Protein–RNA interactions for Protein: P39552

MST28, Multicopy suppressor of SEC21 protein 28, yeastyeast

Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MST28P39552 tF(GAA)MtF(GAA)M 73 nt0.35□□□□□ -2.35
MST28P39552 tF(GAA)P1tF(GAA)P1 73 nt0.35□□□□□ -2.35
MST28P39552 tF(GAA)P2tF(GAA)P2 73 nt0.35□□□□□ -2.35
MST28P39552 RCO1YMR075W 2055 nt0.34□□□□□ -2.35
MST28P39552 YNL067W-BYNL067W-B 141 nt0.31□□□□□ -2.36
MST28P39552 YOR225WYOR225W 330 nt0.31□□□□□ -2.36
MST28P39552 YBL100W-BYBL100W-B 5313 nt0.31□□□□□ -2.36
MST28P39552 YGR146C-AYGR146C-A 162 nt0.29□□□□□ -2.36
MST28P39552 YOR186C-AYOR186C-A 210 nt0.29□□□□□ -2.36
MST28P39552 YBR099CYBR099C 384 nt0.29□□□□□ -2.36
MST28P39552 RPM2YML091C 3609 nt0.28□□□□□ -2.36
MST28P39552 FMP27YLR454W 7887 nt0.28□□□□□ -2.36
MST28P39552 UTP20YBL004W 7482 nt0.26□□□□□ -2.37
MST28P39552 YOL014WYOL014W 375 nt0.24□□□□□ -2.37
MST28P39552 IQG1YPL242C 4488 nt0.24□□□□□ -2.37
MST28P39552 YLR294CYLR294C 330 nt0.22□□□□□ -2.37
MST28P39552 YOL013W-AYOL013W-A 192 nt0.22□□□□□ -2.37
MST28P39552 EST1YLR233C 2100 nt0.22□□□□□ -2.37
MST28P39552 YNL205CYNL205C 423 nt0.18□□□□□ -2.38
MST28P39552 AI1Q0050 2505 nt0.17□□□□□ -2.38
MST28P39552 snR69snR69 101 nt0.17□□□□□ -2.38
MST28P39552 MLP2YIL149C 5040 nt0.17□□□□□ -2.38
MST28P39552 PMP2YEL017C-A 132 nt0.16□□□□□ -2.38
MST28P39552 ESP1YGR098C 4893 nt0.14□□□□□ -2.39
MST28P39552 YJL077W-AYJL077W-A 87 nt0.14□□□□□ -2.39
MST28P39552 SOV1YMR066W 2697 nt0.13□□□□□ -2.39
MST28P39552 SOM1YEL059C-A 225 nt0.13□□□□□ -2.39
MST28P39552 YNL054W-BYNL054W-B 5250 nt0.12□□□□□ -2.39
MST28P39552 YPL060C-AYPL060C-A 3315 nt0.12□□□□□ -2.39
MST28P39552 tQ(UUG)QtQ(UUG)Q 76 nt0.1□□□□□ -2.39
MST28P39552 SEC10YLR166C 2616 nt0.1□□□□□ -2.39
MST28P39552 YCR095W-AYCR095W-A 159 nt0.09□□□□□ -2.4
MST28P39552 YGR164WYGR164W 336 nt0.09□□□□□ -2.4
MST28P39552 RDS3YPR094W 324 nt0.07□□□□□ -2.4
MST28P39552 YIL071W-AYIL071W-A 477 nt0.06□□□□□ -2.4
MST28P39552 YNL266WYNL266W 420 nt0.06□□□□□ -2.4
MST28P39552 YCL001W-BYCL001W-B 255 nt0.06□□□□□ -2.4
MST28P39552 tD(GUC)QtD(GUC)Q 75 nt0.05□□□□□ -2.4
MST28P39552 snR128snR128 126 nt0.05□□□□□ -2.4
MST28P39552 YBR178WYBR178W 375 nt0.05□□□□□ -2.4
MST28P39552 YER078W-AYER078W-A 165 nt0.04□□□□□ -2.4
MST28P39552 THO2YNL139C 4794 nt0□□□□□ -2.41
MST28P39552 YBR196C-AYBR196C-A 150 nt-0.01□□□□□ -2.41
MST28P39552 YER090C-AYER090C-A 90 nt-0.04□□□□□ -2.42
MST28P39552 YLR286W-AYLR286W-A 135 nt-0.04□□□□□ -2.42
MST28P39552 snR50snR50 90 nt-0.04□□□□□ -2.42
MST28P39552 YDL159C-BYDL159C-B 177 nt-0.05□□□□□ -2.42
MST28P39552 YNL170WYNL170W 396 nt-0.08□□□□□ -2.42
MST28P39552 snR45snR45 172 nt-0.08□□□□□ -2.42
