Protein–RNA interactions for Protein: P38200

SHE1, Mitotic spindle-associated protein SHE1, yeastyeast

Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SHE1P38200 YOR329W-AYOR329W-A 210 nt0.09□□□□□ -2.4
SHE1P38200 EST1YLR233C 2100 nt0.07□□□□□ -2.4
SHE1P38200 snR39BsnR39B 96 nt0.06□□□□□ -2.4
SHE1P38200 THO2YNL139C 4794 nt0.06□□□□□ -2.4
SHE1P38200 YJL150WYJL150W 303 nt0.04□□□□□ -2.4
SHE1P38200 SOV1YMR066W 2697 nt0.03□□□□□ -2.4
SHE1P38200 YHL015W-AYHL015W-A 84 nt0.02□□□□□ -2.41
SHE1P38200 tM(CAU)Q1tM(CAU)Q1 76 nt0.01□□□□□ -2.41
SHE1P38200 snR128snR128 126 nt0□□□□□ -2.41
SHE1P38200 snR48snR48 113 nt0□□□□□ -2.41
SHE1P38200 YOR102WYOR102W 351 nt-0.01□□□□□ -2.41
SHE1P38200 tL(UAA)QtL(UAA)Q 85 nt-0.03□□□□□ -2.41
SHE1P38200 YGR146C-AYGR146C-A 162 nt-0.03□□□□□ -2.41
SHE1P38200 snR45snR45 172 nt-0.04□□□□□ -2.42
SHE1P38200 YNL067W-BYNL067W-B 141 nt-0.06□□□□□ -2.42
SHE1P38200 YNL198CYNL198C 303 nt-0.06□□□□□ -2.42
SHE1P38200 YDL007C-AYDL007C-A 258 nt-0.07□□□□□ -2.42
SHE1P38200 tQ(UUG)QtQ(UUG)Q 76 nt-0.07□□□□□ -2.42
SHE1P38200 YGR164WYGR164W 336 nt-0.08□□□□□ -2.42
SHE1P38200 YJL077W-AYJL077W-A 87 nt-0.08□□□□□ -2.42
SHE1P38200 RPM2YML091C 3609 nt-0.08□□□□□ -2.42
SHE1P38200 snR69snR69 101 nt-0.09□□□□□ -2.42
SHE1P38200 PMP2YEL017C-A 132 nt-0.11□□□□□ -2.43
SHE1P38200 YBL053WYBL053W 375 nt-0.11□□□□□ -2.43
SHE1P38200 YLR466C-BYLR466C-B 117 nt-0.14□□□□□ -2.43
SHE1P38200 YNL205CYNL205C 423 nt-0.15□□□□□ -2.43
SHE1P38200 YGR151CYGR151C 336 nt-0.17□□□□□ -2.44
SHE1P38200 RDS3YPR094W 324 nt-0.17□□□□□ -2.44
SHE1P38200 YPL060C-AYPL060C-A 3315 nt-0.18□□□□□ -2.44
SHE1P38200 TFB5YDR079C-A 219 nt-0.2□□□□□ -2.44
SHE1P38200 tD(GUC)QtD(GUC)Q 75 nt-0.21□□□□□ -2.44
SHE1P38200 SEC10YLR166C 2616 nt-0.21□□□□□ -2.44
SHE1P38200 SBH2YER019C-A 267 nt-0.22□□□□□ -2.44
SHE1P38200 YNL338WYNL338W 159 nt-0.22□□□□□ -2.44
SHE1P38200 YBR178WYBR178W 375 nt-0.23□□□□□ -2.45
SHE1P38200 snR50snR50 90 nt-0.24□□□□□ -2.45
SHE1P38200 YER090C-AYER090C-A 90 nt-0.25□□□□□ -2.45
SHE1P38200 YNL337WYNL337W 255 nt-0.25□□□□□ -2.45
SHE1P38200 YML100W-AYML100W-A 174 nt-0.27□□□□□ -2.45
SHE1P38200 YIL071W-AYIL071W-A 477 nt-0.28□□□□□ -2.45
SHE1P38200 SOM1YEL059C-A 225 nt-0.29□□□□□ -2.46
SHE1P38200 YLR286W-AYLR286W-A 135 nt-0.29□□□□□ -2.46
SHE1P38200 YNL266WYNL266W 420 nt-0.29□□□□□ -2.46
SHE1P38200 PAU9YBL108C-A 129 nt-0.3□□□□□ -2.46
SHE1P38200 YDL159C-BYDL159C-B 177 nt-0.31□□□□□ -2.46
SHE1P38200 YBR196C-AYBR196C-A 150 nt-0.34□□□□□ -2.46
SHE1P38200 YCR095W-AYCR095W-A 159 nt-0.36□□□□□ -2.47
SHE1P38200 Q0032Q0032 291 nt-0.4□□□□□ -2.47
SHE1P38200 tA(UGC)QtA(UGC)Q 76 nt-0.41□□□□□ -2.48
