Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC19.89■□□□□ 0.77
HMGCLP35914 ABHD17AP6-201ENST00000458502 1044 ntBASIC19.89■□□□□ 0.77
HMGCLP35914 MOK-225ENST00000522867 1883 ntTSL 5 BASIC19.89■□□□□ 0.77
HMGCLP35914 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC19.89■□□□□ 0.77
HMGCLP35914 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC19.89■□□□□ 0.77
HMGCLP35914 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC19.89■□□□□ 0.77
HMGCLP35914 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC19.89■□□□□ 0.77
HMGCLP35914 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
HMGCLP35914 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
HMGCLP35914 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
HMGCLP35914 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC19.88■□□□□ 0.77
HMGCLP35914 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
HMGCLP35914 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
HMGCLP35914 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
HMGCLP35914 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
HMGCLP35914 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
HMGCLP35914 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
HMGCLP35914 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
HMGCLP35914 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC19.88■□□□□ 0.77
HMGCLP35914 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC19.88■□□□□ 0.77
HMGCLP35914 CD99P1-205ENST00000527459 561 ntBASIC19.88■□□□□ 0.77
HMGCLP35914 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC19.88■□□□□ 0.77
HMGCLP35914 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC19.88■□□□□ 0.77
HMGCLP35914 AC008687.6-201ENST00000596318 630 ntBASIC19.88■□□□□ 0.77
HMGCLP35914 AC120498.8-201ENST00000614275 531 ntBASIC19.88■□□□□ 0.77
HMGCLP35914 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC19.88■□□□□ 0.77
HMGCLP35914 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
HMGCLP35914 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC19.88■□□□□ 0.77
HMGCLP35914 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
HMGCLP35914 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
HMGCLP35914 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC19.88■□□□□ 0.77
HMGCLP35914 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
HMGCLP35914 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
HMGCLP35914 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
HMGCLP35914 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC19.88■□□□□ 0.77
HMGCLP35914 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
HMGCLP35914 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
HMGCLP35914 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
HMGCLP35914 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
HMGCLP35914 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC19.87■□□□□ 0.77
HMGCLP35914 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
HMGCLP35914 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
HMGCLP35914 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
HMGCLP35914 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC19.87■□□□□ 0.77
HMGCLP35914 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC19.87■□□□□ 0.77
HMGCLP35914 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
HMGCLP35914 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC19.87■□□□□ 0.77
HMGCLP35914 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
HMGCLP35914 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
HMGCLP35914 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
HMGCLP35914 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC19.87■□□□□ 0.77
HMGCLP35914 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
HMGCLP35914 KLF2-202ENST00000592003 564 ntTSL 3 BASIC19.87■□□□□ 0.77
HMGCLP35914 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
HMGCLP35914 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
HMGCLP35914 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC19.87■□□□□ 0.77
HMGCLP35914 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
HMGCLP35914 GOLGA2P11-201ENST00000562660 1621 ntBASIC19.87■□□□□ 0.77
HMGCLP35914 PHGDH-210ENST00000641115 1638 ntBASIC19.87■□□□□ 0.77
HMGCLP35914 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
HMGCLP35914 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC19.86■□□□□ 0.77
HMGCLP35914 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
HMGCLP35914 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
HMGCLP35914 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
HMGCLP35914 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
HMGCLP35914 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
HMGCLP35914 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC19.86■□□□□ 0.77
HMGCLP35914 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
HMGCLP35914 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC19.86■□□□□ 0.77
HMGCLP35914 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC19.86■□□□□ 0.77
HMGCLP35914 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC19.86■□□□□ 0.77
HMGCLP35914 MAX-217ENST00000557277 728 ntTSL 3 BASIC19.86■□□□□ 0.77
HMGCLP35914 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC19.86■□□□□ 0.77
HMGCLP35914 AC008403.3-201ENST00000598924 454 ntBASIC19.86■□□□□ 0.77
HMGCLP35914 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
HMGCLP35914 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
HMGCLP35914 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
HMGCLP35914 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
HMGCLP35914 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
HMGCLP35914 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
HMGCLP35914 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC19.85■□□□□ 0.77
HMGCLP35914 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
HMGCLP35914 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
HMGCLP35914 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC19.85■□□□□ 0.77
HMGCLP35914 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
HMGCLP35914 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
HMGCLP35914 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
HMGCLP35914 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC19.85■□□□□ 0.77
HMGCLP35914 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC19.85■□□□□ 0.77
HMGCLP35914 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC19.85■□□□□ 0.77
HMGCLP35914 AP003097.1-201ENST00000530657 1135 ntBASIC19.85■□□□□ 0.77
HMGCLP35914 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC19.85■□□□□ 0.77
HMGCLP35914 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC19.85■□□□□ 0.77
HMGCLP35914 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC19.85■□□□□ 0.77
HMGCLP35914 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC19.85■□□□□ 0.77
HMGCLP35914 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.85■□□□□ 0.77
HMGCLP35914 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
HMGCLP35914 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
HMGCLP35914 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
HMGCLP35914 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC19.85■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 14.9 ms