150 nt-0.88□□□□□ -2.55
YFL040WP43562 YLR299C-AYLR299C-A 93 nt-0.9□□□□□ -2.55
YFL040WP43562 YBR223W-AYBR223W-A 120 nt-0.91□□□□□ -2.56
YFL040WP43562 SPG3YDR504C 384 nt-0.94□□□□□ -2.56
YFL040WP43562 YBL053WYBL053W 375 nt-0.95□□□□□ -2.56
YFL040WP43562 SKI7YOR076C 2244 nt-0.95□□□□□ -2.56
YFL040WP43562 SOM1YEL059C-A 225 nt-0.97□□□□□ -2.56
YFL040WP43562 tM(CAU)Q1tM(CAU)Q1 76 nt-1.02□□□□□ -2.57
YFL040WP43562 tP(UGG)QtP(UGG)Q 72 nt-1.05□□□□□ -2.58
YFL040WP43562 YCR095W-AYCR095W-A 159 nt-1.06□□□□□ -2.58
YFL040WP43562 YHR180C-BYHR180C-B 105 nt-1.13□□□□□ -2.59
YFL040WP43562 YML054C-AYML054C-A 159 nt-1.14□□□□□ -2.59
YFL040WP43562 YGR151CYGR151C 336 nt-1.19□□□□□ -2.6
YFL040WP43562 YLR466C-BYLR466C-B 117 nt-1.19□□□□□ -2.6
YFL040WP43562 YNL338WYNL338W 159 nt-1.27□□□□□ -2.61
YFL040WP43562 tY(GUA)QtY(GUA)Q 84 nt-1.3□□□□□ -2.62
YFL040WP43562 YCL001W-BYCL001W-B 255 nt-1.34□□□□□ -2.62
YFL040WP43562 YGR240C-AYGR240C-A 201 nt-1.36□□□□□ -2.63
YFL040WP43562 CDC65tQ(CUG)M 72 nt-1.37□□□□□ -2.63
YFL040WP43562 YOR376W-AYOR376W-A 156 nt-1.38□□□□□ -2.63
YFL040WP43562 YOL083C-AYOL083C-A 141 nt-1.39□□□□□ -2.63
YFL040WP43562 snR77snR77 88 nt-1.4□□□□□ -2.63
YFL040WP43562 RPL41AYDL184C 78 nt-1.43□□□□□ -2.64
YFL040WP43562 YKL106C-AYKL106C-A 120 nt-1.45□□□□□ -2.64
YFL040WP43562 YNL337WYNL337W 255 nt-1.45□□□□□ -2.64
YFL040WP43562 YBR296C-AYBR296C-A 120 nt-1.46□□□□□ -2.64
YFL040WP43562 YBL071C-BYBL071C-B 99 nt-1.49□□□□□ -2.65
YFL040WP43562 YBR109W-AYBR109W-A 225 nt-1.5□□□□□ -2.65
YFL040WP43562 YOR316C-AYOR316C-A 210 nt-1.51□□□□□ -2.65
YFL040WP43562 YOL164W-AYOL164W-A 183 nt-1.54□□□□□ -2.66
YFL040WP43562 YBL100W-CYBL100W-C 120 nt-1.55□□□□□ -2.66
YFL040WP43562 snR81snR81 201 nt-1.56□□□□□ -2.66
YFL040WP43562 YAL037C-AYAL037C-A 93 nt-1.56□□□□□ -2.66
YFL040WP43562 YMR315W-AYMR315W-A 108 nt-1.57□□□□□ -2.66
YFL040WP43562 Q0032Q0032 291 nt-1.59□□□□□ -2.66
YFL040WP43562 snR38snR38 95 nt-1.62□□□□□ -2.67
YFL040WP43562 snR47snR47 99 nt-1.62□□□□□ -2.67
YFL040WP43562 YBR126W-BYBR126W-B 144 nt-1.64□□□□□ -2.67
YFL040WP43562 YGL007C-AYGL007C-A 87 nt-1.71□□□□□ -2.68
YFL040WP43562 YOL166W-AYOL166W-A 156 nt-1.76□□□□□ -2.69
YFL040WP43562 YOR309CYOR309C 381 nt-1.84□□□□□ -2.7
YFL040WP43562 YGL041C-BYGL041C-B 183 nt-1.89□□□□□ -2.71
YFL040WP43562 tS(GCU)Q1tS(GCU)Q1 86 nt-1.91□□□□□ -2.72
YFL040WP43562 YKL225WYKL225W 348 nt-1.93□□□□□ -2.72
YFL040WP43562 YNL103W-AYNL103W-A 90 nt-1.95□□□□□ -2.72
YFL040WP43562 snR61snR61 90 nt-1.96□□□□□ -2.72
YFL040WP43562 YLR294CYLR294C 330 nt-2.01□□□□□ -2.73
YFL040WP43562 snR6snR6 112 nt-2.03□□□□□ -2.73
YFL040WP43562 YOR225WYOR225W 330 nt-2.04□□□□□ -2.74
YFL040WP43562 YDR034C-AYDR034C-A 177 nt-2.06□□□□□ -2.74
YFL040WP43562 YDR543CYDR543C 300 nt-2.06□□□□□ -2.74
YFL040WP43562 YNL170WYNL170W 396 nt-2.09□□□□□ -2.74
Retrieved 100 of 7,029 protein–RNA pairs in 7.9 ms