SHE1P38200 YLR299C-AYLR299C-A 93 nt-0.41□□□□□ -2.48
SHE1P38200 snR67snR67 82 nt-0.42□□□□□ -2.48
SHE1P38200 YGL007C-AYGL007C-A 87 nt-0.43□□□□□ -2.48
SHE1P38200 YJL113WYJL113W 4647 nt-0.44□□□□□ -2.48
SHE1P38200 YCL001W-BYCL001W-B 255 nt-0.46□□□□□ -2.48
SHE1P38200 URB1YKL014C 5295 nt-0.47□□□□□ -2.48
SHE1P38200 SKI7YOR076C 2244 nt-0.57□□□□□ -2.5
SHE1P38200 YML054C-AYML054C-A 159 nt-0.57□□□□□ -2.5
SHE1P38200 snR33snR33 183 nt-0.58□□□□□ -2.5
SHE1P38200 YHR180C-BYHR180C-B 105 nt-0.59□□□□□ -2.5
SHE1P38200 YLR294CYLR294C 330 nt-0.62□□□□□ -2.51
SHE1P38200 YOR225WYOR225W 330 nt-0.62□□□□□ -2.51
SHE1P38200 YHL009W-BYHL009W-B 5409 nt-0.64□□□□□ -2.51
SHE1P38200 tT(UGU)G1tT(UGU)G1 72 nt-0.64□□□□□ -2.51
SHE1P38200 tT(UGU)G2tT(UGU)G2 72 nt-0.64□□□□□ -2.51
SHE1P38200 tT(UGU)PtT(UGU)P 72 nt-0.64□□□□□ -2.51
SHE1P38200 YOL083C-AYOL083C-A 141 nt-0.65□□□□□ -2.51
SHE1P38200 snR161snR161 161 nt-0.69□□□□□ -2.52
SHE1P38200 YBL071C-BYBL071C-B 99 nt-0.72□□□□□ -2.52
SHE1P38200 tP(UGG)QtP(UGG)Q 72 nt-0.77□□□□□ -2.53
SHE1P38200 YAL037C-AYAL037C-A 93 nt-0.78□□□□□ -2.53
SHE1P38200 YOL164W-AYOL164W-A 183 nt-0.78□□□□□ -2.53
SHE1P38200 snR81snR81 201 nt-0.81□□□□□ -2.54
SHE1P38200 RPL41AYDL184C 78 nt-0.81□□□□□ -2.54
SHE1P38200 YNL170WYNL170W 396 nt-0.81□□□□□ -2.54
SHE1P38200 YBR109W-AYBR109W-A 225 nt-0.84□□□□□ -2.54
SHE1P38200 YBR296C-AYBR296C-A 120 nt-0.84□□□□□ -2.54
SHE1P38200 YBL100W-CYBL100W-C 120 nt-0.86□□□□□ -2.55
SHE1P38200 snR47snR47 99 nt-0.86□□□□□ -2.55
SHE1P38200 YNL103W-AYNL103W-A 90 nt-0.88□□□□□ -2.55
SHE1P38200 YOR376W-AYOR376W-A 156 nt-0.9□□□□□ -2.55
SHE1P38200 YGL041C-BYGL041C-B 183 nt-0.92□□□□□ -2.56
SHE1P38200 YGR240C-AYGR240C-A 201 nt-0.92□□□□□ -2.56
SHE1P38200 YKL106C-AYKL106C-A 120 nt-0.92□□□□□ -2.56
SHE1P38200 ATP8Q0080 147 nt-0.93□□□□□ -2.56
SHE1P38200 YBR223W-AYBR223W-A 120 nt-0.94□□□□□ -2.56
SHE1P38200 snR61snR61 90 nt-0.95□□□□□ -2.56
SHE1P38200 snR38snR38 95 nt-0.96□□□□□ -2.56
SHE1P38200 snR77snR77 88 nt-0.97□□□□□ -2.56
SHE1P38200 CDC65tQ(CUG)M 72 nt-0.99□□□□□ -2.57
SHE1P38200 YNR077CYNR077C 255 nt-0.99□□□□□ -2.57
SHE1P38200 tS(GCU)Q1tS(GCU)Q1 86 nt-1.03□□□□□ -2.57
SHE1P38200 YOR316C-AYOR316C-A 210 nt-1.05□□□□□ -2.58
SHE1P38200 tY(GUA)QtY(GUA)Q 84 nt-1.09□□□□□ -2.58
SHE1P38200 YMR315W-AYMR315W-A 108 nt-1.11□□□□□ -2.59
SHE1P38200 YKL225WYKL225W 348 nt-1.13□□□□□ -2.59
SHE1P38200 Q0092Q0092 141 nt-1.14□□□□□ -2.59
SHE1P38200 YDR034C-AYDR034C-A 177 nt-1.15□□□□□ -2.59
SHE1P38200 snR62snR62 100 nt-1.2□□□□□ -2.6
SHE1P38200 Q0143Q0143 153 nt-1.24□□□□□ -2.61
SHE1P38200 YOR309CYOR309C 381 nt-1.3□□□□□ -2.62
Retrieved 100 of 7,029 protein–RNA pairs in 351.2 ms