Protein–RNA interactions for Protein: P34221

PTC3, Protein phosphatase 2C homolog 3, yeastyeast

Known RBP Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PTC3P34221 PMD1YER132C 5262 nt2.01□□□□□ -2.09
PTC3P34221 DNF3YMR162C 4971 nt1.99□□□□□ -2.09
PTC3P34221 FIG2YCR089W 4830 nt1.98□□□□□ -2.09
PTC3P34221 PEP1YBL017C 4740 nt1.95□□□□□ -2.1
PTC3P34221 YER090C-AYER090C-A 90 nt1.95□□□□□ -2.1
PTC3P34221 NUP192YJL039C 5052 nt1.92□□□□□ -2.1
PTC3P34221 CDC39YCR093W 6327 nt1.91□□□□□ -2.1
PTC3P34221 LAA1YJL207C 6045 nt1.9□□□□□ -2.11
PTC3P34221 CFT1YDR301W 4074 nt1.88□□□□□ -2.11
PTC3P34221 MLP2YIL149C 5040 nt1.86□□□□□ -2.11
PTC3P34221 YMR247W-AYMR247W-A 144 nt1.86□□□□□ -2.11
PTC3P34221 YMR272W-BYMR272W-B 108 nt1.86□□□□□ -2.11
PTC3P34221 YGR130CYGR130C 2451 nt1.84□□□□□ -2.11
PTC3P34221 tT(UGU)HtT(UGU)H 72 nt1.81□□□□□ -2.12
PTC3P34221 snR67snR67 82 nt1.79□□□□□ -2.12
PTC3P34221 YNL284C-BYNL284C-B 5268 nt1.78□□□□□ -2.12
PTC3P34221 YDL114W-AYDL114W-A 114 nt1.77□□□□□ -2.13
PTC3P34221 MEC1YBR136W 7107 nt1.75□□□□□ -2.13
PTC3P34221 SPT7YBR081C 3999 nt1.73□□□□□ -2.13
PTC3P34221 IRA1YBR140C 9279 nt1.72□□□□□ -2.13
PTC3P34221 YOR376W-AYOR376W-A 156 nt1.72□□□□□ -2.13
PTC3P34221 YNL054W-BYNL054W-B 5250 nt1.69□□□□□ -2.14
PTC3P34221 VPS15YBR097W 4365 nt1.68□□□□□ -2.14
PTC3P34221 YKL106C-AYKL106C-A 120 nt1.67□□□□□ -2.14
PTC3P34221 SPC110YDR356W 2835 nt1.67□□□□□ -2.14
PTC3P34221 BRR2YER172C 6492 nt1.66□□□□□ -2.14
PTC3P34221 SSK2YNR031C 4740 nt1.64□□□□□ -2.15
PTC3P34221 tV(UAC)QtV(UAC)Q 76 nt1.63□□□□□ -2.15
PTC3P34221 VAM6YDL077C 3150 nt1.63□□□□□ -2.15
PTC3P34221 YMR160WYMR160W 2451 nt1.58□□□□□ -2.16
PTC3P34221 tQ(UUG)E2tQ(UUG)E2 72 nt1.58□□□□□ -2.16
PTC3P34221 YOR192C-BYOR192C-B 5313 nt1.55□□□□□ -2.16
PTC3P34221 YPR117WYPR117W 7470 nt1.54□□□□□ -2.16
PTC3P34221 CCH1YGR217W 6120 nt1.53□□□□□ -2.16
PTC3P34221 snR40snR40 97 nt1.49□□□□□ -2.17
PTC3P34221 LTE1YAL024C 4308 nt1.47□□□□□ -2.17
PTC3P34221 IML1YJR138W 4755 nt1.45□□□□□ -2.18
PTC3P34221 RKR1YMR247C 4689 nt1.45□□□□□ -2.18
PTC3P34221 SCC2YDR180W 4482 nt1.41□□□□□ -2.18
PTC3P34221 tH(GUG)E1tH(GUG)E1 72 nt1.41□□□□□ -2.18
PTC3P34221 tH(GUG)E2tH(GUG)E2 72 nt1.41□□□□□ -2.18
PTC3P34221 tH(GUG)G1tH(GUG)G1 72 nt1.41□□□□□ -2.18
PTC3P34221 tH(GUG)G2tH(GUG)G2 72 nt1.41□□□□□ -2.18
PTC3P34221 tH(GUG)HtH(GUG)H 72 nt1.41□□□□□ -2.18
PTC3P34221 tH(GUG)KtH(GUG)K 72 nt1.41□□□□□ -2.18
PTC3P34221 tH(GUG)MtH(GUG)M 72 nt1.41□□□□□ -2.18
PTC3P34221 tV(UAC)BtV(UAC)B 74 nt1.37□□□□□ -2.19
PTC3P34221 tV(UAC)DtV(UAC)D 74 nt1.37□□□□□ -2.19
PTC3P34221 HKR1YDR420W 5409 nt1.36□□□□□ -2.19
