Protein–RNA interactions for Protein: P42939

MVB12, Multivesicular body sorting factor 12, yeastyeast

Predictions only

Length 101 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MVB12P42939 YOR008C-AYOR008C-A 225 nt-1.21□□□□□ -2.6
MVB12P42939 YGR146C-AYGR146C-A 162 nt-1.22□□□□□ -2.6
MVB12P42939 YBR223W-AYBR223W-A 120 nt-1.22□□□□□ -2.6
MVB12P42939 tD(GUC)QtD(GUC)Q 75 nt-1.24□□□□□ -2.61
MVB12P42939 YOR329W-AYOR329W-A 210 nt-1.24□□□□□ -2.61
MVB12P42939 YBR178WYBR178W 375 nt-1.25□□□□□ -2.61
MVB12P42939 YLR286W-AYLR286W-A 135 nt-1.26□□□□□ -2.61
MVB12P42939 YPL038W-AYPL038W-A 192 nt-1.28□□□□□ -2.61
MVB12P42939 YPR197CYPR197C 564 nt-1.3□□□□□ -2.62
MVB12P42939 tF(GAA)QtF(GAA)Q 75 nt-1.31□□□□□ -2.62
MVB12P42939 YDL159C-BYDL159C-B 177 nt-1.32□□□□□ -2.62
MVB12P42939 YML054C-AYML054C-A 159 nt-1.33□□□□□ -2.62
MVB12P42939 YNL205CYNL205C 423 nt-1.33□□□□□ -2.62
MVB12P42939 YDR157WYDR157W 402 nt-1.35□□□□□ -2.63
MVB12P42939 YDR413CYDR413C 576 nt-1.35□□□□□ -2.63
MVB12P42939 CDC65tQ(CUG)M 72 nt-1.37□□□□□ -2.63
MVB12P42939 YER181CYER181C 324 nt-1.38□□□□□ -2.63
MVB12P42939 tY(GUA)QtY(GUA)Q 84 nt-1.38□□□□□ -2.63
MVB12P42939 snR77snR77 88 nt-1.39□□□□□ -2.63
MVB12P42939 YNL277W-AYNL277W-A 189 nt-1.4□□□□□ -2.63
MVB12P42939 snR55snR55 98 nt-1.41□□□□□ -2.64
MVB12P42939 RPL39YJL189W 156 nt-1.42□□□□□ -2.64
MVB12P42939 YLR222C-AYLR222C-A 231 nt-1.42□□□□□ -2.64
MVB12P42939 YGR240C-AYGR240C-A 201 nt-1.43□□□□□ -2.64
MVB12P42939 YNL097C-BYNL097C-B 123 nt-1.45□□□□□ -2.64
MVB12P42939 Q0017Q0017 162 nt-1.45□□□□□ -2.64
MVB12P42939 YDL240C-AYDL240C-A 138 nt-1.46□□□□□ -2.64
MVB12P42939 YKL118WYKL118W 312 nt-1.47□□□□□ -2.64
MVB12P42939 YMR315W-AYMR315W-A 108 nt-1.47□□□□□ -2.64
MVB12P42939 snR81snR81 201 nt-1.48□□□□□ -2.65
MVB12P42939 YLR299C-AYLR299C-A 93 nt-1.48□□□□□ -2.65
MVB12P42939 YGL188C-AYGL188C-A 141 nt-1.5□□□□□ -2.65
MVB12P42939 YDR118W-AYDR118W-A 117 nt-1.52□□□□□ -2.65
MVB12P42939 tL(UAA)QtL(UAA)Q 85 nt-1.52□□□□□ -2.65
MVB12P42939 YOR102WYOR102W 351 nt-1.53□□□□□ -2.65
MVB12P42939 YOR302WYOR302W 78 nt-1.54□□□□□ -2.66
MVB12P42939 YBR196C-AYBR196C-A 150 nt-1.54□□□□□ -2.66
MVB12P42939 snR48snR48 113 nt-1.55□□□□□ -2.66
MVB12P42939 snR52snR52 92 nt-1.55□□□□□ -2.66
MVB12P42939 YOL155W-AYOL155W-A 135 nt-1.56□□□□□ -2.66
MVB12P42939 YOR376W-AYOR376W-A 156 nt-1.56□□□□□ -2.66
MVB12P42939 VAR1Q0140 1197 nt-1.59□□□□□ -2.66
MVB12P42939 YNR077CYNR077C 255 nt-1.59□□□□□ -2.66
MVB12P42939 GIM4YEL003W 336 nt-1.6□□□□□ -2.67
MVB12P42939 YHL015W-AYHL015W-A 84 nt-1.64□□□□□ -2.67
MVB12P42939 YLR342W-AYLR342W-A 174 nt-1.66□□□□□ -2.68
MVB12P42939 YHR180C-BYHR180C-B 105 nt-1.67□□□□□ -2.68
MVB12P42939 YPL152W-AYPL152W-A 99 nt-1.69□□□□□ -2.68
MVB12P42939 YPR012WYPR012W 255 nt-1.69□□□□□ -2.68
