Protein–RNA interactions for Protein: P35729

NUP120, Nucleoporin NUP120, yeastyeast

Predictions only

Length 1,037 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
NUP120P35729 YGR146C-AYGR146C-A 162 nt0.46□□□□□ -2.34
NUP120P35729 MLP2YIL149C 5040 nt0.46□□□□□ -2.34
NUP120P35729 UTP20YBL004W 7482 nt0.45□□□□□ -2.34
NUP120P35729 YNL067W-BYNL067W-B 141 nt0.44□□□□□ -2.34
NUP120P35729 BIR1YJR089W 2865 nt0.44□□□□□ -2.34
NUP120P35729 CSE1YGL238W 2883 nt0.43□□□□□ -2.34
NUP120P35729 YKL145W-AYKL145W-A 93 nt0.4□□□□□ -2.35
NUP120P35729 YBR099CYBR099C 384 nt0.4□□□□□ -2.35
NUP120P35729 tF(GAA)BtF(GAA)B 73 nt0.39□□□□□ -2.35
NUP120P35729 tF(GAA)FtF(GAA)F 73 nt0.39□□□□□ -2.35
NUP120P35729 tF(GAA)GtF(GAA)G 73 nt0.39□□□□□ -2.35
NUP120P35729 tF(GAA)H1tF(GAA)H1 73 nt0.39□□□□□ -2.35
NUP120P35729 tF(GAA)H2tF(GAA)H2 73 nt0.39□□□□□ -2.35
NUP120P35729 tF(GAA)MtF(GAA)M 73 nt0.39□□□□□ -2.35
NUP120P35729 tF(GAA)P1tF(GAA)P1 73 nt0.39□□□□□ -2.35
NUP120P35729 tF(GAA)P2tF(GAA)P2 73 nt0.39□□□□□ -2.35
NUP120P35729 FMP27YLR454W 7887 nt0.39□□□□□ -2.35
NUP120P35729 YNL054W-BYNL054W-B 5250 nt0.38□□□□□ -2.35
NUP120P35729 YOR186C-AYOR186C-A 210 nt0.33□□□□□ -2.36
NUP120P35729 SOV1YMR066W 2697 nt0.31□□□□□ -2.36
NUP120P35729 YGR164WYGR164W 336 nt0.31□□□□□ -2.36
NUP120P35729 YNL205CYNL205C 423 nt0.31□□□□□ -2.36
NUP120P35729 YOL013W-AYOL013W-A 192 nt0.3□□□□□ -2.36
NUP120P35729 YIL071W-AYIL071W-A 477 nt0.29□□□□□ -2.36
NUP120P35729 PMP2YEL017C-A 132 nt0.28□□□□□ -2.36
NUP120P35729 EST1YLR233C 2100 nt0.28□□□□□ -2.37
NUP120P35729 snR69snR69 101 nt0.27□□□□□ -2.37
NUP120P35729 AI1Q0050 2505 nt0.26□□□□□ -2.37
NUP120P35729 YOL014WYOL014W 375 nt0.25□□□□□ -2.37
NUP120P35729 YCR095W-AYCR095W-A 159 nt0.24□□□□□ -2.37
NUP120P35729 SOM1YEL059C-A 225 nt0.24□□□□□ -2.37
NUP120P35729 YJL077W-AYJL077W-A 87 nt0.24□□□□□ -2.37
NUP120P35729 YCL001W-BYCL001W-B 255 nt0.22□□□□□ -2.37
NUP120P35729 SEC10YLR166C 2616 nt0.21□□□□□ -2.38
NUP120P35729 YNL266WYNL266W 420 nt0.18□□□□□ -2.38
NUP120P35729 THO2YNL139C 4794 nt0.15□□□□□ -2.39
NUP120P35729 RDS3YPR094W 324 nt0.15□□□□□ -2.39
NUP120P35729 tD(GUC)QtD(GUC)Q 75 nt0.14□□□□□ -2.39
NUP120P35729 YNL170WYNL170W 396 nt0.13□□□□□ -2.39
NUP120P35729 ATP8Q0080 147 nt0.12□□□□□ -2.39
NUP120P35729 YBR178WYBR178W 375 nt0.1□□□□□ -2.39
NUP120P35729 tQ(UUG)QtQ(UUG)Q 76 nt0.08□□□□□ -2.4
NUP120P35729 YER090C-AYER090C-A 90 nt0.05□□□□□ -2.4
NUP120P35729 YBR196C-AYBR196C-A 150 nt0.05□□□□□ -2.4
NUP120P35729 YER078W-AYER078W-A 165 nt0.04□□□□□ -2.4
NUP120P35729 YLR286W-AYLR286W-A 135 nt0.03□□□□□ -2.4
NUP120P35729 snR128snR128 126 nt0.02□□□□□ -2.41
NUP120P35729 Q0092Q0092 141 nt0.01□□□□□ -2.41
NUP120P35729 YDL159C-BYDL159C-B 177 nt0□□□□□ -2.41
