Protein–RNA interactions for Protein: P38925

SMF1, Manganese transporter SMF1, yeastyeast

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SMF1P38925 EST1YLR233C 2100 nt0.02□□□□□ -2.41
SMF1P38925 MYO1YHR023W 5787 nt0.01□□□□□ -2.41
SMF1P38925 YMR046W-AYMR046W-A 129 nt-0.02□□□□□ -2.41
SMF1P38925 snR128snR128 126 nt-0.04□□□□□ -2.42
SMF1P38925 snR39BsnR39B 96 nt-0.05□□□□□ -2.42
SMF1P38925 SPG3YDR504C 384 nt-0.06□□□□□ -2.42
SMF1P38925 YOR329W-AYOR329W-A 210 nt-0.06□□□□□ -2.42
SMF1P38925 snR48snR48 113 nt-0.06□□□□□ -2.42
SMF1P38925 YGR146C-AYGR146C-A 162 nt-0.08□□□□□ -2.42
SMF1P38925 YJL077W-AYJL077W-A 87 nt-0.08□□□□□ -2.42
SMF1P38925 YPL060C-AYPL060C-A 3315 nt-0.11□□□□□ -2.43
SMF1P38925 YHL015W-AYHL015W-A 84 nt-0.13□□□□□ -2.43
SMF1P38925 JLP2YMR132C 627 nt-0.13□□□□□ -2.43
SMF1P38925 tM(CAU)Q1tM(CAU)Q1 76 nt-0.14□□□□□ -2.43
SMF1P38925 TFB5YDR079C-A 219 nt-0.17□□□□□ -2.44
SMF1P38925 YGR164WYGR164W 336 nt-0.17□□□□□ -2.44
SMF1P38925 YOR102WYOR102W 351 nt-0.18□□□□□ -2.44
SMF1P38925 snR69snR69 101 nt-0.19□□□□□ -2.44
SMF1P38925 tL(UAA)QtL(UAA)Q 85 nt-0.19□□□□□ -2.44
SMF1P38925 YJL150WYJL150W 303 nt-0.19□□□□□ -2.44
SMF1P38925 YDL007C-AYDL007C-A 258 nt-0.2□□□□□ -2.44
SMF1P38925 PMP2YEL017C-A 132 nt-0.23□□□□□ -2.45
SMF1P38925 tQ(UUG)QtQ(UUG)Q 76 nt-0.23□□□□□ -2.45
SMF1P38925 YNL067W-BYNL067W-B 141 nt-0.23□□□□□ -2.45
SMF1P38925 YNL205CYNL205C 423 nt-0.27□□□□□ -2.45
SMF1P38925 RDS3YPR094W 324 nt-0.29□□□□□ -2.46
SMF1P38925 SBH2YER019C-A 267 nt-0.3□□□□□ -2.46
SMF1P38925 YNL198CYNL198C 303 nt-0.32□□□□□ -2.46
SMF1P38925 YML100W-AYML100W-A 174 nt-0.35□□□□□ -2.47
SMF1P38925 SEC10YLR166C 2616 nt-0.36□□□□□ -2.47
SMF1P38925 tD(GUC)QtD(GUC)Q 75 nt-0.38□□□□□ -2.47
SMF1P38925 YER090C-AYER090C-A 90 nt-0.38□□□□□ -2.47
SMF1P38925 YIL071W-AYIL071W-A 477 nt-0.42□□□□□ -2.48
SMF1P38925 YLR466C-BYLR466C-B 117 nt-0.44□□□□□ -2.48
SMF1P38925 YBL053WYBL053W 375 nt-0.44□□□□□ -2.48
SMF1P38925 YBR178WYBR178W 375 nt-0.45□□□□□ -2.48
SMF1P38925 snR50snR50 90 nt-0.46□□□□□ -2.48
SMF1P38925 YGR151CYGR151C 336 nt-0.47□□□□□ -2.48
SMF1P38925 YLR286W-AYLR286W-A 135 nt-0.47□□□□□ -2.48
SMF1P38925 YNL266WYNL266W 420 nt-0.47□□□□□ -2.48
SMF1P38925 URB1YKL014C 5295 nt-0.51□□□□□ -2.49
SMF1P38925 PAU9YBL108C-A 129 nt-0.51□□□□□ -2.49
SMF1P38925 YDL159C-BYDL159C-B 177 nt-0.52□□□□□ -2.49
SMF1P38925 SOM1YEL059C-A 225 nt-0.53□□□□□ -2.49
SMF1P38925 YBR196C-AYBR196C-A 150 nt-0.54□□□□□ -2.5
SMF1P38925 tA(UGC)QtA(UGC)Q 76 nt-0.55□□□□□ -2.5
SMF1P38925 YJL113WYJL113W 4647 nt-0.55□□□□□ -2.5
SMF1P38925 YNL337WYNL337W 255 nt-0.56□□□□□ -2.5
SMF1P38925 YCR095W-AYCR095W-A 159 nt-0.57□□□□□ -2.5
