Protein–RNA interactions for Protein: P36017

VPS21, Vacuolar protein sorting-associated protein 21, yeastyeast

Known RBP Predictions only

Length 210 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS21P36017 YOR170WYOR170W 306 nt-0.68□□□□□ -2.52
VPS21P36017 snR56snR56 88 nt-0.7□□□□□ -2.52
VPS21P36017 YOL155W-AYOL155W-A 135 nt-0.7□□□□□ -2.52
VPS21P36017 RDS3YPR094W 324 nt-0.71□□□□□ -2.52
VPS21P36017 snR65snR65 100 nt-0.73□□□□□ -2.53
VPS21P36017 YGR146C-AYGR146C-A 162 nt-0.73□□□□□ -2.53
VPS21P36017 URB1YKL014C 5295 nt-0.74□□□□□ -2.53
VPS21P36017 YOR329W-AYOR329W-A 210 nt-0.74□□□□□ -2.53
VPS21P36017 PMP2YEL017C-A 132 nt-0.75□□□□□ -2.53
VPS21P36017 tR(ACG)Q2tR(ACG)Q2 74 nt-0.75□□□□□ -2.53
VPS21P36017 snR50snR50 90 nt-0.75□□□□□ -2.53
VPS21P36017 YER090C-AYER090C-A 90 nt-0.77□□□□□ -2.53
VPS21P36017 RPM2YML091C 3609 nt-0.78□□□□□ -2.53
VPS21P36017 YNL266WYNL266W 420 nt-0.79□□□□□ -2.54
VPS21P36017 YPL152W-AYPL152W-A 99 nt-0.79□□□□□ -2.54
VPS21P36017 snR33snR33 183 nt-0.79□□□□□ -2.54
VPS21P36017 snR52snR52 92 nt-0.83□□□□□ -2.54
VPS21P36017 YPL060C-AYPL060C-A 3315 nt-0.84□□□□□ -2.54
VPS21P36017 YGL188C-AYGL188C-A 141 nt-0.84□□□□□ -2.54
VPS21P36017 YNL097C-BYNL097C-B 123 nt-0.85□□□□□ -2.55
VPS21P36017 tD(GUC)QtD(GUC)Q 75 nt-0.86□□□□□ -2.55
VPS21P36017 YLR342W-AYLR342W-A 174 nt-0.86□□□□□ -2.55
VPS21P36017 YOR302WYOR302W 78 nt-0.86□□□□□ -2.55
VPS21P36017 YBR178WYBR178W 375 nt-0.87□□□□□ -2.55
VPS21P36017 snR67snR67 82 nt-0.88□□□□□ -2.55
VPS21P36017 YLR286W-AYLR286W-A 135 nt-0.89□□□□□ -2.55
VPS21P36017 YNL205CYNL205C 423 nt-0.9□□□□□ -2.55
VPS21P36017 YHL015W-AYHL015W-A 84 nt-0.91□□□□□ -2.56
VPS21P36017 JLP2YMR132C 627 nt-0.91□□□□□ -2.56
VPS21P36017 YDR524W-CYDR524W-C 90 nt-0.92□□□□□ -2.56
VPS21P36017 YOR102WYOR102W 351 nt-0.92□□□□□ -2.56
VPS21P36017 YDL159C-BYDL159C-B 177 nt-0.94□□□□□ -2.56
VPS21P36017 snR161snR161 161 nt-0.94□□□□□ -2.56
VPS21P36017 snR48snR48 113 nt-0.97□□□□□ -2.56
VPS21P36017 YOR231C-AYOR231C-A 201 nt-0.98□□□□□ -2.57
VPS21P36017 YHL009W-BYHL009W-B 5409 nt-0.99□□□□□ -2.57
VPS21P36017 YJL113WYJL113W 4647 nt-1.01□□□□□ -2.57
VPS21P36017 tL(UAA)QtL(UAA)Q 85 nt-1.01□□□□□ -2.57
VPS21P36017 snR80snR80 171 nt-1.02□□□□□ -2.57
VPS21P36017 tT(UGU)G1tT(UGU)G1 72 nt-1.02□□□□□ -2.57
VPS21P36017 tT(UGU)G2tT(UGU)G2 72 nt-1.02□□□□□ -2.57
VPS21P36017 tT(UGU)PtT(UGU)P 72 nt-1.02□□□□□ -2.57
VPS21P36017 YDR406W-AYDR406W-A 246 nt-1.04□□□□□ -2.58
VPS21P36017 YBR196C-AYBR196C-A 150 nt-1.06□□□□□ -2.58
VPS21P36017 YLR299C-AYLR299C-A 93 nt-1.07□□□□□ -2.58
VPS21P36017 SKI7YOR076C 2244 nt-1.08□□□□□ -2.58
VPS21P36017 tP(UGG)QtP(UGG)Q 72 nt-1.15□□□□□ -2.59
VPS21P36017 YML054C-AYML054C-A 159 nt-1.2□□□□□ -2.6
VPS21P36017 YNL198CYNL198C 303 nt-1.23□□□□□ -2.61
