Protein–RNA interactions for Protein: P40429

RPL13A, 60S ribosomal protein L13a, humanhuman

Known RBP Predictions only

Length 203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL13AP40429 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
RPL13AP40429 REST-206ENST00000612429 1376 ntTSL 5 BASIC13.75□□□□□ -0.21
RPL13AP40429 REST-207ENST00000616975 1370 ntTSL 5 BASIC13.75□□□□□ -0.21
RPL13AP40429 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
RPL13AP40429 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
RPL13AP40429 ERF-202ENST00000440177 2032 ntTSL 2 BASIC13.75□□□□□ -0.21
RPL13AP40429 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
RPL13AP40429 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC13.75□□□□□ -0.21
RPL13AP40429 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
RPL13AP40429 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
RPL13AP40429 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC13.75□□□□□ -0.21
RPL13AP40429 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
RPL13AP40429 MIR6724-1-201ENST00000616420 92 ntBASIC13.75□□□□□ -0.21
RPL13AP40429 MIR6724-2-201ENST00000616483 92 ntBASIC13.75□□□□□ -0.21
RPL13AP40429 MIR6724-4-201ENST00000617390 92 ntBASIC13.75□□□□□ -0.21
RPL13AP40429 MIR6724-3-201ENST00000622482 92 ntBASIC13.75□□□□□ -0.21
RPL13AP40429 EXOG-217ENST00000630638 197 ntTSL 5 BASIC13.75□□□□□ -0.21
RPL13AP40429 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC13.75□□□□□ -0.21
RPL13AP40429 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC13.75□□□□□ -0.21
RPL13AP40429 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
RPL13AP40429 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC13.75□□□□□ -0.21
RPL13AP40429 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
RPL13AP40429 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC13.75□□□□□ -0.21
RPL13AP40429 DET1-207ENST00000564406 2315 ntTSL 2 BASIC13.75□□□□□ -0.21
RPL13AP40429 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
RPL13AP40429 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
RPL13AP40429 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC13.75□□□□□ -0.21
RPL13AP40429 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
RPL13AP40429 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC13.75□□□□□ -0.21
RPL13AP40429 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC13.75□□□□□ -0.21
RPL13AP40429 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC13.75□□□□□ -0.21
RPL13AP40429 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
RPL13AP40429 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
RPL13AP40429 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
RPL13AP40429 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RPL13AP40429 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC13.74□□□□□ -0.21
RPL13AP40429 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
RPL13AP40429 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RPL13AP40429 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
RPL13AP40429 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
RPL13AP40429 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC13.74□□□□□ -0.21
RPL13AP40429 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC13.74□□□□□ -0.21
RPL13AP40429 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RPL13AP40429 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
RPL13AP40429 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
RPL13AP40429 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
RPL13AP40429 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RPL13AP40429 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RPL13AP40429 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
RPL13AP40429 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
RPL13AP40429 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC13.74□□□□□ -0.21
RPL13AP40429 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
RPL13AP40429 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC13.74□□□□□ -0.21
RPL13AP40429 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC13.74□□□□□ -0.21
RPL13AP40429 DUX4L4-201ENST00000566884 1269 ntBASIC13.74□□□□□ -0.21
RPL13AP40429 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
RPL13AP40429 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC13.74□□□□□ -0.21
RPL13AP40429 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC13.74□□□□□ -0.21
RPL13AP40429 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
RPL13AP40429 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RPL13AP40429 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC13.74□□□□□ -0.21
RPL13AP40429 RALGAPA1-201ENST00000307138 7911 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RPL13AP40429 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RPL13AP40429 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
RPL13AP40429 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RPL13AP40429 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
RPL13AP40429 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
RPL13AP40429 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC13.74□□□□□ -0.21
RPL13AP40429 AC099778.1-201ENST00000568593 1911 ntBASIC13.74□□□□□ -0.21
RPL13AP40429 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
RPL13AP40429 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC13.74□□□□□ -0.21
RPL13AP40429 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RPL13AP40429 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
RPL13AP40429 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RPL13AP40429 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
RPL13AP40429 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC13.74□□□□□ -0.21
RPL13AP40429 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
RPL13AP40429 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC13.73□□□□□ -0.21
RPL13AP40429 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC13.73□□□□□ -0.21
RPL13AP40429 PALM-207ENST00000590161 2137 ntTSL 4 BASIC13.73□□□□□ -0.21
RPL13AP40429 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RPL13AP40429 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC13.73□□□□□ -0.21
RPL13AP40429 AL512408.1-201ENST00000569378 2000 ntBASIC13.73□□□□□ -0.21
RPL13AP40429 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RPL13AP40429 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC13.73□□□□□ -0.21
RPL13AP40429 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC13.73□□□□□ -0.21
RPL13AP40429 NEFHP1-201ENST00000412845 2629 ntBASIC13.73□□□□□ -0.21
RPL13AP40429 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
RPL13AP40429 AR-207ENST00000612010 3896 ntTSL 5 BASIC13.73□□□□□ -0.21
RPL13AP40429 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RPL13AP40429 ASB1-202ENST00000409297 878 ntTSL 5 BASIC13.73□□□□□ -0.21
RPL13AP40429 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC13.73□□□□□ -0.21
RPL13AP40429 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC13.73□□□□□ -0.21
RPL13AP40429 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
RPL13AP40429 AL356740.2-201ENST00000601559 647 ntBASIC13.73□□□□□ -0.21
RPL13AP40429 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC13.73□□□□□ -0.21
RPL13AP40429 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC13.73□□□□□ -0.21
RPL13AP40429 AF131216.4-201ENST00000638924 1588 ntBASIC13.73□□□□□ -0.21
RPL13AP40429 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC13.73□□□□□ -0.21
RPL13AP40429 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC13.73□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms