Protein–RNA interactions for Protein: P40552

TIR3, Cell wall protein TIR3, yeastyeast

Predictions only

Length 269 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TIR3P40552 YOR170WYOR170W 306 nt-0.55□□□□□ -2.5
TIR3P40552 snR69snR69 101 nt-0.56□□□□□ -2.5
TIR3P40552 tM(CAU)Q2tM(CAU)Q2 78 nt-0.56□□□□□ -2.5
TIR3P40552 tQ(UUG)QtQ(UUG)Q 76 nt-0.56□□□□□ -2.5
TIR3P40552 tA(UGC)QtA(UGC)Q 76 nt-0.57□□□□□ -2.5
TIR3P40552 YPL152W-AYPL152W-A 99 nt-0.57□□□□□ -2.5
TIR3P40552 URB1YKL014C 5295 nt-0.58□□□□□ -2.5
TIR3P40552 PAU9YBL108C-A 129 nt-0.59□□□□□ -2.5
TIR3P40552 YOL155W-AYOL155W-A 135 nt-0.59□□□□□ -2.5
TIR3P40552 YOR302WYOR302W 78 nt-0.6□□□□□ -2.51
TIR3P40552 YGR146C-AYGR146C-A 162 nt-0.63□□□□□ -2.51
TIR3P40552 YOR329W-AYOR329W-A 210 nt-0.63□□□□□ -2.51
TIR3P40552 snR39BsnR39B 96 nt-0.63□□□□□ -2.51
TIR3P40552 PMP2YEL017C-A 132 nt-0.67□□□□□ -2.52
TIR3P40552 YER090C-AYER090C-A 90 nt-0.67□□□□□ -2.52
TIR3P40552 YNL266WYNL266W 420 nt-0.67□□□□□ -2.52
TIR3P40552 RDS3YPR094W 324 nt-0.67□□□□□ -2.52
TIR3P40552 snR50snR50 90 nt-0.67□□□□□ -2.52
TIR3P40552 YGL188C-AYGL188C-A 141 nt-0.71□□□□□ -2.52
TIR3P40552 YOR231C-AYOR231C-A 201 nt-0.71□□□□□ -2.52
TIR3P40552 YDR524W-CYDR524W-C 90 nt-0.72□□□□□ -2.52
TIR3P40552 JLP2YMR132C 627 nt-0.74□□□□□ -2.53
TIR3P40552 YJL113WYJL113W 4647 nt-0.76□□□□□ -2.53
TIR3P40552 snR80snR80 171 nt-0.77□□□□□ -2.53
TIR3P40552 snR33snR33 183 nt-0.77□□□□□ -2.53
TIR3P40552 snR52snR52 92 nt-0.77□□□□□ -2.53
TIR3P40552 snR48snR48 113 nt-0.78□□□□□ -2.53
TIR3P40552 tD(GUC)QtD(GUC)Q 75 nt-0.79□□□□□ -2.54
TIR3P40552 tL(UAA)QtL(UAA)Q 85 nt-0.8□□□□□ -2.54
TIR3P40552 YBR178WYBR178W 375 nt-0.81□□□□□ -2.54
TIR3P40552 YLR286W-AYLR286W-A 135 nt-0.82□□□□□ -2.54
TIR3P40552 YNL205CYNL205C 423 nt-0.82□□□□□ -2.54
TIR3P40552 YLR342W-AYLR342W-A 174 nt-0.83□□□□□ -2.54
TIR3P40552 snR67snR67 82 nt-0.85□□□□□ -2.55
TIR3P40552 YHL009W-BYHL009W-B 5409 nt-0.86□□□□□ -2.55
TIR3P40552 YDL159C-BYDL159C-B 177 nt-0.88□□□□□ -2.55
TIR3P40552 YHL015W-AYHL015W-A 84 nt-0.88□□□□□ -2.55
TIR3P40552 tT(UGU)G1tT(UGU)G1 72 nt-0.88□□□□□ -2.55
TIR3P40552 tT(UGU)G2tT(UGU)G2 72 nt-0.88□□□□□ -2.55
TIR3P40552 tT(UGU)PtT(UGU)P 72 nt-0.88□□□□□ -2.55
TIR3P40552 YOR102WYOR102W 351 nt-0.9□□□□□ -2.55
TIR3P40552 SKI7YOR076C 2244 nt-0.91□□□□□ -2.56
TIR3P40552 snR161snR161 161 nt-0.94□□□□□ -2.56
TIR3P40552 YDR406W-AYDR406W-A 246 nt-1□□□□□ -2.57
TIR3P40552 YLR299C-AYLR299C-A 93 nt-1.01□□□□□ -2.57
TIR3P40552 YBR196C-AYBR196C-A 150 nt-1.01□□□□□ -2.57
TIR3P40552 YNL198CYNL198C 303 nt-1.03□□□□□ -2.57
TIR3P40552 YJL150WYJL150W 303 nt-1.08□□□□□ -2.58
TIR3P40552 YBL053WYBL053W 375 nt-1.08□□□□□ -2.58
