Protein–RNA interactions for Protein: P38915

SPT8, Transcription factor SPT8, yeastyeast

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SPT8P38915 snR39BsnR39B 96 nt-0.32□□□□□ -2.46
SPT8P38915 snR46snR46 197 nt-0.33□□□□□ -2.46
SPT8P38915 SEC10YLR166C 2616 nt-0.35□□□□□ -2.47
SPT8P38915 SBH2YER019C-A 267 nt-0.35□□□□□ -2.47
SPT8P38915 URB1YKL014C 5295 nt-0.36□□□□□ -2.47
SPT8P38915 YOR329W-AYOR329W-A 210 nt-0.36□□□□□ -2.47
SPT8P38915 RPM2YML091C 3609 nt-0.38□□□□□ -2.47
SPT8P38915 Q0142Q0142 177 nt-0.38□□□□□ -2.47
SPT8P38915 YML100W-AYML100W-A 174 nt-0.38□□□□□ -2.47
SPT8P38915 snR69snR69 101 nt-0.39□□□□□ -2.47
SPT8P38915 tM(CAU)Q2tM(CAU)Q2 78 nt-0.39□□□□□ -2.47
SPT8P38915 YDL007C-AYDL007C-A 258 nt-0.4□□□□□ -2.47
SPT8P38915 YNL067W-BYNL067W-B 141 nt-0.42□□□□□ -2.48
SPT8P38915 YGR146C-AYGR146C-A 162 nt-0.44□□□□□ -2.48
SPT8P38915 YJL077W-AYJL077W-A 87 nt-0.44□□□□□ -2.48
SPT8P38915 snR52snR52 92 nt-0.44□□□□□ -2.48
SPT8P38915 tL(UAA)QtL(UAA)Q 85 nt-0.45□□□□□ -2.48
SPT8P38915 tQ(UUG)QtQ(UUG)Q 76 nt-0.46□□□□□ -2.48
SPT8P38915 PMP2YEL017C-A 132 nt-0.47□□□□□ -2.48
SPT8P38915 snR48snR48 113 nt-0.48□□□□□ -2.49
SPT8P38915 JLP2YMR132C 627 nt-0.49□□□□□ -2.49
SPT8P38915 snR50snR50 90 nt-0.5□□□□□ -2.49
SPT8P38915 YIL071W-AYIL071W-A 477 nt-0.51□□□□□ -2.49
SPT8P38915 YNL266WYNL266W 420 nt-0.51□□□□□ -2.49
SPT8P38915 tA(UGC)QtA(UGC)Q 76 nt-0.52□□□□□ -2.49
SPT8P38915 YER090C-AYER090C-A 90 nt-0.53□□□□□ -2.49
SPT8P38915 RDS3YPR094W 324 nt-0.53□□□□□ -2.49
SPT8P38915 YLR342W-AYLR342W-A 174 nt-0.56□□□□□ -2.5
SPT8P38915 tT(UGU)G1tT(UGU)G1 72 nt-0.58□□□□□ -2.5
SPT8P38915 tT(UGU)G2tT(UGU)G2 72 nt-0.58□□□□□ -2.5
SPT8P38915 tT(UGU)PtT(UGU)P 72 nt-0.58□□□□□ -2.5
SPT8P38915 PAU9YBL108C-A 129 nt-0.58□□□□□ -2.5
SPT8P38915 tD(GUC)QtD(GUC)Q 75 nt-0.61□□□□□ -2.51
SPT8P38915 YBR178WYBR178W 375 nt-0.61□□□□□ -2.51
SPT8P38915 YJL150WYJL150W 303 nt-0.62□□□□□ -2.51
SPT8P38915 YBL053WYBL053W 375 nt-0.62□□□□□ -2.51
SPT8P38915 YHL015W-AYHL015W-A 84 nt-0.64□□□□□ -2.51
SPT8P38915 YNL205CYNL205C 423 nt-0.64□□□□□ -2.51
SPT8P38915 YOR102WYOR102W 351 nt-0.64□□□□□ -2.51
SPT8P38915 YNL198CYNL198C 303 nt-0.65□□□□□ -2.51
SPT8P38915 YLR286W-AYLR286W-A 135 nt-0.66□□□□□ -2.52
SPT8P38915 snR33snR33 183 nt-0.66□□□□□ -2.52
SPT8P38915 YDR406W-AYDR406W-A 246 nt-0.67□□□□□ -2.52
SPT8P38915 snR161snR161 161 nt-0.68□□□□□ -2.52
SPT8P38915 YHL009W-BYHL009W-B 5409 nt-0.7□□□□□ -2.52
SPT8P38915 YDL159C-BYDL159C-B 177 nt-0.72□□□□□ -2.52
SPT8P38915 SKI7YOR076C 2244 nt-0.73□□□□□ -2.53
SPT8P38915 snR67snR67 82 nt-0.75□□□□□ -2.53
SPT8P38915 SPG3YDR504C 384 nt-0.79□□□□□ -2.54
SPT8P38915 YLR299C-AYLR299C-A 93 nt-0.84□□□□□ -2.54
