Protein–RNA interactions for Protein: P41807

VMA13, V-type proton ATPase subunit H, yeast

Known RBP Predictions only

Length 478 aa.

Protein		RNA				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	UniProt Accession	Gene	Ensembl Transcript ID	Length	Transcript Status	Prediction Score	Prediction z-Score	Detected Interaction
VMA13	P41807	snR39B	snR39B	96 nt		0.2	□□□□□ -2.38
VMA13	P41807	YBR099C	YBR099C	384 nt		0.19	□□□□□ -2.38
VMA13	P41807	YOR329W-A	YOR329W-A	210 nt		0.17	□□□□□ -2.38
VMA13	P41807	YNL054W-B	YNL054W-B	5250 nt		0.15	□□□□□ -2.38
VMA13	P41807	YOR102W	YOR102W	351 nt		0.13	□□□□□ -2.39
VMA13	P41807	YJL150W	YJL150W	303 nt		0.12	□□□□□ -2.39
VMA13	P41807	EST1	YLR233C	2100 nt		0.12	□□□□□ -2.39
VMA13	P41807	RPM2	YML091C	3609 nt		0.12	□□□□□ -2.39
VMA13	P41807	snR48	snR48	113 nt		0.1	□□□□□ -2.39
VMA13	P41807	ESP1	YGR098C	4893 nt		0.09	□□□□□ -2.39
VMA13	P41807	YGR146C-A	YGR146C-A	162 nt		0.08	□□□□□ -2.4
VMA13	P41807	snR128	snR128	126 nt		0.06	□□□□□ -2.4
VMA13	P41807	YJL077W-A	YJL077W-A	87 nt		0.05	□□□□□ -2.4
VMA13	P41807	YNL067W-B	YNL067W-B	141 nt		0.05	□□□□□ -2.4
VMA13	P41807	YDL007C-A	YDL007C-A	258 nt		0.03	□□□□□ -2.4
VMA13	P41807	snR45	snR45	172 nt		0.03	□□□□□ -2.4
VMA13	P41807	tL(UAA)Q	tL(UAA)Q	85 nt		0.01	□□□□□ -2.41
VMA13	P41807	tQ(UUG)Q	tQ(UUG)Q	76 nt		0.01	□□□□□ -2.41
VMA13	P41807	YGR151C	YGR151C	336 nt		0	□□□□□ -2.41
VMA13	P41807	YLR466C-B	YLR466C-B	117 nt		-0.01	□□□□□ -2.41
VMA13	P41807	YNL198C	YNL198C	303 nt		-0.01	□□□□□ -2.41
VMA13	P41807	YNL337W	YNL337W	255 nt		-0.02	□□□□□ -2.41
VMA13	P41807	snR69	snR69	101 nt		-0.04	□□□□□ -2.42
VMA13	P41807	SOV1	YMR066W	2697 nt		-0.04	□□□□□ -2.42
VMA13	P41807	YNL205C	YNL205C	423 nt		-0.05	□□□□□ -2.42
VMA13	P41807	PMP2	YEL017C-A	132 nt		-0.06	□□□□□ -2.42
VMA13	P41807	YGR164W	YGR164W	336 nt		-0.08	□□□□□ -2.42
VMA13	P41807	RDS3	YPR094W	324 nt		-0.11	□□□□□ -2.43
VMA13	P41807	YNL338W	YNL338W	159 nt		-0.12	□□□□□ -2.43
VMA13	P41807	YBL053W	YBL053W	375 nt		-0.14	□□□□□ -2.43
VMA13	P41807	SEC10	YLR166C	2616 nt		-0.16	□□□□□ -2.44
VMA13	P41807	TFB5	YDR079C-A	219 nt		-0.17	□□□□□ -2.44
VMA13	P41807	tD(GUC)Q	tD(GUC)Q	75 nt		-0.17	□□□□□ -2.44
VMA13	P41807	SBH2	YER019C-A	267 nt		-0.19	□□□□□ -2.44
VMA13	P41807	SOM1	YEL059C-A	225 nt		-0.2	□□□□□ -2.44
VMA13	P41807	YBR178W	YBR178W	375 nt		-0.2	□□□□□ -2.44
VMA13	P41807	Q0032	Q0032	291 nt		-0.22	□□□□□ -2.44
VMA13	P41807	YER090C-A	YER090C-A	90 nt		-0.24	□□□□□ -2.45
VMA13	P41807	YCR095W-A	YCR095W-A	159 nt		-0.25	□□□□□ -2.45
VMA13	P41807	YNL266W	YNL266W	420 nt		-0.25	□□□□□ -2.45
VMA13	P41807	YIL071W-A	YIL071W-A	477 nt		-0.26	□□□□□ -2.45
VMA13	P41807	YLR286W-A	YLR286W-A	135 nt		-0.26	□□□□□ -2.45
VMA13	P41807	YBR196C-A	YBR196C-A	150 nt		-0.27	□□□□□ -2.45
VMA13	P41807	YDL159C-B	YDL159C-B	177 nt		-0.28	□□□□□ -2.45
VMA13	P41807	PAU9	YBL108C-A	129 nt		-0.28	□□□□□ -2.45
VMA13	P41807	snR50	snR50	90 nt		-0.28	□□□□□ -2.45
VMA13	P41807	YML100W-A	YML100W-A	174 nt		-0.3	□□□□□ -2.46
VMA13	P41807	YGL007C-A	YGL007C-A	87 nt		-0.33	□□□□□ -2.46