SMF1P38925 snR67snR67 82 nt-0.6□□□□□ -2.51
SMF1P38925 YNL338WYNL338W 159 nt-0.61□□□□□ -2.51
SMF1P38925 YLR299C-AYLR299C-A 93 nt-0.63□□□□□ -2.51
SMF1P38925 YHL009W-BYHL009W-B 5409 nt-0.65□□□□□ -2.51
SMF1P38925 Q0032Q0032 291 nt-0.69□□□□□ -2.52
SMF1P38925 tT(UGU)G1tT(UGU)G1 72 nt-0.76□□□□□ -2.53
SMF1P38925 tT(UGU)G2tT(UGU)G2 72 nt-0.76□□□□□ -2.53
SMF1P38925 tT(UGU)PtT(UGU)P 72 nt-0.76□□□□□ -2.53
SMF1P38925 YGL007C-AYGL007C-A 87 nt-0.79□□□□□ -2.54
SMF1P38925 snR33snR33 183 nt-0.79□□□□□ -2.54
SMF1P38925 YCL001W-BYCL001W-B 255 nt-0.81□□□□□ -2.54
SMF1P38925 SKI7YOR076C 2244 nt-0.83□□□□□ -2.54
SMF1P38925 YML054C-AYML054C-A 159 nt-0.87□□□□□ -2.55
SMF1P38925 YHR180C-BYHR180C-B 105 nt-0.91□□□□□ -2.56
SMF1P38925 snR161snR161 161 nt-0.97□□□□□ -2.56
SMF1P38925 YNR077CYNR077C 255 nt-1.04□□□□□ -2.58
SMF1P38925 YOL083C-AYOL083C-A 141 nt-1.05□□□□□ -2.58
SMF1P38925 YBR223W-AYBR223W-A 120 nt-1.07□□□□□ -2.58
SMF1P38925 YOR225WYOR225W 330 nt-1.08□□□□□ -2.58
SMF1P38925 YLR294CYLR294C 330 nt-1.1□□□□□ -2.59
SMF1P38925 YAL037C-AYAL037C-A 93 nt-1.11□□□□□ -2.59
SMF1P38925 YBL071C-BYBL071C-B 99 nt-1.12□□□□□ -2.59
SMF1P38925 RPL41AYDL184C 78 nt-1.19□□□□□ -2.6
SMF1P38925 YOL164W-AYOL164W-A 183 nt-1.19□□□□□ -2.6
SMF1P38925 YBR296C-AYBR296C-A 120 nt-1.19□□□□□ -2.6
SMF1P38925 tP(UGG)QtP(UGG)Q 72 nt-1.21□□□□□ -2.6
SMF1P38925 YBR109W-AYBR109W-A 225 nt-1.22□□□□□ -2.6
SMF1P38925 snR81snR81 201 nt-1.23□□□□□ -2.61
SMF1P38925 YBL100W-CYBL100W-C 120 nt-1.23□□□□□ -2.61
SMF1P38925 YOR376W-AYOR376W-A 156 nt-1.28□□□□□ -2.61
SMF1P38925 YKL106C-AYKL106C-A 120 nt-1.3□□□□□ -2.62
SMF1P38925 YNL170WYNL170W 396 nt-1.32□□□□□ -2.62
SMF1P38925 snR47snR47 99 nt-1.32□□□□□ -2.62
SMF1P38925 YGR240C-AYGR240C-A 201 nt-1.34□□□□□ -2.62
SMF1P38925 snR38snR38 95 nt-1.39□□□□□ -2.63
SMF1P38925 snR61snR61 90 nt-1.4□□□□□ -2.63
SMF1P38925 YGL041C-BYGL041C-B 183 nt-1.41□□□□□ -2.64
SMF1P38925 YNL103W-AYNL103W-A 90 nt-1.41□□□□□ -2.64
SMF1P38925 YOR316C-AYOR316C-A 210 nt-1.41□□□□□ -2.64
SMF1P38925 ATP8Q0080 147 nt-1.49□□□□□ -2.65
SMF1P38925 CDC65tQ(CUG)M 72 nt-1.49□□□□□ -2.65
SMF1P38925 tY(GUA)QtY(GUA)Q 84 nt-1.49□□□□□ -2.65
SMF1P38925 snR77snR77 88 nt-1.5□□□□□ -2.65
SMF1P38925 tS(GCU)Q1tS(GCU)Q1 86 nt-1.59□□□□□ -2.66
SMF1P38925 YKL225WYKL225W 348 nt-1.62□□□□□ -2.67
SMF1P38925 YMR315W-AYMR315W-A 108 nt-1.68□□□□□ -2.68
SMF1P38925 snR62snR62 100 nt-1.7□□□□□ -2.68
SMF1P38925 YDR034C-AYDR034C-A 177 nt-1.7□□□□□ -2.68
SMF1P38925 Q0092Q0092 141 nt-1.78□□□□□ -2.69
SMF1P38925 Q0143Q0143 153 nt-1.87□□□□□ -2.71
SMF1P38925 YBR126W-BYBR126W-B 144 nt-1.91□□□□□ -2.72
Retrieved 100 of 7,029 protein–RNA pairs in 12.2 ms