Protein–RNA interactions for Protein: P40090

SCC4, MAU2 chromatid cohesion factor homolog, yeastyeast

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SCC4P40090 QCR9YGR183C 201 nt0.29□□□□□ -2.36
SCC4P40090 YHL015W-AYHL015W-A 84 nt0.29□□□□□ -2.36
SCC4P40090 YNL337WYNL337W 255 nt0.29□□□□□ -2.36
SCC4P40090 ESP1YGR098C 4893 nt0.29□□□□□ -2.36
SCC4P40090 YBL100W-BYBL100W-B 5313 nt0.28□□□□□ -2.36
SCC4P40090 RCO1YMR075W 2055 nt0.28□□□□□ -2.37
SCC4P40090 YOR102WYOR102W 351 nt0.27□□□□□ -2.37
SCC4P40090 tM(CAU)Q2tM(CAU)Q2 78 nt0.26□□□□□ -2.37
SCC4P40090 snR48snR48 113 nt0.26□□□□□ -2.37
SCC4P40090 GLG1YKR058W 1851 nt0.26□□□□□ -2.37
SCC4P40090 YDL007C-AYDL007C-A 258 nt0.22□□□□□ -2.37
SCC4P40090 YGL007C-AYGL007C-A 87 nt0.22□□□□□ -2.37
SCC4P40090 YNL067W-BYNL067W-B 141 nt0.21□□□□□ -2.38
SCC4P40090 YOL014WYOL014W 375 nt0.21□□□□□ -2.38
SCC4P40090 YOR225WYOR225W 330 nt0.21□□□□□ -2.38
SCC4P40090 YOL013W-AYOL013W-A 192 nt0.19□□□□□ -2.38
SCC4P40090 YBR099CYBR099C 384 nt0.18□□□□□ -2.38
SCC4P40090 EST1YLR233C 2100 nt0.16□□□□□ -2.38
SCC4P40090 Q0032Q0032 291 nt0.14□□□□□ -2.39
SCC4P40090 YGR146C-AYGR146C-A 162 nt0.14□□□□□ -2.39
SCC4P40090 YLR294CYLR294C 330 nt0.14□□□□□ -2.39
SCC4P40090 SOV1YMR066W 2697 nt0.12□□□□□ -2.39
SCC4P40090 YIL071W-AYIL071W-A 477 nt0.12□□□□□ -2.39
SCC4P40090 snR69snR69 101 nt0.11□□□□□ -2.39
SCC4P40090 YOR186C-AYOR186C-A 210 nt0.11□□□□□ -2.39
SCC4P40090 PMP2YEL017C-A 132 nt0.09□□□□□ -2.4
SCC4P40090 YPL060C-AYPL060C-A 3315 nt0.08□□□□□ -2.4
SCC4P40090 YGR164WYGR164W 336 nt0.08□□□□□ -2.4
SCC4P40090 tQ(UUG)QtQ(UUG)Q 76 nt0.08□□□□□ -2.4
SCC4P40090 YBR178WYBR178W 375 nt0.08□□□□□ -2.4
SCC4P40090 YCL001W-BYCL001W-B 255 nt0.08□□□□□ -2.4
SCC4P40090 SOM1YEL059C-A 225 nt0.07□□□□□ -2.4
SCC4P40090 YNL205CYNL205C 423 nt0.07□□□□□ -2.4
SCC4P40090 YER078W-AYER078W-A 165 nt0.06□□□□□ -2.4
SCC4P40090 SEC10YLR166C 2616 nt0.04□□□□□ -2.4
SCC4P40090 snR50snR50 90 nt0.03□□□□□ -2.4
SCC4P40090 tD(GUC)QtD(GUC)Q 75 nt0.02□□□□□ -2.41
SCC4P40090 YNL266WYNL266W 420 nt0.02□□□□□ -2.41
SCC4P40090 snR128snR128 126 nt0.02□□□□□ -2.41
SCC4P40090 RDS3YPR094W 324 nt0.01□□□□□ -2.41
SCC4P40090 YCR095W-AYCR095W-A 159 nt0□□□□□ -2.41
SCC4P40090 YJL077W-AYJL077W-A 87 nt0□□□□□ -2.41
SCC4P40090 YLR286W-AYLR286W-A 135 nt-0.03□□□□□ -2.41
SCC4P40090 YBR196C-AYBR196C-A 150 nt-0.04□□□□□ -2.42
SCC4P40090 YDL159C-BYDL159C-B 177 nt-0.05□□□□□ -2.42
SCC4P40090 YER090C-AYER090C-A 90 nt-0.05□□□□□ -2.42
SCC4P40090 RPM2YML091C 3609 nt-0.05□□□□□ -2.42
SCC4P40090 YNL170WYNL170W 396 nt-0.08□□□□□ -2.42
SCC4P40090 snR45snR45 172 nt-0.08□□□□□ -2.42