PTC3P34221 PAU24YBR301W 363 nt1.32□□□□□ -2.2
PTC3P34221 YBL100W-BYBL100W-B 5313 nt1.32□□□□□ -2.2
PTC3P34221 BEM2YER155C 6504 nt1.27□□□□□ -2.21
PTC3P34221 BUD3YCL014W 4911 nt1.26□□□□□ -2.21
PTC3P34221 MLP1YKR095W 5628 nt1.26□□□□□ -2.21
PTC3P34221 MYO1YHR023W 5787 nt1.24□□□□□ -2.21
PTC3P34221 YOR316C-AYOR316C-A 210 nt1.23□□□□□ -2.21
PTC3P34221 snR77snR77 88 nt1.22□□□□□ -2.21
PTC3P34221 DOP1YDR141C 5097 nt1.18□□□□□ -2.22
PTC3P34221 YJR029WYJR029W 5268 nt1.17□□□□□ -2.22
PTC3P34221 IQG1YPL242C 4488 nt1.17□□□□□ -2.22
PTC3P34221 YML100W-AYML100W-A 174 nt1.15□□□□□ -2.23
PTC3P34221 SBH2YER019C-A 267 nt1.13□□□□□ -2.23
PTC3P34221 YPR137C-BYPR137C-B 5268 nt1.12□□□□□ -2.23
PTC3P34221 YOR186C-AYOR186C-A 210 nt1.11□□□□□ -2.23
PTC3P34221 UTP20YBL004W 7482 nt1.06□□□□□ -2.24
PTC3P34221 tF(GAA)BtF(GAA)B 73 nt1□□□□□ -2.25
PTC3P34221 tF(GAA)FtF(GAA)F 73 nt1□□□□□ -2.25
PTC3P34221 tF(GAA)GtF(GAA)G 73 nt1□□□□□ -2.25
PTC3P34221 tF(GAA)H1tF(GAA)H1 73 nt1□□□□□ -2.25
PTC3P34221 tF(GAA)H2tF(GAA)H2 73 nt1□□□□□ -2.25
PTC3P34221 tF(GAA)MtF(GAA)M 73 nt1□□□□□ -2.25
PTC3P34221 tF(GAA)P1tF(GAA)P1 73 nt1□□□□□ -2.25
PTC3P34221 tF(GAA)P2tF(GAA)P2 73 nt1□□□□□ -2.25
PTC3P34221 EMT1tM(CAU)D 73 nt0.95□□□□□ -2.26
PTC3P34221 EMT5tM(CAU)J1 73 nt0.95□□□□□ -2.26
PTC3P34221 EMT3tM(CAU)J2 73 nt0.95□□□□□ -2.26
PTC3P34221 EMT4tM(CAU)M 73 nt0.95□□□□□ -2.26
PTC3P34221 EMT2tM(CAU)O2 73 nt0.95□□□□□ -2.26
PTC3P34221 SOV1YMR066W 2697 nt0.92□□□□□ -2.26
PTC3P34221 ESP1YGR098C 4893 nt0.88□□□□□ -2.27
PTC3P34221 YPR159C-AYPR159C-A 102 nt0.83□□□□□ -2.28
PTC3P34221 YOL014WYOL014W 375 nt0.81□□□□□ -2.28
PTC3P34221 PAU9YBL108C-A 129 nt0.79□□□□□ -2.28
PTC3P34221 YJL113WYJL113W 4647 nt0.74□□□□□ -2.29
PTC3P34221 YKL145W-AYKL145W-A 93 nt0.74□□□□□ -2.29
PTC3P34221 THO2YNL139C 4794 nt0.74□□□□□ -2.29
PTC3P34221 FMP27YLR454W 7887 nt0.73□□□□□ -2.29
PTC3P34221 tT(AGU)BtT(AGU)B 73 nt0.73□□□□□ -2.29
PTC3P34221 tT(AGU)CtT(AGU)C 73 nt0.73□□□□□ -2.29
PTC3P34221 tT(AGU)DtT(AGU)D 73 nt0.73□□□□□ -2.29
PTC3P34221 tT(AGU)HtT(AGU)H 73 nt0.73□□□□□ -2.29
PTC3P34221 tT(AGU)I1tT(AGU)I1 73 nt0.73□□□□□ -2.29
PTC3P34221 tT(AGU)I2tT(AGU)I2 73 nt0.73□□□□□ -2.29
PTC3P34221 tT(AGU)JtT(AGU)J 73 nt0.73□□□□□ -2.29
PTC3P34221 tT(AGU)N1tT(AGU)N1 73 nt0.73□□□□□ -2.29
PTC3P34221 tT(AGU)N2tT(AGU)N2 73 nt0.73□□□□□ -2.29
PTC3P34221 tT(AGU)O1tT(AGU)O1 73 nt0.73□□□□□ -2.29
PTC3P34221 tT(AGU)O2tT(AGU)O2 73 nt0.73□□□□□ -2.29
PTC3P34221 UTP10YJL109C 5310 nt0.7□□□□□ -2.3
PTC3P34221 snR128snR128 126 nt0.69□□□□□ -2.3
Retrieved 100 of 7,029 protein–RNA pairs in 7.5 ms