SPT8P38915 YMR046W-AYMR046W-A 129 nt-0.84□□□□□ -2.54
SPT8P38915 YBR196C-AYBR196C-A 150 nt-0.84□□□□□ -2.54
SPT8P38915 YBR223W-AYBR223W-A 120 nt-0.85□□□□□ -2.55
SPT8P38915 SOM1YEL059C-A 225 nt-0.92□□□□□ -2.56
SPT8P38915 YML054C-AYML054C-A 159 nt-0.93□□□□□ -2.56
SPT8P38915 tM(CAU)Q1tM(CAU)Q1 76 nt-1□□□□□ -2.57
SPT8P38915 tP(UGG)QtP(UGG)Q 72 nt-1□□□□□ -2.57
SPT8P38915 YLR466C-BYLR466C-B 117 nt-1.01□□□□□ -2.57
SPT8P38915 YCR095W-AYCR095W-A 159 nt-1.02□□□□□ -2.57
SPT8P38915 YGR151CYGR151C 336 nt-1.07□□□□□ -2.58
SPT8P38915 YNR077CYNR077C 255 nt-1.08□□□□□ -2.58
SPT8P38915 YHR180C-BYHR180C-B 105 nt-1.09□□□□□ -2.58
SPT8P38915 YNL338WYNL338W 159 nt-1.1□□□□□ -2.59
SPT8P38915 YOR376W-AYOR376W-A 156 nt-1.12□□□□□ -2.59
SPT8P38915 YCL001W-BYCL001W-B 255 nt-1.12□□□□□ -2.59
SPT8P38915 snR77snR77 88 nt-1.15□□□□□ -2.59
SPT8P38915 YBL071C-BYBL071C-B 99 nt-1.19□□□□□ -2.6
SPT8P38915 YOL083C-AYOL083C-A 141 nt-1.2□□□□□ -2.6
SPT8P38915 CDC65tQ(CUG)M 72 nt-1.21□□□□□ -2.6
SPT8P38915 YBR109W-AYBR109W-A 225 nt-1.21□□□□□ -2.6
SPT8P38915 tY(GUA)QtY(GUA)Q 84 nt-1.24□□□□□ -2.61
SPT8P38915 snR38snR38 95 nt-1.26□□□□□ -2.61
SPT8P38915 YGR240C-AYGR240C-A 201 nt-1.28□□□□□ -2.61
SPT8P38915 YOL164W-AYOL164W-A 183 nt-1.31□□□□□ -2.62
SPT8P38915 YBR296C-AYBR296C-A 120 nt-1.31□□□□□ -2.62
SPT8P38915 YKL106C-AYKL106C-A 120 nt-1.32□□□□□ -2.62
SPT8P38915 RPL41AYDL184C 78 nt-1.33□□□□□ -2.62
SPT8P38915 snR81snR81 201 nt-1.34□□□□□ -2.62
SPT8P38915 YAL037C-AYAL037C-A 93 nt-1.34□□□□□ -2.62
SPT8P38915 YOR316C-AYOR316C-A 210 nt-1.35□□□□□ -2.63
SPT8P38915 YNL337WYNL337W 255 nt-1.37□□□□□ -2.63
SPT8P38915 YMR315W-AYMR315W-A 108 nt-1.4□□□□□ -2.63
SPT8P38915 snR47snR47 99 nt-1.4□□□□□ -2.63
SPT8P38915 YGL007C-AYGL007C-A 87 nt-1.41□□□□□ -2.64
SPT8P38915 Q0032Q0032 291 nt-1.43□□□□□ -2.64
SPT8P38915 tS(GCU)Q1tS(GCU)Q1 86 nt-1.54□□□□□ -2.66
SPT8P38915 YBL100W-CYBL100W-C 120 nt-1.56□□□□□ -2.66
SPT8P38915 YBR126W-BYBR126W-B 144 nt-1.56□□□□□ -2.66
SPT8P38915 YNL103W-AYNL103W-A 90 nt-1.6□□□□□ -2.67
SPT8P38915 YOR225WYOR225W 330 nt-1.62□□□□□ -2.67
SPT8P38915 YGL041C-BYGL041C-B 183 nt-1.63□□□□□ -2.67
SPT8P38915 YKL225WYKL225W 348 nt-1.64□□□□□ -2.67
SPT8P38915 YLR294CYLR294C 330 nt-1.65□□□□□ -2.67
SPT8P38915 YOR309CYOR309C 381 nt-1.67□□□□□ -2.68
SPT8P38915 snR61snR61 90 nt-1.71□□□□□ -2.68
SPT8P38915 snR6snR6 112 nt-1.74□□□□□ -2.69
SPT8P38915 YNL170WYNL170W 396 nt-1.74□□□□□ -2.69
SPT8P38915 YDR034C-AYDR034C-A 177 nt-1.79□□□□□ -2.7
SPT8P38915 tV(UAC)QtV(UAC)Q 76 nt-1.82□□□□□ -2.7
SPT8P38915 YOR335W-AYOR335W-A 81 nt-1.84□□□□□ -2.7
Retrieved 100 of 7,029 protein–RNA pairs in 39.2 ms