SCC4P40090 YML100W-AYML100W-A 174 nt-0.09□□□□□ -2.42
SCC4P40090 YLR299C-AYLR299C-A 93 nt-0.11□□□□□ -2.43
SCC4P40090 ATP8Q0080 147 nt-0.12□□□□□ -2.43
SCC4P40090 PAU9YBL108C-A 129 nt-0.15□□□□□ -2.43
SCC4P40090 YML054C-AYML054C-A 159 nt-0.16□□□□□ -2.44
SCC4P40090 YOL083C-AYOL083C-A 141 nt-0.16□□□□□ -2.44
SCC4P40090 snR67snR67 82 nt-0.18□□□□□ -2.44
SCC4P40090 SBH2YER019C-A 267 nt-0.18□□□□□ -2.44
SCC4P40090 YNL103W-AYNL103W-A 90 nt-0.18□□□□□ -2.44
SCC4P40090 YBL071C-BYBL071C-B 99 nt-0.19□□□□□ -2.44
SCC4P40090 Q0092Q0092 141 nt-0.2□□□□□ -2.44
SCC4P40090 SKI7YOR076C 2244 nt-0.21□□□□□ -2.44
SCC4P40090 snR81snR81 201 nt-0.22□□□□□ -2.44
SCC4P40090 TFB5YDR079C-A 219 nt-0.23□□□□□ -2.45
SCC4P40090 tA(UGC)QtA(UGC)Q 76 nt-0.24□□□□□ -2.45
SCC4P40090 YHR180C-BYHR180C-B 105 nt-0.25□□□□□ -2.45
SCC4P40090 YGL041C-BYGL041C-B 183 nt-0.28□□□□□ -2.45
SCC4P40090 YAL037C-AYAL037C-A 93 nt-0.28□□□□□ -2.45
SCC4P40090 YOL164W-AYOL164W-A 183 nt-0.28□□□□□ -2.45
SCC4P40090 snR47snR47 99 nt-0.32□□□□□ -2.46
SCC4P40090 YBR109W-AYBR109W-A 225 nt-0.33□□□□□ -2.46
SCC4P40090 YJL113WYJL113W 4647 nt-0.34□□□□□ -2.46
SCC4P40090 snR61snR61 90 nt-0.34□□□□□ -2.46
SCC4P40090 tS(GCU)Q1tS(GCU)Q1 86 nt-0.36□□□□□ -2.47
SCC4P40090 Q0143Q0143 153 nt-0.37□□□□□ -2.47
SCC4P40090 snR38snR38 95 nt-0.37□□□□□ -2.47
SCC4P40090 YGR240C-AYGR240C-A 201 nt-0.38□□□□□ -2.47
SCC4P40090 RPL41AYDL184C 78 nt-0.39□□□□□ -2.47
SCC4P40090 snR161snR161 161 nt-0.42□□□□□ -2.48
SCC4P40090 YBR296C-AYBR296C-A 120 nt-0.42□□□□□ -2.48
SCC4P40090 YBL100W-CYBL100W-C 120 nt-0.43□□□□□ -2.48
SCC4P40090 YOR376W-AYOR376W-A 156 nt-0.45□□□□□ -2.48
SCC4P40090 YDR034C-AYDR034C-A 177 nt-0.49□□□□□ -2.49
SCC4P40090 YKL106C-AYKL106C-A 120 nt-0.51□□□□□ -2.49
SCC4P40090 snR85snR85 171 nt-0.52□□□□□ -2.49
SCC4P40090 YKL225WYKL225W 348 nt-0.53□□□□□ -2.49
SCC4P40090 snR62snR62 100 nt-0.54□□□□□ -2.5
SCC4P40090 snR33snR33 183 nt-0.54□□□□□ -2.5
SCC4P40090 URB1YKL014C 5295 nt-0.54□□□□□ -2.5
SCC4P40090 YBL109WYBL109W 336 nt-0.55□□□□□ -2.5
SCC4P40090 YMR326CYMR326C 309 nt-0.58□□□□□ -2.5
SCC4P40090 tT(UGU)G1tT(UGU)G1 72 nt-0.59□□□□□ -2.5
SCC4P40090 tT(UGU)G2tT(UGU)G2 72 nt-0.59□□□□□ -2.5
SCC4P40090 tT(UGU)PtT(UGU)P 72 nt-0.59□□□□□ -2.5
SCC4P40090 YHR217CYHR217C 462 nt-0.6□□□□□ -2.51
SCC4P40090 snR77snR77 88 nt-0.62□□□□□ -2.51
SCC4P40090 tP(UGG)QtP(UGG)Q 72 nt-0.63□□□□□ -2.51
SCC4P40090 YOR316C-AYOR316C-A 210 nt-0.64□□□□□ -2.51
SCC4P40090 YDL159W-AYDL159W-A 132 nt-0.65□□□□□ -2.51
SCC4P40090 YLL066W-BYLL066W-B 171 nt-0.68□□□□□ -2.52
SCC4P40090 YHL009W-BYHL009W-B 5409 nt-0.68□□□□□ -2.52
Retrieved 100 of 7,029 protein–RNA pairs in 10.6 ms