MST28P39552 YML100W-AYML100W-A 174 nt-0.1□□□□□ -2.43
MST28P39552 ATP8Q0080 147 nt-0.13□□□□□ -2.43
MST28P39552 YLR299C-AYLR299C-A 93 nt-0.13□□□□□ -2.43
MST28P39552 snR67snR67 82 nt-0.21□□□□□ -2.44
MST28P39552 SBH2YER019C-A 267 nt-0.21□□□□□ -2.44
MST28P39552 Q0092Q0092 141 nt-0.24□□□□□ -2.45
MST28P39552 PAU9YBL108C-A 129 nt-0.24□□□□□ -2.45
MST28P39552 YOL083C-AYOL083C-A 141 nt-0.27□□□□□ -2.45
MST28P39552 YML054C-AYML054C-A 159 nt-0.28□□□□□ -2.45
MST28P39552 TFB5YDR079C-A 219 nt-0.32□□□□□ -2.46
MST28P39552 tA(UGC)QtA(UGC)Q 76 nt-0.32□□□□□ -2.46
MST28P39552 YBL071C-BYBL071C-B 99 nt-0.32□□□□□ -2.46
MST28P39552 YHR180C-BYHR180C-B 105 nt-0.33□□□□□ -2.46
MST28P39552 YAL037C-AYAL037C-A 93 nt-0.33□□□□□ -2.46
MST28P39552 YNL103W-AYNL103W-A 90 nt-0.33□□□□□ -2.46
MST28P39552 snR81snR81 201 nt-0.35□□□□□ -2.47
MST28P39552 SKI7YOR076C 2244 nt-0.37□□□□□ -2.47
MST28P39552 snR61snR61 90 nt-0.41□□□□□ -2.48
MST28P39552 YGL041C-BYGL041C-B 183 nt-0.41□□□□□ -2.48
MST28P39552 YOL164W-AYOL164W-A 183 nt-0.41□□□□□ -2.48
MST28P39552 YBL100W-CYBL100W-C 120 nt-0.49□□□□□ -2.49
MST28P39552 snR47snR47 99 nt-0.49□□□□□ -2.49
MST28P39552 YBR109W-AYBR109W-A 225 nt-0.5□□□□□ -2.49
MST28P39552 RPL41AYDL184C 78 nt-0.51□□□□□ -2.49
MST28P39552 Q0143Q0143 153 nt-0.51□□□□□ -2.49
MST28P39552 YGR240C-AYGR240C-A 201 nt-0.52□□□□□ -2.49
MST28P39552 YBR296C-AYBR296C-A 120 nt-0.53□□□□□ -2.49
MST28P39552 URB1YKL014C 5295 nt-0.59□□□□□ -2.5
MST28P39552 snR161snR161 161 nt-0.61□□□□□ -2.51
MST28P39552 snR38snR38 95 nt-0.61□□□□□ -2.51
MST28P39552 tS(GCU)Q1tS(GCU)Q1 86 nt-0.64□□□□□ -2.51
MST28P39552 snR85snR85 171 nt-0.69□□□□□ -2.52
MST28P39552 YOR376W-AYOR376W-A 156 nt-0.69□□□□□ -2.52
MST28P39552 snR62snR62 100 nt-0.7□□□□□ -2.52
MST28P39552 YKL106C-AYKL106C-A 120 nt-0.7□□□□□ -2.52
MST28P39552 YJL113WYJL113W 4647 nt-0.71□□□□□ -2.52
MST28P39552 YDR034C-AYDR034C-A 177 nt-0.72□□□□□ -2.52
MST28P39552 YMR326CYMR326C 309 nt-0.72□□□□□ -2.52
MST28P39552 YKL225WYKL225W 348 nt-0.76□□□□□ -2.53
MST28P39552 snR33snR33 183 nt-0.76□□□□□ -2.53
MST28P39552 YHR217CYHR217C 462 nt-0.78□□□□□ -2.53
MST28P39552 YHL009W-BYHL009W-B 5409 nt-0.8□□□□□ -2.54
MST28P39552 tT(UGU)G1tT(UGU)G1 72 nt-0.81□□□□□ -2.54
MST28P39552 tT(UGU)G2tT(UGU)G2 72 nt-0.81□□□□□ -2.54
MST28P39552 tT(UGU)PtT(UGU)P 72 nt-0.81□□□□□ -2.54
MST28P39552 YOR316C-AYOR316C-A 210 nt-0.83□□□□□ -2.54
MST28P39552 YBL109WYBL109W 336 nt-0.84□□□□□ -2.54
MST28P39552 snR77snR77 88 nt-0.97□□□□□ -2.56
MST28P39552 YLL066W-BYLL066W-B 171 nt-0.99□□□□□ -2.57
MST28P39552 snR64snR64 101 nt-1□□□□□ -2.57
MST28P39552 tP(UGG)QtP(UGG)Q 72 nt-1□□□□□ -2.57
Retrieved 100 of 7,029 protein–RNA pairs in 57 ms