Protein–RNA interactions for Protein: P32610

VMA8, V-type proton ATPase subunit D, yeastyeast

Known RBP Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VMA8P32610 tM(CAU)Q2tM(CAU)Q2 78 nt-0.52□□□□□ -2.49
VMA8P32610 YOR231C-AYOR231C-A 201 nt-0.53□□□□□ -2.49
VMA8P32610 SEC10YLR166C 2616 nt-0.54□□□□□ -2.5
VMA8P32610 YOR302WYOR302W 78 nt-0.58□□□□□ -2.5
VMA8P32610 YGR146C-AYGR146C-A 162 nt-0.6□□□□□ -2.51
VMA8P32610 URB1YKL014C 5295 nt-0.63□□□□□ -2.51
VMA8P32610 YIL071W-AYIL071W-A 477 nt-0.63□□□□□ -2.51
VMA8P32610 YML100W-AYML100W-A 174 nt-0.63□□□□□ -2.51
VMA8P32610 snR39BsnR39B 96 nt-0.63□□□□□ -2.51
VMA8P32610 YNL067W-BYNL067W-B 141 nt-0.65□□□□□ -2.51
VMA8P32610 snR69snR69 101 nt-0.67□□□□□ -2.52
VMA8P32610 tQ(UUG)QtQ(UUG)Q 76 nt-0.67□□□□□ -2.52
VMA8P32610 YJL113WYJL113W 4647 nt-0.7□□□□□ -2.52
VMA8P32610 YDL007C-AYDL007C-A 258 nt-0.7□□□□□ -2.52
VMA8P32610 YHL009W-BYHL009W-B 5409 nt-0.71□□□□□ -2.52
VMA8P32610 YOR329W-AYOR329W-A 210 nt-0.73□□□□□ -2.53
VMA8P32610 PAU9YBL108C-A 129 nt-0.74□□□□□ -2.53
VMA8P32610 tA(UGC)QtA(UGC)Q 76 nt-0.75□□□□□ -2.53
VMA8P32610 PMP2YEL017C-A 132 nt-0.75□□□□□ -2.53
VMA8P32610 YLR342W-AYLR342W-A 174 nt-0.75□□□□□ -2.53
VMA8P32610 snR48snR48 113 nt-0.76□□□□□ -2.53
VMA8P32610 RDS3YPR094W 324 nt-0.77□□□□□ -2.53
VMA8P32610 snR33snR33 183 nt-0.79□□□□□ -2.54
VMA8P32610 YER090C-AYER090C-A 90 nt-0.8□□□□□ -2.54
VMA8P32610 snR80snR80 171 nt-0.82□□□□□ -2.54
VMA8P32610 snR52snR52 92 nt-0.82□□□□□ -2.54
VMA8P32610 Q0142Q0142 177 nt-0.85□□□□□ -2.55
VMA8P32610 YNL205CYNL205C 423 nt-0.88□□□□□ -2.55
VMA8P32610 tT(UGU)G1tT(UGU)G1 72 nt-0.92□□□□□ -2.56
VMA8P32610 tT(UGU)G2tT(UGU)G2 72 nt-0.92□□□□□ -2.56
VMA8P32610 tT(UGU)PtT(UGU)P 72 nt-0.92□□□□□ -2.56
VMA8P32610 tD(GUC)QtD(GUC)Q 75 nt-0.93□□□□□ -2.56
VMA8P32610 YNL266WYNL266W 420 nt-0.93□□□□□ -2.56
VMA8P32610 YOR102WYOR102W 351 nt-0.95□□□□□ -2.56
VMA8P32610 snR50snR50 90 nt-0.96□□□□□ -2.56
VMA8P32610 tL(UAA)QtL(UAA)Q 85 nt-0.97□□□□□ -2.56
VMA8P32610 YHL015W-AYHL015W-A 84 nt-0.97□□□□□ -2.56
VMA8P32610 YDR406W-AYDR406W-A 246 nt-0.99□□□□□ -2.57
VMA8P32610 JLP2YMR132C 627 nt-1.02□□□□□ -2.57
VMA8P32610 YLR286W-AYLR286W-A 135 nt-1.03□□□□□ -2.57
VMA8P32610 snR67snR67 82 nt-1.07□□□□□ -2.58
VMA8P32610 YBR178WYBR178W 375 nt-1.08□□□□□ -2.58
VMA8P32610 YDL159C-BYDL159C-B 177 nt-1.1□□□□□ -2.59
VMA8P32610 snR161snR161 161 nt-1.1□□□□□ -2.59
VMA8P32610 tP(UGG)QtP(UGG)Q 72 nt-1.16□□□□□ -2.6
VMA8P32610 YMR046W-AYMR046W-A 129 nt-1.16□□□□□ -2.6
VMA8P32610 YNL198CYNL198C 303 nt-1.22□□□□□ -2.6
VMA8P32610 YBR196C-AYBR196C-A 150 nt-1.24□□□□□ -2.61
VMA8P32610 YBR223W-AYBR223W-A 120 nt-1.24□□□□□ -2.61