MVB12P42939 YOR309CYOR309C 381 nt-1.75□□□□□ -2.69
MVB12P42939 snR65snR65 100 nt-1.78□□□□□ -2.69
MVB12P42939 YKL106C-AYKL106C-A 120 nt-1.78□□□□□ -2.69
MVB12P42939 YOR316C-AYOR316C-A 210 nt-1.78□□□□□ -2.69
MVB12P42939 YJL150WYJL150W 303 nt-1.79□□□□□ -2.7
MVB12P42939 snR80snR80 171 nt-1.83□□□□□ -2.7
MVB12P42939 YNL198CYNL198C 303 nt-1.84□□□□□ -2.7
MVB12P42939 SOM1YEL059C-A 225 nt-1.89□□□□□ -2.71
MVB12P42939 YBL053WYBL053W 375 nt-1.9□□□□□ -2.71
MVB12P42939 YBR109W-AYBR109W-A 225 nt-1.93□□□□□ -2.72
MVB12P42939 RPL41AYDL184C 78 nt-1.96□□□□□ -2.72
MVB12P42939 YBR296C-AYBR296C-A 120 nt-1.96□□□□□ -2.72
MVB12P42939 YBR126W-BYBR126W-B 144 nt-1.98□□□□□ -2.73
MVB12P42939 snR56snR56 88 nt-1.99□□□□□ -2.73
MVB12P42939 YDR406W-AYDR406W-A 246 nt-1.99□□□□□ -2.73
MVB12P42939 YHR175W-AYHR175W-A 150 nt-2□□□□□ -2.73
MVB12P42939 YOR231C-AYOR231C-A 201 nt-2.01□□□□□ -2.73
MVB12P42939 snR38snR38 95 nt-2.04□□□□□ -2.74
MVB12P42939 YDR524W-CYDR524W-C 90 nt-2.05□□□□□ -2.74
MVB12P42939 YCR095W-AYCR095W-A 159 nt-2.06□□□□□ -2.74
MVB12P42939 YOL083C-AYOL083C-A 141 nt-2.06□□□□□ -2.74
MVB12P42939 Q0144Q0144 330 nt-2.08□□□□□ -2.74
MVB12P42939 snR6snR6 112 nt-2.1□□□□□ -2.75
MVB12P42939 tR(ACG)Q2tR(ACG)Q2 74 nt-2.1□□□□□ -2.75
MVB12P42939 YGR151CYGR151C 336 nt-2.11□□□□□ -2.75
MVB12P42939 YBL071C-BYBL071C-B 99 nt-2.12□□□□□ -2.75
MVB12P42939 YOL164W-AYOL164W-A 183 nt-2.17□□□□□ -2.76
MVB12P42939 YOR335W-AYOR335W-A 81 nt-2.17□□□□□ -2.76
MVB12P42939 snR47snR47 99 nt-2.19□□□□□ -2.76
MVB12P42939 snR73snR73 106 nt-2.21□□□□□ -2.76
MVB12P42939 RPL41BYDL133C-A 78 nt-2.25□□□□□ -2.77
MVB12P42939 YAL037C-AYAL037C-A 93 nt-2.35□□□□□ -2.79
MVB12P42939 YBL100W-CYBL100W-C 120 nt-2.35□□□□□ -2.79
MVB12P42939 YCL001W-BYCL001W-B 255 nt-2.35□□□□□ -2.79
MVB12P42939 tS(GCU)Q1tS(GCU)Q1 86 nt-2.4□□□□□ -2.79
MVB12P42939 YDL114W-AYDL114W-A 114 nt-2.42□□□□□ -2.8
MVB12P42939 YKL225WYKL225W 348 nt-2.44□□□□□ -2.8
MVB12P42939 tV(UAC)QtV(UAC)Q 76 nt-2.46□□□□□ -2.8
MVB12P42939 SPG3YDR504C 384 nt-2.47□□□□□ -2.8
MVB12P42939 YMR046W-AYMR046W-A 129 nt-2.47□□□□□ -2.8
MVB12P42939 snR85snR85 171 nt-2.48□□□□□ -2.81
MVB12P42939 YDR524C-AYDR524C-A 120 nt-2.57□□□□□ -2.82
MVB12P42939 YNL337WYNL337W 255 nt-2.58□□□□□ -2.82
MVB12P42939 YLR466C-BYLR466C-B 117 nt-2.61□□□□□ -2.83
MVB12P42939 YNL338WYNL338W 159 nt-2.63□□□□□ -2.83
MVB12P42939 YDL159W-AYDL159W-A 132 nt-2.69□□□□□ -2.84
MVB12P42939 YGR122C-AYGR122C-A 129 nt-2.72□□□□□ -2.84
MVB12P42939 YDR034C-AYDR034C-A 177 nt-2.73□□□□□ -2.85
MVB12P42939 tM(CAU)Q1tM(CAU)Q1 76 nt-2.76□□□□□ -2.85
MVB12P42939 YGL041C-BYGL041C-B 183 nt-2.77□□□□□ -2.85
MVB12P42939 YDR543CYDR543C 300 nt-2.81□□□□□ -2.86
Retrieved 100 of 7,029 protein–RNA pairs in 56.9 ms