Protein–RNA interactions for Protein: P38307

DER1, Degradation in the endoplasmic reticulum protein 1, yeastyeast

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
DER1P38307 YOR381W-AYOR381W-A 168 nt-2.04□□□□□ -2.74
DER1P38307 YFL019CYFL019C 354 nt-2.05□□□□□ -2.74
DER1P38307 YLR286W-AYLR286W-A 135 nt-2.05□□□□□ -2.74
DER1P38307 YMR172C-AYMR172C-A 384 nt-2.07□□□□□ -2.74
DER1P38307 snR77snR77 88 nt-2.08□□□□□ -2.74
DER1P38307 snR81snR81 201 nt-2.09□□□□□ -2.74
DER1P38307 YBR126W-BYBR126W-B 144 nt-2.1□□□□□ -2.75
DER1P38307 YMR315W-AYMR315W-A 108 nt-2.12□□□□□ -2.75
DER1P38307 YEL014CYEL014C 306 nt-2.13□□□□□ -2.75
DER1P38307 YBR178WYBR178W 375 nt-2.13□□□□□ -2.75
DER1P38307 YDL159C-BYDL159C-B 177 nt-2.14□□□□□ -2.75
DER1P38307 YDR183C-AYDR183C-A 258 nt-2.14□□□□□ -2.75
DER1P38307 YBR182C-AYBR182C-A 195 nt-2.18□□□□□ -2.76
DER1P38307 YOR293C-AYOR293C-A 150 nt-2.22□□□□□ -2.76
DER1P38307 YOR329W-AYOR329W-A 210 nt-2.22□□□□□ -2.76
DER1P38307 YAL016C-BYAL016C-B 186 nt-2.26□□□□□ -2.77
DER1P38307 YJR157WYJR157W 363 nt-2.32□□□□□ -2.78
DER1P38307 YBR131C-AYBR131C-A 90 nt-2.34□□□□□ -2.78
DER1P38307 YPL038W-AYPL038W-A 192 nt-2.36□□□□□ -2.79
DER1P38307 YBR196C-AYBR196C-A 150 nt-2.36□□□□□ -2.79
DER1P38307 YLR299C-AYLR299C-A 93 nt-2.37□□□□□ -2.79
DER1P38307 YER181CYER181C 324 nt-2.39□□□□□ -2.79
DER1P38307 YDR543CYDR543C 300 nt-2.4□□□□□ -2.79
DER1P38307 YOR376W-AYOR376W-A 156 nt-2.41□□□□□ -2.8
DER1P38307 YPR197CYPR197C 564 nt-2.42□□□□□ -2.8
DER1P38307 tF(GAA)QtF(GAA)Q 75 nt-2.43□□□□□ -2.8
DER1P38307 YLR222C-AYLR222C-A 231 nt-2.47□□□□□ -2.8
DER1P38307 YDR413CYDR413C 576 nt-2.48□□□□□ -2.81
DER1P38307 RPL39YJL189W 156 nt-2.48□□□□□ -2.81
DER1P38307 YOR102WYOR102W 351 nt-2.48□□□□□ -2.81
DER1P38307 YOR309CYOR309C 381 nt-2.53□□□□□ -2.81
DER1P38307 YGL188C-AYGL188C-A 141 nt-2.55□□□□□ -2.82
DER1P38307 YOL166W-AYOL166W-A 156 nt-2.56□□□□□ -2.82
DER1P38307 YHR180C-BYHR180C-B 105 nt-2.58□□□□□ -2.82
DER1P38307 snR48snR48 113 nt-2.58□□□□□ -2.82
DER1P38307 snR55snR55 98 nt-2.59□□□□□ -2.82
DER1P38307 YDR157WYDR157W 402 nt-2.61□□□□□ -2.83
DER1P38307 YNL097C-BYNL097C-B 123 nt-2.62□□□□□ -2.83
DER1P38307 YOR316C-AYOR316C-A 210 nt-2.62□□□□□ -2.83
DER1P38307 YLR342W-AYLR342W-A 174 nt-2.63□□□□□ -2.83
DER1P38307 YKL118WYKL118W 312 nt-2.64□□□□□ -2.83
DER1P38307 YNL277W-AYNL277W-A 189 nt-2.64□□□□□ -2.83
DER1P38307 tL(UAA)QtL(UAA)Q 85 nt-2.66□□□□□ -2.84
DER1P38307 YKL106C-AYKL106C-A 120 nt-2.69□□□□□ -2.84
DER1P38307 YDL240C-AYDL240C-A 138 nt-2.7□□□□□ -2.84
DER1P38307 Q0142Q0142 177 nt-2.7□□□□□ -2.84
DER1P38307 YPR012WYPR012W 255 nt-2.75□□□□□ -2.85
DER1P38307 Q0017Q0017 162 nt-2.77□□□□□ -2.85