VMA8P32610 YJL150WYJL150W 303 nt-1.26□□□□□ -2.61
VMA8P32610 YLR299C-AYLR299C-A 93 nt-1.27□□□□□ -2.61
VMA8P32610 SKI7YOR076C 2244 nt-1.31□□□□□ -2.62
VMA8P32610 SPG3YDR504C 384 nt-1.33□□□□□ -2.62
VMA8P32610 tM(CAU)Q1tM(CAU)Q1 76 nt-1.38□□□□□ -2.63
VMA8P32610 YNR077CYNR077C 255 nt-1.38□□□□□ -2.63
VMA8P32610 SOM1YEL059C-A 225 nt-1.4□□□□□ -2.63
VMA8P32610 YCR095W-AYCR095W-A 159 nt-1.42□□□□□ -2.64
VMA8P32610 YML054C-AYML054C-A 159 nt-1.43□□□□□ -2.64
VMA8P32610 YBL053WYBL053W 375 nt-1.49□□□□□ -2.65
VMA8P32610 CDC65tQ(CUG)M 72 nt-1.5□□□□□ -2.65
VMA8P32610 tY(GUA)QtY(GUA)Q 84 nt-1.52□□□□□ -2.65
VMA8P32610 YGR240C-AYGR240C-A 201 nt-1.53□□□□□ -2.65
VMA8P32610 snR77snR77 88 nt-1.55□□□□□ -2.66
VMA8P32610 YHR180C-BYHR180C-B 105 nt-1.6□□□□□ -2.67
VMA8P32610 YMR315W-AYMR315W-A 108 nt-1.62□□□□□ -2.67
VMA8P32610 snR81snR81 201 nt-1.63□□□□□ -2.67
VMA8P32610 YOR376W-AYOR376W-A 156 nt-1.71□□□□□ -2.68
VMA8P32610 YLR466C-BYLR466C-B 117 nt-1.72□□□□□ -2.68
VMA8P32610 YGR151CYGR151C 336 nt-1.75□□□□□ -2.69
VMA8P32610 YKL106C-AYKL106C-A 120 nt-1.91□□□□□ -2.72
VMA8P32610 YOR316C-AYOR316C-A 210 nt-1.91□□□□□ -2.72
VMA8P32610 YCL001W-BYCL001W-B 255 nt-1.92□□□□□ -2.72
VMA8P32610 YNL338WYNL338W 159 nt-1.94□□□□□ -2.72
VMA8P32610 YBR296C-AYBR296C-A 120 nt-1.94□□□□□ -2.72
VMA8P32610 YOR309CYOR309C 381 nt-1.95□□□□□ -2.72
VMA8P32610 RPL41AYDL184C 78 nt-1.97□□□□□ -2.72
VMA8P32610 YOL083C-AYOL083C-A 141 nt-1.98□□□□□ -2.73
VMA8P32610 YBL071C-BYBL071C-B 99 nt-2.01□□□□□ -2.73
VMA8P32610 YBR109W-AYBR109W-A 225 nt-2.01□□□□□ -2.73
VMA8P32610 YAL037C-AYAL037C-A 93 nt-2.03□□□□□ -2.73
VMA8P32610 YNL337WYNL337W 255 nt-2.03□□□□□ -2.73
VMA8P32610 YOL164W-AYOL164W-A 183 nt-2.08□□□□□ -2.74
VMA8P32610 Q0032Q0032 291 nt-2.09□□□□□ -2.74
VMA8P32610 YBL100W-CYBL100W-C 120 nt-2.15□□□□□ -2.75
VMA8P32610 YBR126W-BYBR126W-B 144 nt-2.16□□□□□ -2.76
VMA8P32610 snR38snR38 95 nt-2.2□□□□□ -2.76
VMA8P32610 snR47snR47 99 nt-2.26□□□□□ -2.77
VMA8P32610 YGL007C-AYGL007C-A 87 nt-2.27□□□□□ -2.77
VMA8P32610 snR6snR6 112 nt-2.3□□□□□ -2.78
VMA8P32610 YOR335W-AYOR335W-A 81 nt-2.38□□□□□ -2.79
VMA8P32610 RPL41BYDL133C-A 78 nt-2.42□□□□□ -2.8
VMA8P32610 snR73snR73 106 nt-2.44□□□□□ -2.8
VMA8P32610 YKL225WYKL225W 348 nt-2.57□□□□□ -2.82
VMA8P32610 snR61snR61 90 nt-2.6□□□□□ -2.83
VMA8P32610 YGL041C-BYGL041C-B 183 nt-2.6□□□□□ -2.83
VMA8P32610 YDL114W-AYDL114W-A 114 nt-2.62□□□□□ -2.83
VMA8P32610 tS(GCU)Q1tS(GCU)Q1 86 nt-2.63□□□□□ -2.83
VMA8P32610 tV(UAC)QtV(UAC)Q 76 nt-2.66□□□□□ -2.84
VMA8P32610 snR85snR85 171 nt-2.68□□□□□ -2.84
VMA8P32610 YNL103W-AYNL103W-A 90 nt-2.68□□□□□ -2.84
Retrieved 100 of 7,029 protein–RNA pairs in 32.4 ms