NUP120P35729 YML100W-AYML100W-A 174 nt-0.01□□□□□ -2.41
NUP120P35729 snR50snR50 90 nt-0.02□□□□□ -2.41
NUP120P35729 snR45snR45 172 nt-0.07□□□□□ -2.42
NUP120P35729 YLR299C-AYLR299C-A 93 nt-0.08□□□□□ -2.42
NUP120P35729 snR67snR67 82 nt-0.21□□□□□ -2.44
NUP120P35729 YAL037C-AYAL037C-A 93 nt-0.23□□□□□ -2.45
NUP120P35729 YNL103W-AYNL103W-A 90 nt-0.23□□□□□ -2.45
NUP120P35729 YBL071C-BYBL071C-B 99 nt-0.23□□□□□ -2.45
NUP120P35729 YOL083C-AYOL083C-A 141 nt-0.23□□□□□ -2.45
NUP120P35729 snR81snR81 201 nt-0.24□□□□□ -2.45
NUP120P35729 TFB5YDR079C-A 219 nt-0.24□□□□□ -2.45
NUP120P35729 YML054C-AYML054C-A 159 nt-0.25□□□□□ -2.45
NUP120P35729 SBH2YER019C-A 267 nt-0.26□□□□□ -2.45
NUP120P35729 snR61snR61 90 nt-0.28□□□□□ -2.45
NUP120P35729 SKI7YOR076C 2244 nt-0.33□□□□□ -2.46
NUP120P35729 tA(UGC)QtA(UGC)Q 76 nt-0.33□□□□□ -2.46
NUP120P35729 Q0143Q0143 153 nt-0.33□□□□□ -2.46
NUP120P35729 PAU9YBL108C-A 129 nt-0.33□□□□□ -2.46
NUP120P35729 YGL041C-BYGL041C-B 183 nt-0.35□□□□□ -2.47
NUP120P35729 YHR180C-BYHR180C-B 105 nt-0.36□□□□□ -2.47
NUP120P35729 YOL164W-AYOL164W-A 183 nt-0.36□□□□□ -2.47
NUP120P35729 YJL113WYJL113W 4647 nt-0.4□□□□□ -2.47
NUP120P35729 YBR109W-AYBR109W-A 225 nt-0.46□□□□□ -2.48
NUP120P35729 YGR240C-AYGR240C-A 201 nt-0.49□□□□□ -2.49
NUP120P35729 URB1YKL014C 5295 nt-0.5□□□□□ -2.49
NUP120P35729 YBL100W-CYBL100W-C 120 nt-0.52□□□□□ -2.49
NUP120P35729 snR47snR47 99 nt-0.52□□□□□ -2.49
NUP120P35729 YBR296C-AYBR296C-A 120 nt-0.53□□□□□ -2.49
NUP120P35729 snR38snR38 95 nt-0.54□□□□□ -2.5
NUP120P35729 snR85snR85 171 nt-0.55□□□□□ -2.5
NUP120P35729 RPL41AYDL184C 78 nt-0.55□□□□□ -2.5
NUP120P35729 tS(GCU)Q1tS(GCU)Q1 86 nt-0.59□□□□□ -2.5
NUP120P35729 YHL009W-BYHL009W-B 5409 nt-0.61□□□□□ -2.51
NUP120P35729 snR62snR62 100 nt-0.64□□□□□ -2.51
NUP120P35729 YMR326CYMR326C 309 nt-0.66□□□□□ -2.52
NUP120P35729 YHR217CYHR217C 462 nt-0.67□□□□□ -2.52
NUP120P35729 snR161snR161 161 nt-0.7□□□□□ -2.52
NUP120P35729 tT(UGU)G1tT(UGU)G1 72 nt-0.71□□□□□ -2.52
NUP120P35729 tT(UGU)G2tT(UGU)G2 72 nt-0.71□□□□□ -2.52
NUP120P35729 tT(UGU)PtT(UGU)P 72 nt-0.71□□□□□ -2.52
NUP120P35729 YOR376W-AYOR376W-A 156 nt-0.72□□□□□ -2.52
NUP120P35729 YBL109WYBL109W 336 nt-0.73□□□□□ -2.53
NUP120P35729 YDR034C-AYDR034C-A 177 nt-0.74□□□□□ -2.53
NUP120P35729 YKL106C-AYKL106C-A 120 nt-0.77□□□□□ -2.53
NUP120P35729 snR33snR33 183 nt-0.77□□□□□ -2.53
NUP120P35729 YKL225WYKL225W 348 nt-0.78□□□□□ -2.53
NUP120P35729 YOR316C-AYOR316C-A 210 nt-0.87□□□□□ -2.55
NUP120P35729 YDR524C-AYDR524C-A 120 nt-0.94□□□□□ -2.56
NUP120P35729 YBR223W-AYBR223W-A 120 nt-0.95□□□□□ -2.56
NUP120P35729 YLL066W-BYLL066W-B 171 nt-0.99□□□□□ -2.57
NUP120P35729 snR64snR64 101 nt-1.02□□□□□ -2.57
Retrieved 100 of 7,029 protein–RNA pairs in 105.6 ms