VMA13	P41807	YPL060C-A	YPL060C-A	3315 nt		-0.35	□□□□□ -2.47
VMA13	P41807	YLR299C-A	YLR299C-A	93 nt		-0.37	□□□□□ -2.47
VMA13	P41807	snR67	snR67	82 nt		-0.4	□□□□□ -2.47
VMA13	P41807	YCL001W-B	YCL001W-B	255 nt		-0.42	□□□□□ -2.48
VMA13	P41807	tA(UGC)Q	tA(UGC)Q	76 nt		-0.48	□□□□□ -2.49
VMA13	P41807	URB1	YKL014C	5295 nt		-0.54	□□□□□ -2.5
VMA13	P41807	YLR294C	YLR294C	330 nt		-0.54	□□□□□ -2.5
VMA13	P41807	YHR180C-B	YHR180C-B	105 nt		-0.58	□□□□□ -2.5
VMA13	P41807	YOR225W	YOR225W	330 nt		-0.58	□□□□□ -2.5
VMA13	P41807	tT(UGU)G1	tT(UGU)G1	72 nt		-0.59	□□□□□ -2.5
VMA13	P41807	tT(UGU)G2	tT(UGU)G2	72 nt		-0.59	□□□□□ -2.5
VMA13	P41807	tT(UGU)P	tT(UGU)P	72 nt		-0.59	□□□□□ -2.5
VMA13	P41807	YML054C-A	YML054C-A	159 nt		-0.62	□□□□□ -2.51
VMA13	P41807	YJL113W	YJL113W	4647 nt		-0.63	□□□□□ -2.51
VMA13	P41807	snR161	snR161	161 nt		-0.64	□□□□□ -2.51
VMA13	P41807	YOL083C-A	YOL083C-A	141 nt		-0.67	□□□□□ -2.52
VMA13	P41807	snR33	snR33	183 nt		-0.69	□□□□□ -2.52
VMA13	P41807	SKI7	YOR076C	2244 nt		-0.69	□□□□□ -2.52
VMA13	P41807	YAL037C-A	YAL037C-A	93 nt		-0.77	□□□□□ -2.53
VMA13	P41807	YNL170W	YNL170W	396 nt		-0.77	□□□□□ -2.53
VMA13	P41807	YBL100W-C	YBL100W-C	120 nt		-0.8	□□□□□ -2.54
VMA13	P41807	YBL071C-B	YBL071C-B	99 nt		-0.81	□□□□□ -2.54
VMA13	P41807	RPL41A	YDL184C	78 nt		-0.84	□□□□□ -2.54
VMA13	P41807	YOL164W-A	YOL164W-A	183 nt		-0.85	□□□□□ -2.55
VMA13	P41807	YBR296C-A	YBR296C-A	120 nt		-0.88	□□□□□ -2.55
VMA13	P41807	snR81	snR81	201 nt		-0.89	□□□□□ -2.55
VMA13	P41807	YBR223W-A	YBR223W-A	120 nt		-0.9	□□□□□ -2.55
VMA13	P41807	ATP8	Q0080	147 nt		-0.91	□□□□□ -2.56
VMA13	P41807	snR47	snR47	99 nt		-0.93	□□□□□ -2.56
VMA13	P41807	YHL009W-B	YHL009W-B	5409 nt		-0.95	□□□□□ -2.56
VMA13	P41807	YGL041C-B	YGL041C-B	183 nt		-0.95	□□□□□ -2.56
VMA13	P41807	YNL103W-A	YNL103W-A	90 nt		-0.95	□□□□□ -2.56
VMA13	P41807	snR61	snR61	90 nt		-0.96	□□□□□ -2.56
VMA13	P41807	YBR109W-A	YBR109W-A	225 nt		-0.96	□□□□□ -2.56
VMA13	P41807	YGR240C-A	YGR240C-A	201 nt		-0.97	□□□□□ -2.56
VMA13	P41807	tP(UGG)Q	tP(UGG)Q	72 nt		-0.98	□□□□□ -2.57
VMA13	P41807	YNR077C	YNR077C	255 nt		-0.98	□□□□□ -2.57
VMA13	P41807	YKL106C-A	YKL106C-A	120 nt		-1	□□□□□ -2.57
VMA13	P41807	YOR376W-A	YOR376W-A	156 nt		-1.06	□□□□□ -2.58
VMA13	P41807	Q0092	Q0092	141 nt		-1.11	□□□□□ -2.59
VMA13	P41807	snR38	snR38	95 nt		-1.14	□□□□□ -2.59
VMA13	P41807	tS(GCU)Q1	tS(GCU)Q1	86 nt		-1.18	□□□□□ -2.6
VMA13	P41807	YOR316C-A	YOR316C-A	210 nt		-1.18	□□□□□ -2.6
VMA13	P41807	YDR034C-A	YDR034C-A	177 nt		-1.25	□□□□□ -2.61
VMA13	P41807	YKL225W	YKL225W	348 nt		-1.25	□□□□□ -2.61
VMA13	P41807	snR62	snR62	100 nt		-1.29	□□□□□ -2.62
VMA13	P41807	Q0143	Q0143	153 nt		-1.3	□□□□□ -2.62
VMA13	P41807	tY(GUA)Q	tY(GUA)Q	84 nt		-1.3	□□□□□ -2.62
VMA13	P41807	CDC65	tQ(CUG)M	72 nt		-1.34	□□□□□ -2.62
VMA13	P41807	snR77	snR77	88 nt		-1.35	□□□□□ -2.63
VMA13	P41807	YMR326C	YMR326C	309 nt		-1.4	□□□□□ -2.63
VMA13	P41807	YMR315W-A	YMR315W-A	108 nt		-1.43	□□□□□ -2.64

Retrieved 100 of 7,029 protein–RNA pairs in 8.3 ms