VPS21P36017 SOM1YEL059C-A 225 nt-1.26□□□□□ -2.61
VPS21P36017 YHR180C-BYHR180C-B 105 nt-1.27□□□□□ -2.61
VPS21P36017 YGR240C-AYGR240C-A 201 nt-1.34□□□□□ -2.62
VPS21P36017 YJL150WYJL150W 303 nt-1.34□□□□□ -2.62
VPS21P36017 YBL053WYBL053W 375 nt-1.35□□□□□ -2.63
VPS21P36017 YBR223W-AYBR223W-A 120 nt-1.36□□□□□ -2.63
VPS21P36017 YCR095W-AYCR095W-A 159 nt-1.4□□□□□ -2.63
VPS21P36017 YMR046W-AYMR046W-A 129 nt-1.41□□□□□ -2.64
VPS21P36017 CDC65tQ(CUG)M 72 nt-1.42□□□□□ -2.64
VPS21P36017 YOR376W-AYOR376W-A 156 nt-1.46□□□□□ -2.64
VPS21P36017 SPG3YDR504C 384 nt-1.48□□□□□ -2.65
VPS21P36017 snR77snR77 88 nt-1.49□□□□□ -2.65
VPS21P36017 YKL106C-AYKL106C-A 120 nt-1.49□□□□□ -2.65
VPS21P36017 YMR315W-AYMR315W-A 108 nt-1.49□□□□□ -2.65
VPS21P36017 Q0142Q0142 177 nt-1.5□□□□□ -2.65
VPS21P36017 snR81snR81 201 nt-1.54□□□□□ -2.66
VPS21P36017 tY(GUA)QtY(GUA)Q 84 nt-1.54□□□□□ -2.66
VPS21P36017 RPL41AYDL184C 78 nt-1.55□□□□□ -2.66
VPS21P36017 YOL083C-AYOL083C-A 141 nt-1.57□□□□□ -2.66
VPS21P36017 YGR151CYGR151C 336 nt-1.58□□□□□ -2.66
VPS21P36017 YBR296C-AYBR296C-A 120 nt-1.59□□□□□ -2.66
VPS21P36017 YOR316C-AYOR316C-A 210 nt-1.61□□□□□ -2.67
VPS21P36017 tM(CAU)Q1tM(CAU)Q1 76 nt-1.62□□□□□ -2.67
VPS21P36017 YNR077CYNR077C 255 nt-1.67□□□□□ -2.68
VPS21P36017 YBR109W-AYBR109W-A 225 nt-1.67□□□□□ -2.68
VPS21P36017 YCL001W-BYCL001W-B 255 nt-1.68□□□□□ -2.68
VPS21P36017 YLR466C-BYLR466C-B 117 nt-1.7□□□□□ -2.68
VPS21P36017 YBL071C-BYBL071C-B 99 nt-1.72□□□□□ -2.68
VPS21P36017 YBL100W-CYBL100W-C 120 nt-1.72□□□□□ -2.68
VPS21P36017 YNL338WYNL338W 159 nt-1.74□□□□□ -2.69
VPS21P36017 YOL164W-AYOL164W-A 183 nt-1.74□□□□□ -2.69
VPS21P36017 snR47snR47 99 nt-1.77□□□□□ -2.69
VPS21P36017 YAL037C-AYAL037C-A 93 nt-1.79□□□□□ -2.7
VPS21P36017 snR38snR38 95 nt-1.83□□□□□ -2.7
VPS21P36017 YOR309CYOR309C 381 nt-1.9□□□□□ -2.71
VPS21P36017 YNL337WYNL337W 255 nt-1.92□□□□□ -2.72
VPS21P36017 tS(GCU)Q1tS(GCU)Q1 86 nt-2.05□□□□□ -2.74
VPS21P36017 YKL225WYKL225W 348 nt-2.06□□□□□ -2.74
VPS21P36017 RPL41BYDL133C-A 78 nt-2.07□□□□□ -2.74
VPS21P36017 YGL041C-BYGL041C-B 183 nt-2.13□□□□□ -2.75
VPS21P36017 YDL114W-AYDL114W-A 114 nt-2.15□□□□□ -2.75
VPS21P36017 Q0032Q0032 291 nt-2.17□□□□□ -2.76
VPS21P36017 YOR335W-AYOR335W-A 81 nt-2.17□□□□□ -2.76
VPS21P36017 snR6snR6 112 nt-2.18□□□□□ -2.76
VPS21P36017 YDR034C-AYDR034C-A 177 nt-2.24□□□□□ -2.77
VPS21P36017 YNL103W-AYNL103W-A 90 nt-2.25□□□□□ -2.77
VPS21P36017 snR61snR61 90 nt-2.26□□□□□ -2.77
VPS21P36017 snR85snR85 171 nt-2.27□□□□□ -2.77
VPS21P36017 snR73snR73 106 nt-2.28□□□□□ -2.77
VPS21P36017 YBR126W-BYBR126W-B 144 nt-2.3□□□□□ -2.78
VPS21P36017 YGL007C-AYGL007C-A 87 nt-2.32□□□□□ -2.78
Retrieved 100 of 7,029 protein–RNA pairs in 27.6 ms