TIR3P40552 tP(UGG)QtP(UGG)Q 72 nt-1.09□□□□□ -2.58
TIR3P40552 YML054C-AYML054C-A 159 nt-1.11□□□□□ -2.59
TIR3P40552 Q0142Q0142 177 nt-1.17□□□□□ -2.6
TIR3P40552 SOM1YEL059C-A 225 nt-1.18□□□□□ -2.6
TIR3P40552 YBR223W-AYBR223W-A 120 nt-1.19□□□□□ -2.6
TIR3P40552 YHR180C-BYHR180C-B 105 nt-1.24□□□□□ -2.61
TIR3P40552 YMR046W-AYMR046W-A 129 nt-1.24□□□□□ -2.61
TIR3P40552 YCR095W-AYCR095W-A 159 nt-1.28□□□□□ -2.61
TIR3P40552 SPG3YDR504C 384 nt-1.28□□□□□ -2.61
TIR3P40552 CDC65tQ(CUG)M 72 nt-1.28□□□□□ -2.61
TIR3P40552 snR77snR77 88 nt-1.29□□□□□ -2.62
TIR3P40552 YGR240C-AYGR240C-A 201 nt-1.29□□□□□ -2.62
TIR3P40552 YOR376W-AYOR376W-A 156 nt-1.29□□□□□ -2.62
TIR3P40552 YGR151CYGR151C 336 nt-1.43□□□□□ -2.64
TIR3P40552 YKL106C-AYKL106C-A 120 nt-1.43□□□□□ -2.64
TIR3P40552 tM(CAU)Q1tM(CAU)Q1 76 nt-1.44□□□□□ -2.64
TIR3P40552 YMR315W-AYMR315W-A 108 nt-1.44□□□□□ -2.64
TIR3P40552 YOL083C-AYOL083C-A 141 nt-1.46□□□□□ -2.64
TIR3P40552 YOR316C-AYOR316C-A 210 nt-1.46□□□□□ -2.64
TIR3P40552 YBR109W-AYBR109W-A 225 nt-1.46□□□□□ -2.64
TIR3P40552 tY(GUA)QtY(GUA)Q 84 nt-1.47□□□□□ -2.64
TIR3P40552 YBR296C-AYBR296C-A 120 nt-1.47□□□□□ -2.64
TIR3P40552 snR81snR81 201 nt-1.48□□□□□ -2.65
TIR3P40552 RPL41AYDL184C 78 nt-1.48□□□□□ -2.65
TIR3P40552 YLR466C-BYLR466C-B 117 nt-1.48□□□□□ -2.65
TIR3P40552 YBL071C-BYBL071C-B 99 nt-1.49□□□□□ -2.65
TIR3P40552 YCL001W-BYCL001W-B 255 nt-1.5□□□□□ -2.65
TIR3P40552 YNR077CYNR077C 255 nt-1.54□□□□□ -2.66
TIR3P40552 snR38snR38 95 nt-1.54□□□□□ -2.66
TIR3P40552 YNL338WYNL338W 159 nt-1.57□□□□□ -2.66
TIR3P40552 YOL164W-AYOL164W-A 183 nt-1.57□□□□□ -2.66
TIR3P40552 YAL037C-AYAL037C-A 93 nt-1.61□□□□□ -2.67
TIR3P40552 snR47snR47 99 nt-1.64□□□□□ -2.67
TIR3P40552 YBL100W-CYBL100W-C 120 nt-1.71□□□□□ -2.68
TIR3P40552 YNL337WYNL337W 255 nt-1.74□□□□□ -2.69
TIR3P40552 YOR309CYOR309C 381 nt-1.74□□□□□ -2.69
TIR3P40552 tS(GCU)Q1tS(GCU)Q1 86 nt-1.84□□□□□ -2.7
TIR3P40552 YKL225WYKL225W 348 nt-1.88□□□□□ -2.71
TIR3P40552 snR6snR6 112 nt-1.9□□□□□ -2.71
TIR3P40552 Q0032Q0032 291 nt-1.91□□□□□ -2.72
TIR3P40552 YGL041C-BYGL041C-B 183 nt-1.96□□□□□ -2.72
TIR3P40552 YGL007C-AYGL007C-A 87 nt-1.97□□□□□ -2.72
TIR3P40552 YOR335W-AYOR335W-A 81 nt-1.97□□□□□ -2.72
TIR3P40552 YNL103W-AYNL103W-A 90 nt-2.01□□□□□ -2.73
TIR3P40552 YDL114W-AYDL114W-A 114 nt-2.02□□□□□ -2.73
TIR3P40552 tV(UAC)QtV(UAC)Q 76 nt-2.04□□□□□ -2.74
TIR3P40552 snR61snR61 90 nt-2.05□□□□□ -2.74
TIR3P40552 snR73snR73 106 nt-2.06□□□□□ -2.74
TIR3P40552 RPL41BYDL133C-A 78 nt-2.07□□□□□ -2.74
TIR3P40552 YDR034C-AYDR034C-A 177 nt-2.07□□□□□ -2.74
TIR3P40552 YBR126W-BYBR126W-B 144 nt-2.1□□□□□ -2.75
Retrieved 100 of 7,029 protein–RNA pairs in 26.7 ms