DER1P38307 YDR524W-CYDR524W-C 90 nt-2.79□□□□□ -2.86
DER1P38307 YHL015W-AYHL015W-A 84 nt-2.8□□□□□ -2.86
DER1P38307 YJL150WYJL150W 303 nt-2.83□□□□□ -2.86
DER1P38307 YOL155W-AYOL155W-A 135 nt-2.83□□□□□ -2.86
DER1P38307 snR52snR52 92 nt-2.83□□□□□ -2.86
DER1P38307 GIM4YEL003W 336 nt-2.84□□□□□ -2.86
DER1P38307 YOR302WYOR302W 78 nt-2.87□□□□□ -2.87
DER1P38307 YDR118W-AYDR118W-A 117 nt-2.93□□□□□ -2.88
DER1P38307 YOL083C-AYOL083C-A 141 nt-2.94□□□□□ -2.88
DER1P38307 YBR109W-AYBR109W-A 225 nt-2.97□□□□□ -2.88
DER1P38307 YBR296C-AYBR296C-A 120 nt-3.02□□□□□ -2.89
DER1P38307 YNL198CYNL198C 303 nt-3.03□□□□□ -2.89
DER1P38307 RPL41AYDL184C 78 nt-3.04□□□□□ -2.9
DER1P38307 snR56snR56 88 nt-3.06□□□□□ -2.9
DER1P38307 snR6snR6 112 nt-3.08□□□□□ -2.9
DER1P38307 SOM1YEL059C-A 225 nt-3.11□□□□□ -2.91
DER1P38307 YPL152W-AYPL152W-A 99 nt-3.11□□□□□ -2.91
DER1P38307 snR80snR80 171 nt-3.14□□□□□ -2.91
DER1P38307 VAR1Q0140 1197 nt-3.17□□□□□ -2.92
DER1P38307 RPL41BYDL133C-A 78 nt-3.19□□□□□ -2.92
DER1P38307 YOR335W-AYOR335W-A 81 nt-3.2□□□□□ -2.92
DER1P38307 snR65snR65 100 nt-3.21□□□□□ -2.92
DER1P38307 snR73snR73 106 nt-3.23□□□□□ -2.93
DER1P38307 snR38snR38 95 nt-3.25□□□□□ -2.93
DER1P38307 YCR095W-AYCR095W-A 159 nt-3.29□□□□□ -2.94
DER1P38307 YGR151CYGR151C 336 nt-3.42□□□□□ -2.96
DER1P38307 YBL053WYBL053W 375 nt-3.42□□□□□ -2.96
DER1P38307 YDR406W-AYDR406W-A 246 nt-3.43□□□□□ -2.96
DER1P38307 YBL071C-BYBL071C-B 99 nt-3.43□□□□□ -2.96
DER1P38307 YOL164W-AYOL164W-A 183 nt-3.46□□□□□ -2.96
DER1P38307 YJR162CYJR162C 351 nt-3.47□□□□□ -2.96
DER1P38307 YNL337WYNL337W 255 nt-3.47□□□□□ -2.96
DER1P38307 snR47snR47 99 nt-3.51□□□□□ -2.97
DER1P38307 YDR524C-AYDR524C-A 120 nt-3.52□□□□□ -2.97
DER1P38307 YBL100W-CYBL100W-C 120 nt-3.6□□□□□ -2.99
DER1P38307 YDL114W-AYDL114W-A 114 nt-3.62□□□□□ -2.99
DER1P38307 snR85snR85 171 nt-3.63□□□□□ -2.99
DER1P38307 YAL037C-AYAL037C-A 93 nt-3.67□□□□□ -3
DER1P38307 YOR231C-AYOR231C-A 201 nt-3.68□□□□□ -3
DER1P38307 tV(UAC)QtV(UAC)Q 76 nt-3.69□□□□□ -3
DER1P38307 YKL225WYKL225W 348 nt-3.79□□□□□ -3.02
DER1P38307 SPG3YDR504C 384 nt-3.85□□□□□ -3.03
DER1P38307 YHR175W-AYHR175W-A 150 nt-3.86□□□□□ -3.03
DER1P38307 tS(GCU)Q1tS(GCU)Q1 86 nt-3.88□□□□□ -3.03
DER1P38307 YCL001W-BYCL001W-B 255 nt-3.92□□□□□ -3.04
DER1P38307 snR87snR87 109 nt-4.03□□□□□ -3.05
DER1P38307 tR(ACG)Q2tR(ACG)Q2 74 nt-4.05□□□□□ -3.06
DER1P38307 YMR046W-AYMR046W-A 129 nt-4.11□□□□□ -3.07
DER1P38307 YGR122C-AYGR122C-A 129 nt-4.15□□□□□ -3.07
DER1P38307 Q0144Q0144 330 nt-4.17□□□□□ -3.08
DER1P38307 YKL096C-BYKL096C-B 150 nt-4.19□□□□□ -3.08
DER1P38307 YDL159W-AYDL159W-A 132 nt-4.25□□□□□ -3.09
Retrieved 100 of 7,029 protein–RNA pairs in 14.7 ms